CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc08g014030.1
(
Solanum lycopersicum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Solyc08g014030.1
T201576_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc08g014030.1.1
GRAS
30
408
APKLLHECATAISNKDSTKIHHLLWMLNELASPYGDCNQKLAFYFLQALFCKATDTGLRCYKTLTSAAEKSKSFDSSRKLILKFQEVSPWTTFGHVASNGAILEALDGENKLHIIDISNTFCTQWPTLLEALATRNDETPHLKLTVVVMESTLVKSHVMKEVAQRMEKFARLMGVPFEFNVISGLNHLKELTKESLNIKEEEALAVNCIGALRRVEVDERGAFIRMIQSLNPKVVTIVEHEADFSSTRNDFVKCFEECLRFYTLYFEMLDESFPTTSNERLVIERECSKCIVKVLACDNDIGDDQGYSERRERGNQWCERLKECFTPFTLNDDAVDDVKALLKRYKAGWSLVLPQANQESPGIYLTWREQQVVWASSWK
Links
Other
GRAS
family TFs
Other
Solanum lycopersicum
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400014615
Solanum tuberosum
PGSC0003DMG400014615
N
0.975
SapurV1A.0865s0070
Salix purpurea
SapurV1A.0865s0070
N
0.835
PK11022.1
Cannabis sativa
PK11022.1
N
0.831
POPTR_0017s05450
Populus trichocarpa
POPTR_0017s05450
N
0.775
Ciclev10020072m.g
Citrus clementina
Ciclev10020072m.g
N
0.775
PRUPE_ppa1027119mg
Prunus persica
PRUPE_ppa1027119mg
N
0.772
TCM_019978
Theobroma cacao
TCM_019978
N
0.772
Pm007259
Prunus mume
Pm007259
N
0.772
cassava11920.valid.m1
Manihot esculenta
cassava11920.valid.m1
N
0.772
POPTR_0007s01650
Populus trichocarpa
POPTR_0007s01650
N
0.758
Eucgr.A00109
Eucalyptus grandis
Eucgr.A00109
N
0.756
VIT_00s0226g00070
Vitis vinifera
VIT_00s0226g00070
N
0.755
Gorai.011G140100
Gossypium raimondii
Gorai.011G140100
N
0.755
Gorai.011G140300
Gossypium raimondii
Gorai.011G140300
N
0.755
SapurV1A.0791s0060
Salix purpurea
SapurV1A.0791s0060
N
0.753
SapurV1A.1272s0060
Salix purpurea
SapurV1A.1272s0060
N
0.753
Ca_02696
Cicer arietinum
Ca_02696
N
0.742
SapurV1A.1357s0040
Salix purpurea
SapurV1A.1357s0040
N
0.740
chr3.CM0106.470.nd
Lotus japonicus
chr3.CM0106.470.nd
N
0.738
SapurV1A.0485s0200
Salix purpurea
SapurV1A.0485s0200
N
0.732
GLYMA13G42100
Glycine max
GLYMA13G42100
N
0.731
GLYMA15G03290
Glycine max
GLYMA15G03290
N
0.725
MTR_2g099110
Medicago truncatula
MTR_2g099110
N
0.723
evm.TU.supercontig_9.323
Carica papaya
evm.TU.supercontig_9.323
N
0.717
mgf025327m
Mimulus guttatus
mgf025327m
N
0.710
Aquca_058_00064
Aquilegia coerulea
Aquca_058_00064
N
0.703