CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PRUPE_ppa018977mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa018977mg
T201293_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ27946
GRAS
117
497
LVHLLMAVAEALTGANKSRDLARVILVRLKELVSPTDGTNMERLAAYFTEALQGLLEGAGGVQGKHLIGNGTHRDHGHHPTDVIAAFQLLQDMSPYVKFGHFTANQAILEAVVHDRRVHVLDYDIMEGIQWASLMQALVSRKDGPPTPHLRITALSRGGSGSGRRSIGTIQETGRRLTAFAASIGQPFSFHQCRLDSDETFRPSALKLVKGEALVINCMLNLPHFGYRSPDSIASFLSGAKTLNPRLVTLVEEEVRPTGDGGFVARFMDSLYHYSAVYDSLEAGFPMQSRARALVERVFLGPRIAGSLARIYRANGEVGCSWSEWLGAVGFKPMPISFANHCQAKLLLGLFNDGYRVEEVSNHRLVLGWKSRCLLSASIWT
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm004863
Prunus mume
Pm004863
N
0.986
gene11137-v1.0-hybrid
Fragaria vesca
gene11137-v1.0-hybrid
N
0.946
MDP0000319342
Malus domestica
MDP0000319342
N
0.935
MDP0000884524
Malus domestica
MDP0000884524
N
0.888
TCM_035069
Theobroma cacao
TCM_035069
N
0.848
POPTR_0005s15900
Populus trichocarpa
POPTR_0005s15900
N
0.845
orange1.1g011012m.g
Citrus sinensis
orange1.1g011012m.g
N
0.840
Ciclev10000940m.g
Citrus clementina
Ciclev10000940m.g
N
0.837
cassava44367.m1
Manihot esculenta
cassava44367.m1
N
0.834
Gorai.010G048800
Gossypium raimondii
Gorai.010G048800
N
0.823
SapurV1A.0105s0110
Salix purpurea
SapurV1A.0105s0110
N
0.823
VIT_18s0001g03310
Vitis vinifera
VIT_18s0001g03310
N
0.821
Gorai.009G244200
Gossypium raimondii
Gorai.009G244200
N
0.818
29908.m006159
Ricinus communis
29908.m006159
N
0.815
POPTR_0002s08660
Populus trichocarpa
POPTR_0002s08660
N
0.812
Eucgr.L03490
Eucalyptus grandis
Eucgr.L03490
N
0.812
evm.TU.supercontig_36.32
Carica papaya
evm.TU.supercontig_36.32
N
0.809
cassava32027.m1
Manihot esculenta
cassava32027.m1
N
0.802
SapurV1A.0010s0900
Salix purpurea
SapurV1A.0010s0900
N
0.792
Aquca_014_00175
Aquilegia coerulea
Aquca_014_00175
N
0.789
Ca_26279
Cicer arietinum
Ca_26279
N
0.782
PGSC0003DMG400012071
Solanum tuberosum
PGSC0003DMG400012071
N
0.780
Solyc11g013150.1
Solanum lycopersicum
Solyc11g013150.1
N
0.777
Lus10008316.g
Linum usitatissimum
Lus10008316.g
N
0.772
MTR_3g072710
Medicago truncatula
MTR_3g072710
N
0.766
GLYMA06G11610
Glycine max
GLYMA06G11610
N
0.759
LjT26J05.10.nc
Lotus japonicus
LjT26J05.10.nc
N
0.755
GLYMA04G43090
Glycine max
GLYMA04G43090
N
0.752
Lus10028056.g
Linum usitatissimum
Lus10028056.g
N
0.741
LjT15C06.70.nc
Lotus japonicus
LjT15C06.70.nc
N
0.738