CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb01g040270
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb01g040270
T201320_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb01g040270.1
GRAS
125
517
LLHLLMAAAEALSGQQKSRELARVILVRLKQMVSHIGDNAAVSNMERLATHFTDALQGLLDGSHPIGGVGRQAAAAASHGHLPHTGDVLTAFQMLQDMSPYMKFGHFTANQAILEAVAGDRRVHVVDYDIAEGVQWASLMQAMTSRPDGVPPPHLRITAVSRGGGGGARAVQEAGRRLAAFAASIGQPFSFGQCRLDSDERFRPATVRMVKGETLVANCVLNQAAATTTVRRPTGSVASFLAGMATLGAKVVTVVEEDQGDAEKDDEEVGGFVARFMEELHRYSAVWDSLEAGFPTQSRVRGLVERAILAPNIAGAVSRAYRASDGDGEARAGWGEWMRGNGFRAVPLSCFNHSQARLLLGLFNDGYTMEETSPNKIVLGWKARRLLSASVWA
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G055263
Zea mays
GRMZM2G055263
N
0.930
Si040022m.g
Setaria italica
Si040022m.g
N
0.922
Pavir.Ia03522
Panicum virgatum
Pavir.Ia03522
N
0.922
Pavir.Ib01112
Panicum virgatum
Pavir.Ib01112
N
0.920
OB03G21650
Oryza brachyantha
OB03G21650
N
0.886
BRADI1G67340
Brachypodium distachyon
BRADI1G67340
N
0.863
OPUNC03G11040
Oryza punctata
OPUNC03G11040
N
0.863
BGIOSGA012273
Oryza indica
BGIOSGA012273
N
0.857
OGLUM03G11450
Oryza glumaepatula
OGLUM03G11450
N
0.857
ONIVA03G12680
Oryza nivara
ONIVA03G12680
N
0.857
ORUFI03G11840
Oryza rufipogon
ORUFI03G11840
N
0.857
OMERI03G10770
Oryza meridionalis
OMERI03G10770
N
0.854
ORGLA03G0111000
Oryza glaberrima
ORGLA03G0111000
N
0.849
Traes_4AS_19FA06316
Triticum aestivum
Traes_4AS_19FA06316
N
0.849
TRIUR3_13261
Triticum urartu
TRIUR3_13261
N
0.849
Traes_4BL_CDCFB216C
Triticum aestivum
Traes_4BL_CDCFB216C
N
0.843
LPERR03G10210
Leersia perrieri
LPERR03G10210
N
0.833
Traes_4DL_5B3B57371
Triticum aestivum
Traes_4DL_5B3B57371
N
0.773