CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OLONG_019953
(
Oryza longistaminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OLONG_019953
T200772_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_019953-R1
GRAS
3
341
IRNAERLAFYFADALSGRLACGTGAPPPAAPDARFASDELTLCYKTLNDACPYSKFAHLTANQAILEATGAATKIHIVDFGIVQGIQWAALLQALATRPEGKPTRIRITGVPSPLLGPQPAASLAATNTRLRDFAKLLGVDFEFVPLLRPVHELNKSDFLVEPDEAVAVNFMLQLYHLLGDSDELVRRVLRLAKSLSPAVVTLGEYEVSLNRAGFVDRFANALSYYRSLFESLDVAMTRDSPERARVERWMFGERIQRAVGPEEGADRTERMAGSSEWQTLMEWCGFEPVPLSNYARSQADLLLWNYDSKYKYSLVELPPAFLSLAWEKRPLLTVSAWR
Links
Other
GRAS
family TFs
Other
Oryza longistaminata
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OPUNC03G29570
Oryza punctata
OPUNC03G29570
N
0.961
OBART03G32400
Oryza barthii
OBART03G32400
N
0.943
OB03G39390
Oryza brachyantha
OB03G39390
N
0.940
ORGLA03G0407700
Oryza glaberrima
ORGLA03G0407700
N
0.891
BGIOSGA013482
Oryza indica
BGIOSGA013482
N
0.888
OGLUM02G35110
Oryza glumaepatula
OGLUM02G35110
N
0.888
ONIVA03G33890
Oryza nivara
ONIVA03G33890
N
0.888
ORUFI03G33780
Oryza rufipogon
ORUFI03G33780
N
0.888
OS03G0723000
Oryza sativa
OS03G0723000
N
0.888
OMERI03G29130
Oryza meridionalis
OMERI03G29130
N
0.883
LPERR03G26990
Leersia perrieri
LPERR03G26990
N
0.838
Pavir.J05273
Panicum virgatum
Pavir.J05273
N
0.838
MLOC_16989
Hordeum vulgare
MLOC_16989
N
0.835
TRIUR3_07891
Triticum urartu
TRIUR3_07891
N
0.823
GRMZM2G133169
Zea mays
GRMZM2G133169
N
0.817
BRADI1G10330
Brachypodium distachyon
BRADI1G10330
N
0.776
GRMZM2G104342
Zea mays
GRMZM2G104342
N
0.766
Si034954m.g
Setaria italica
Si034954m.g
N
0.765
Traes_4BS_DCA6E2BE0
Triticum aestivum
Traes_4BS_DCA6E2BE0
N
0.762
Pavir.Ia00910
Panicum virgatum
Pavir.Ia00910
N
0.761
Sb01g009740
Sorghum bicolor
Sb01g009740
N
0.746