CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI04G17630
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI04G17630
T200797_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI04G17630.1
GRAS
347
705
LLDELAAAAKATEVGNSIGAREILARLNQQLPPIGKPFLRSASYLKDALLLALADGHHAATRLTSPLDVALKLTACKSFSDLSPVLQFANFTATQALLDEIASTTASCIRVIDFDLGVGGQWASFLQELAHRYGSGGVSLPMLKLTAFVSAASHHPLELHLTQDNLSQFAADLGIPFEFNAINLDAFDPMELIAPTADEVVAVILPVGCSARTPLPAMLQLVKQLAPKIVVAIDYGSDRSDLPFSQHFLNCLQSCLRLLESLDAAGTDADAASKIERFLIQPRVEDAVLGRRRADKAIAWRTVLTSAGFAPQPLSNLAEAQADCLLKRVQVRGFHVEKRGAGLALYWQRGELVSVSAWR
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OLONG_010301
Oryza longistaminata
OLONG_010301
N
0.986
OBART04G21150
Oryza barthii
OBART04G21150
N
0.983
ONIVA06G04040
Oryza nivara
ONIVA06G04040
N
0.983
ORGLA04G0182200
Oryza glaberrima
ORGLA04G0182200
N
0.983
ORUFI04G22740
Oryza rufipogon
ORUFI04G22740
N
0.983
OS04G0555000
Oryza sativa
OS04G0555000
N
0.983
OPUNC04G18860
Oryza punctata
OPUNC04G18860
N
0.969
BGIOSGA016901
Oryza indica
BGIOSGA016901
N
0.950
OGLUM04G21070
Oryza glumaepatula
OGLUM04G21070
N
0.949
LPERR04G17210
Leersia perrieri
LPERR04G17210
N
0.897
Pavir.Ga01057
Panicum virgatum
Pavir.Ga01057
N
0.870
Sb06g024820
Sorghum bicolor
Sb06g024820
N
0.867
GRMZM5G825321
Zea mays
GRMZM5G825321
N
0.850
BRADI3G50930
Brachypodium distachyon
BRADI3G50930
N
0.831
GRMZM2G037792
Zea mays
GRMZM2G037792
N
0.827
Traes_6BL_972224088
Triticum aestivum
Traes_6BL_972224088
N
0.824
MLOC_43989
Hordeum vulgare
MLOC_43989
N
0.822
F775_27777
Aegilops tauschii
F775_27777
N
0.819
OGLUM02G27380
Oryza glumaepatula
OGLUM02G27380
N
0.819
BGIOSGA008764
Oryza indica
BGIOSGA008764
N
0.816
OBART02G26890
Oryza barthii
OBART02G26890
N
0.816
ONIVA02G29390
Oryza nivara
ONIVA02G29390
N
0.816
ORGLA02G0231600
Oryza glaberrima
ORGLA02G0231600
N
0.816
ORUFI02G28330
Oryza rufipogon
ORUFI02G28330
N
0.816
OPUNC02G24500
Oryza punctata
OPUNC02G24500
N
0.813
OS02G0663100
Oryza sativa
OS02G0663100
N
0.813
Traes_6AL_4084532FC1
Triticum aestivum
Traes_6AL_4084532FC1
N
0.810
OB04G28190
Oryza brachyantha
OB04G28190
N
0.809
OB02G34130
Oryza brachyantha
OB02G34130
N
0.802
ORUFI02G28320
Oryza rufipogon
ORUFI02G28320
N
0.788
OS02G0662700
Oryza sativa
OS02G0662700
N
0.788
TRIUR3_26732
Triticum urartu
TRIUR3_26732
N
0.786
BGIOSGA008763
Oryza indica
BGIOSGA008763
N
0.785
OGLUM02G27370
Oryza glumaepatula
OGLUM02G27370
N
0.785
ORGLA02G0231500
Oryza glaberrima
ORGLA02G0231500
N
0.785
OB02G34120
Oryza brachyantha
OB02G34120
N
0.782
OBART02G26880
Oryza barthii
OBART02G26880
N
0.782
Sb04g032570
Sorghum bicolor
Sb04g032570
N
0.782
Si016508m.g
Setaria italica
Si016508m.g
N
0.782
GRMZM2G098800
Zea mays
GRMZM2G098800
N
0.776
Sb04g032590
Sorghum bicolor
Sb04g032590
N
0.776
Pavir.Aa00854
Panicum virgatum
Pavir.Aa00854
N
0.770
Pavir.J32109
Panicum virgatum
Pavir.J32109
N
0.770
GRMZM2G110579
Zea mays
GRMZM2G110579
N
0.727