CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA012273
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA012273
T199863_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA012273-PA
GRAS
132
530
LLHLLMAAAEALSGPHKSRELARVILVRLKEMVSHTAGANAAATNMERLAAHFTDALQGLLDGSHPVGGSGRQAAAAASHHHAGDVLTAFQMLQDMSPYMKFGHFTANQAILEAVSGDRRVHIVDYDIAEGIQWASLMQAMTSRADGVPAPHLRITAVSRSGGGGARAVQEAGRRLSAFAASIGQPFSFGQCRLDSDERFRPATVRMVKGEALVANCVLHQAAATTTIRRPTGSVASFLSGMAALGAKLVTVVEEEGEAEKDDDGDSAGDAAAAAAAGGFVRRFMEELHRYSAVWDSLEAGFPTQSRVRGLVERVILAPNIAGAVSRAYRGVDGEGRCGWGQWMRGSGFTAVPLSCFNHSQARLLLGLFNDGYTVEETGPNKIVLGWKARRLMSASVWA
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA03G12680
Oryza nivara
ONIVA03G12680
N
1.000
ORUFI03G11840
Oryza rufipogon
ORUFI03G11840
N
1.000
OGLUM03G11450
Oryza glumaepatula
OGLUM03G11450
N
0.997
ORGLA03G0111000
Oryza glaberrima
ORGLA03G0111000
N
0.987
OPUNC03G11040
Oryza punctata
OPUNC03G11040
N
0.978
OMERI03G10770
Oryza meridionalis
OMERI03G10770
N
0.970
OB03G21650
Oryza brachyantha
OB03G21650
N
0.952
LPERR03G10210
Leersia perrieri
LPERR03G10210
N
0.908
Pavir.Ib01112
Panicum virgatum
Pavir.Ib01112
N
0.892
Si040022m.g
Setaria italica
Si040022m.g
N
0.887
Traes_4AS_19FA06316
Triticum aestivum
Traes_4AS_19FA06316
N
0.881
TRIUR3_13261
Triticum urartu
TRIUR3_13261
N
0.881
BRADI1G67340
Brachypodium distachyon
BRADI1G67340
N
0.873
Pavir.Ia03522
Panicum virgatum
Pavir.Ia03522
N
0.865
GRMZM2G055263
Zea mays
GRMZM2G055263
N
0.857
Sb01g040270
Sorghum bicolor
Sb01g040270
N
0.857
Traes_4BL_CDCFB216C
Triticum aestivum
Traes_4BL_CDCFB216C
N
0.850
Traes_4DL_5B3B57371
Triticum aestivum
Traes_4DL_5B3B57371
N
0.828
OBART03G11490
Oryza barthii
OBART03G11490
N
0.714