POPTR_0005s12520 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0005s12520 T201191_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s12520.1 GRAS 222 589

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.4211s0010 Salix purpurea SapurV1A.4211s0010 N 0.895
SapurV1A.0254s0130 Salix purpurea SapurV1A.0254s0130 N 0.893
SapurV1A.1131s0040 Salix purpurea SapurV1A.1131s0040 N 0.876
POPTR_0007s12760 Populus trichocarpa POPTR_0007s12760 N 0.871
29634.m002156 Ricinus communis 29634.m002156 N 0.794
cassava35611.valid.m1 Manihot esculenta cassava35611.valid.m1 N 0.788
cassava18797.valid.m1 Manihot esculenta cassava18797.valid.m1 N 0.777
TCM_000399 Theobroma cacao TCM_000399 N 0.771
evm.TU.supercontig_6.108 Carica papaya evm.TU.supercontig_6.108 N 0.763
PRUPE_ppa003124mg Prunus persica PRUPE_ppa003124mg N 0.758
Gorai.003G015400 Gossypium raimondii Gorai.003G015400 N 0.755
Lus10024014.g Linum usitatissimum Lus10024014.g N 0.755
Pm026616 Prunus mume Pm026616 N 0.752
Gorai.008G068100 Gossypium raimondii Gorai.008G068100 N 0.752
Lus10041740.g Linum usitatissimum Lus10041740.g N 0.749
MDP0000575908 Malus domestica MDP0000575908 N 0.738
PGSC0003DMG400014900 Solanum tuberosum PGSC0003DMG400014900 N 0.722
VIT_04s0023g01660 Vitis vinifera VIT_04s0023g01660 N 0.722
PK13108.1 Cannabis sativa PK13108.1 N 0.719
mgf021185m Mimulus guttatus mgf021185m N 0.716
gene14780-v1.0-hybrid Fragaria vesca gene14780-v1.0-hybrid N 0.716
Solyc02g085340.1 Solanum lycopersicum Solyc02g085340.1 N 0.714
Eucgr.I02451 Eucalyptus grandis Eucgr.I02451 N 0.713
Aquca_010_00478 Aquilegia coerulea Aquca_010_00478 N 0.708
Cucsa.127390 Cucumis sativus Cucsa.127390 N 0.705
Cucsa.201400 Cucumis sativus Cucsa.201400 N 0.702