evm.TU.supercontig_6.41 (Carica papaya)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 evm.TU.supercontig_6.41 T202531_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
evm.model.supercontig_6.41 GRAS 30 430

Links

Other GRAS family TFs
Other Carica papaya TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_2AS_E17243D52 Triticum aestivum Traes_2AS_E17243D52 N 0.884
TCM_000764 Theobroma cacao TCM_000764 N 0.839
Gorai.007G221900 Gossypium raimondii Gorai.007G221900 N 0.836
Ciclev10025567m.g Citrus clementina Ciclev10025567m.g N 0.796
orange1.1g043764m.g Citrus sinensis orange1.1g043764m.g N 0.796
POPTR_0007s10030 Populus trichocarpa POPTR_0007s10030 N 0.786
Gorai.007G056200 Gossypium raimondii Gorai.007G056200 N 0.783
VIT_07s0129g00340 Vitis vinifera VIT_07s0129g00340 N 0.782
Pm002406 Prunus mume Pm002406 N 0.780
gene05720-v1.0-hybrid Fragaria vesca gene05720-v1.0-hybrid N 0.780
PRUPE_ppa005079mg Prunus persica PRUPE_ppa005079mg N 0.772
MDP0000247514 Malus domestica MDP0000247514 N 0.766
PGSC0003DMG400024937 Solanum tuberosum PGSC0003DMG400024937 N 0.761
Solyc02g092570.1 Solanum lycopersicum Solyc02g092570.1 N 0.758
29661.m000901 Ricinus communis 29661.m000901 N 0.757
POPTR_0005s18920 Populus trichocarpa POPTR_0005s18920 N 0.755
SapurV1A.0116s0200 Salix purpurea SapurV1A.0116s0200 N 0.755
cassava10176.m1 Manihot esculenta cassava10176.m1 N 0.753
cassava8647.m1 Manihot esculenta cassava8647.m1 N 0.742
Aquca_042_00139 Aquilegia coerulea Aquca_042_00139 N 0.739
Eucgr.H02292 Eucalyptus grandis Eucgr.H02292 N 0.734
PK13595.1 Cannabis sativa PK13595.1 N 0.728
GLYMA05G22140 Glycine max GLYMA05G22140 N 0.715
Traes_2DS_FB1D2D1A7 Triticum aestivum Traes_2DS_FB1D2D1A7 N 0.709
Cucsa.103040 Cucumis sativus Cucsa.103040 N 0.707
MTR_4g095500 Medicago truncatula MTR_4g095500 N 0.706
chr4.CM0128.430.nc Lotus japonicus chr4.CM0128.430.nc N 0.705