cassava7505.valid.m1 (Manihot esculenta)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 cassava7505.valid.m1 T202110_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava7505.valid.m1 GRAS 66 450

Links

Other GRAS family TFs
Other Manihot esculenta TFs

37 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
cassava32963.m1 Manihot esculenta cassava32963.m1 N 0.932
evm.TU.supercontig_6.17 Carica papaya evm.TU.supercontig_6.17 N 0.878
29661.m000923 Ricinus communis 29661.m000923 N 0.873
SapurV1A.0461s0030 Salix purpurea SapurV1A.0461s0030 N 0.867
SHR Populus trichocarpa POPTR_0012s06430 N 0.859
TCM_000801 Theobroma cacao TCM_000801 N 0.854
orange1.1g035867m.g Citrus sinensis orange1.1g035867m.g N 0.835
SHR Vitis vinifera VIT_07s0129g00030 N 0.829
Ciclev10025470m.g Citrus clementina Ciclev10025470m.g N 0.824
Gorai.003G030400 Gossypium raimondii Gorai.003G030400 N 0.823
Aquca_060_00005 Aquilegia coerulea Aquca_060_00005 N 0.816
Gorai.008G083500 Gossypium raimondii Gorai.008G083500 N 0.816
MDP0000687763 Malus domestica MDP0000687763 N 0.815
MDP0000822651 Malus domestica MDP0000822651 N 0.815
MDP0000840369 Malus domestica MDP0000840369 N 0.815
MDP0000165587 Malus domestica MDP0000165587 N 0.807
MDP0000171602 Malus domestica MDP0000171602 N 0.805
Eucgr.I00704 Eucalyptus grandis Eucgr.I00704 N 0.804
PGSC0003DMG400021444 Solanum tuberosum PGSC0003DMG400021444 N 0.802
PRUPE_ppa004454mg Prunus persica PRUPE_ppa004454mg N 0.802
Solyc02g092370.1 Solanum lycopersicum Solyc02g092370.1 N 0.802
gene05757-v1.0-hybrid Fragaria vesca gene05757-v1.0-hybrid N 0.802
Pm002381 Prunus mume Pm002381 N 0.799
Gorai.007G223500 Gossypium raimondii Gorai.007G223500 N 0.797
Cla014238 Citrullus lanatus Cla014238 N 0.780
Cucsa.103160 Cucumis sativus Cucsa.103160 N 0.778
GLYMA11G05110 Glycine max GLYMA11G05110 N 0.772
GLYMA01G40180 Glycine max GLYMA01G40180 N 0.770
PK04147.1 Cannabis sativa PK04147.1 N 0.767
chr2.CM0168.260.nc Lotus japonicus chr2.CM0168.260.nc N 0.767
Ca_02226 Cicer arietinum Ca_02226 N 0.765
MTR_5g015490 Medicago truncatula MTR_5g015490 N 0.761
GLYMA05G22460 Glycine max GLYMA05G22460 N 0.742
MTR_4g097080 Medicago truncatula MTR_4g097080 N 0.736
GLYMA17G17400 Glycine max GLYMA17G17400 N 0.731
Ca_09352 Cicer arietinum Ca_09352 N 0.709
SapurV1A.0865s0070 Salix purpurea SapurV1A.0865s0070 N 0.705