CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si026116m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si026116m.g
T201518_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si026116m
GRAS
243
619
LHALLLRCAQSVSTDDRRGAQDLLAQVRRHSSATGDAAQRLAHCFAEGLEARLAGTGSRLYNSLMLQPTSAVDFLKAYQLFMAACCCKKVAFAFSNKTIFDAVAGRRRLHIVDYGIGYGFQWPGLLRGLAARHGGPPEVRITGIDLPQPGFRPAHQIDETGRRLMNCARELGVPFRFRGIAAKREAISPDDLDLGMADDDEVLVVSSLCHFRHLMDESVVAGRPSPRDQVLGNIRRMRPDVFIHGVINGGYGSTYFPTRFRELLFFCAAHFDLLDATVPRDSPERLLIERDILGRGAMNVIACEGADRVERPETYRQWQARNQRAGLRQLPLRPEVVKVVLDKVRDNYHKDFVVDEDQAWLLHRWKGRVLYGLSTWV
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA11G0190400
Oryza glaberrima
ORGLA11G0190400
N
0.751
Pavir.J39141
Panicum virgatum
Pavir.J39141
N
0.889
Pavir.J31658
Panicum virgatum
Pavir.J31658
N
0.854
TRIUR3_21533
Triticum urartu
TRIUR3_21533
N
0.719
Traes_4DS_C7C37A73D
Triticum aestivum
Traes_4DS_C7C37A73D
N
0.735
Traes_4DS_A5CD70F30
Triticum aestivum
Traes_4DS_A5CD70F30
N
0.719
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
Traes_4BS_344A932261
Triticum aestivum
Traes_4BS_344A932261
N
0.719
Traes_4BS_2EA81743E1
Triticum aestivum
Traes_4BS_2EA81743E1
N
0.724
Sb05g027785
Sorghum bicolor
Sb05g027785
N
0.803
OS11G0705900
Oryza sativa
OS11G0705900
N
0.754
ORUFI11G25560
Oryza rufipogon
ORUFI11G25560
N
0.751
BGIOSGA035743
Oryza indica
BGIOSGA035743
N
0.754
ONIVA11G23200
Oryza nivara
ONIVA11G23200
N
0.754
OGLUM11G22840
Oryza glumaepatula
OGLUM11G22840
N
0.754
OBART11G23680
Oryza barthii
OBART11G23680
N
0.754
OB11G28100
Oryza brachyantha
OB11G28100
N
0.749
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.757
GRMZM2G073823
Zea mays
GRMZM2G073823
N
0.786
F775_08285
Aegilops tauschii
F775_08285
N
0.719
F775_08284
Aegilops tauschii
F775_08284
N
0.719
BRADI4G09190
Brachypodium distachyon
BRADI4G09190
N
0.724
BRADI4G09180
Brachypodium distachyon
BRADI4G09180
N
0.735