CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA11G01850
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA11G01850
T200185_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA11G01850.1
GRAS
49
470
LIHLLLAGANFVATGDLQNANLTLEQISQHASLDGDTMQRIASYFSEALADRILRTWPGIHRALNSNRIPMVSDEILVQKLFFELLPFLKFSYILTNQAIVEAMEGEKMVHVIDLNAAGPAQWIALLQVLSARSEGPPHLKITGVHHQKEVLDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFEKLGVKTGEALAISSIMQLHSLLALDDDASRRKLPLLSKNSNAIHLQKGLLTNQNTLGDLLDGYSPSPDSASASASSSPASSSASMNSESFLNALWGLSPKVMVVTEQDFNHNCLTMMERLAEALFSYAAYFDCLESTVSRASLDRIKLEKMLFGEEIKNIIACEGCERKKRHERMDRWIQRLDFSGFANVPISYYGMLQGRRFLQTYGCEGYKMKEECGRVMMCWQERPLFFITAWT
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA01G43620
Glycine max
GLYMA01G43620
N
0.918
chr2.CM0018.90.nc
Lotus japonicus
chr2.CM0018.90.nc
N
0.822
Ca_27441
Cicer arietinum
Ca_27441
N
0.800
MTR_5g009080
Medicago truncatula
MTR_5g009080
N
0.797
chr3.CM0460.90.nd
Lotus japonicus
chr3.CM0460.90.nd
N
0.764
TCM_040833
Theobroma cacao
TCM_040833
N
0.756
Ca_11133
Cicer arietinum
Ca_11133
N
0.754
GLYMA11G10170
Glycine max
GLYMA11G10170
N
0.751
Pm012190
Prunus mume
Pm012190
N
0.745
PRUPE_ppa005243mg
Prunus persica
PRUPE_ppa005243mg
N
0.742
GLYMA12G02490
Glycine max
GLYMA12G02490
N
0.740
Gorai.006G125700
Gossypium raimondii
Gorai.006G125700
N
0.740
Ciclev10015219m.g
Citrus clementina
Ciclev10015219m.g
N
0.730
orange1.1g014413m.g
Citrus sinensis
orange1.1g014413m.g
N
0.729
evm.TU.supercontig_84.12
Carica papaya
evm.TU.supercontig_84.12
N
0.726
MTR_4g076140
Medicago truncatula
MTR_4g076140
N
0.721
Solyc12g099900.1
Solanum lycopersicum
Solyc12g099900.1
N
0.718
PGSC0003DMG400004649
Solanum tuberosum
PGSC0003DMG400004649
N
0.715
SCL3
Populus trichocarpa
POPTR_0009s05330
N
0.712
SCL3
Vitis vinifera
VIT_06s0009g02390
N
0.712
30024.m001746
Ricinus communis
30024.m001746
N
0.712
Eucgr.B03716
Eucalyptus grandis
Eucgr.B03716
N
0.710
Cla006433
Citrullus lanatus
Cla006433
N
0.707
cassava13860.valid.m1
Manihot esculenta
cassava13860.valid.m1
N
0.707
SapurV1A.0415s0050
Salix purpurea
SapurV1A.0415s0050
N
0.707
cassava31043.valid.m1
Manihot esculenta
cassava31043.valid.m1
N
0.704
Gorai.012G080500
Gossypium raimondii
Gorai.012G080500
N
0.704
PGSC0003DMG400022709
Solanum tuberosum
PGSC0003DMG400022709
N
0.701