CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cucsa.127390
(
Cucumis sativus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cucsa.127390
T202131_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cucsa.127390.1
GRAS
240
609
LLKTLIECARISESEPDRAAQTLIKLKESSSEHGDPTERVAFYFMDALCRRLSLPSDSRLISCESTSDDFTLSYKALNDACPYSKFAHLTANQAILESTENASKIHIIDFGIAQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGSCPATGLFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFQIDTHETLAVNFMLQLYNLLDETPRAVLNVLQLAKSLNPKIVTLGEYEASLNRVGFLNRFKNALRHYSAVFESLDPKLPRDSNERLHLEKLLLGRQIGGLVGPESSPGSKTERMEDKEEWKKLMENSGFESVNLSHYAKSQAKILLWKYDYSSEYSLMESSPGFLSLAWNEVPIITVSSWR
Links
Other
GRAS
family TFs
Other
Cucumis sativus
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cla014426
Citrullus lanatus
Cla014426
N
0.869
TCM_000399
Theobroma cacao
TCM_000399
N
0.741
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.741
29634.m002156
Ricinus communis
29634.m002156
N
0.739
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.727
MDP0000575908
Malus domestica
MDP0000575908
N
0.727
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.722
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.722
Pm026616
Prunus mume
Pm026616
N
0.719
PK13108.1
Cannabis sativa
PK13108.1
N
0.719
Cla014744
Citrullus lanatus
Cla014744
N
0.716
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.716
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.711
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.705
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.705