CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10041740.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10041740.g
T202793_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10041740
GRAS
257
626
LLQSLLECARLSESETESAVKSLVKIRVSASEHGNPTERVAYYFSEALYNRLSKQAGESFTMFETTSEEFTLSYKSLNDACPYSKFAHLTANQAILEATETATKIHIVDFGVVQGVQWAALLQALATRSAGKPVLVRISGIPAPALGSSPAASLFATGKRLLDFAKLLDLNFEFEPILTPIQDLNESCFRVEPDEVLTVNFMLQLFNLLDETTATVETALRMAKSLNPRIVTLGEYEVSLNRIGYLTRFNNALKYYSAVFESLEPSLSRDSTERLEVERMLLGRRIAGVIGPEEPGVVQRERMEDREQWRLLMEKCGFESVALSNYAMSQAKILLWNYNYSPRYSLVESKPGFVSLAWKEVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.953
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.813
29634.m002156
Ricinus communis
29634.m002156
N
0.808
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.802
TCM_000399
Theobroma cacao
TCM_000399
N
0.771
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.771
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.758
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.758
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.749
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.749
SapurV1A.0254s0130
Salix purpurea
SapurV1A.0254s0130
N
0.741
SapurV1A.4211s0010
Salix purpurea
SapurV1A.4211s0010
N
0.741
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.737
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.736
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.730
MDP0000575908
Malus domestica
MDP0000575908
N
0.725
Bra012102
Brassica rapa
Bra012102
N
0.721
Pm026616
Prunus mume
Pm026616
N
0.717
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.716
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.714
PK13108.1
Cannabis sativa
PK13108.1
N
0.714
Bostr.0568s0096
Boechera stricta
Bostr.0568s0096
N
0.712
SCL4
Arabidopsis thaliana
AT5G66770
N
0.702
PGSC0003DMG400014900
Solanum tuberosum
PGSC0003DMG400014900
N
0.702
Cla014744
Citrullus lanatus
Cla014744
N
0.702
Eucgr.I02451
Eucalyptus grandis
Eucgr.I02451
N
0.702
Thhalv10003860m.g
Eutrema salsugineum
Thhalv10003860m.g
N
0.700