CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si025985m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si025985m.g
T201516_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si025985m
GRAS
437
810
LRTMLIHCAQSVATGDRRSGIELLRQIKQHSSPKGDATQRLAHCFAEGLEARLAGTGSQVYQSLVAQRTSVVDFLKAYKLYMVACCYMKVKFTFSTATICNAVAGRSKLHIVEYGVQHGFQYPGLLYTLAKRKGGPPEVRVTAIAVPQPGFRPAHQIEETGHRLSNCARELGVPFKFNAILAQWETVRAKDLNIDPEEVLVVNSECFWGNLMDESVLVDSPSPRDMVLNNIREMRPNVFIHSVVNGTFGAPFFLTRFREALFFYSAQFDMLDATIPRDNDERLLIERDVIGRSALNVIACEGADRVERPETYKQWLVRNHRAGLRQLPLDSEAAKVSRDKVKNYYHRDFLIDEDNRWLLLGWKGRVLYAMSSWT
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
0.732
BGIOSGA035742
Oryza indica
BGIOSGA035742
N
0.703
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
0.751
BRADI4G09197
Brachypodium distachyon
BRADI4G09197
N
0.749
F775_17625
Aegilops tauschii
F775_17625
N
0.730
GRMZM2G163427
Zea mays
GRMZM2G163427
N
0.854
GRMZM5G868355
Zea mays
GRMZM5G868355
N
0.757
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.732
MLOC_74705
Hordeum vulgare
MLOC_74705
N
0.735
OB11G28090
Oryza brachyantha
OB11G28090
N
0.716
OBART11G23670
Oryza barthii
OBART11G23670
N
0.732
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.735
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
0.738
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.732
ORUFI11G25540
Oryza rufipogon
ORUFI11G25540
N
0.736
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.732
OS11G0705200
Oryza sativa
OS11G0705200
N
0.738
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.795
Pavir.Hb00044
Panicum virgatum
Pavir.Hb00044
N
0.795
Sb05g027740
Sorghum bicolor
Sb05g027740
N
0.771
TRAES3BF026400020CFD_g
Triticum aestivum
TRAES3BF026400020CFD_g
N
0.763
Traes_4AL_FF199F127
Triticum aestivum
Traes_4AL_FF199F127
N
0.730
Traes_4BS_A79538646
Triticum aestivum
Traes_4BS_A79538646
N
0.741
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.850
Traes_4DS_F8FC0C699
Triticum aestivum
Traes_4DS_F8FC0C699
N
0.730
Traes_5DL_E275797CE
Triticum aestivum
Traes_5DL_E275797CE
N
0.816
TRIUR3_21532
Triticum urartu
TRIUR3_21532
N
0.723