CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.1131s0040
(
Salix purpurea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
SapurV1A.1131s0040
T203169_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.1131s0040.1.p
GRAS
224
593
VLKALVECAQLVESKADQAVKSLVKFKDSVSENGGPVERVGFYFAEGLCRRVAARELDVLKNFDQTTSEEFTLSYKALNDACPYSKFAHLTANQAILEATEKASKIHIVDFGIVQGVQWAALLQALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDFAKLLDLNFEFEPILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLDESPVAVETALKMAKSLNPKIVTLGEYEVCLNRVGYLTRFKNALRYYTAVFESLEPNLSRDSPERLRVERLLLGHRISSVVGPEEPGVRRERMEDKDQWGALMESSGFESVSLSHYATSQAKILLWNYNYSALYSIDDSQPGFLTLAWNDVPLLTVSSWR
SapurV1A.1131s0040.2.p
GRAS
224
593
VLKALVECAQLVESKADQAVKSLVKFKDSVSENGGPVERVGFYFAEGLCRRVAARELDVLKNFDQTTSEEFTLSYKALNDACPYSKFAHLTANQAILEATEKASKIHIVDFGIVQGVQWAALLQALATRSAGKPVRIRISGIPAPVLGKNPAASLLATGNRLLDFAKLLDLNFEFEPILTPIQELNESCFRVEPDEVLAVNFMLQLYNLLDESPVAVETALKMAKSLNPKIVTLGEYEVCLNRVGYLTRFKNALRYYTAVFESLEPNLSRDSPERLRVERLLLGHRISSVVGPEEPGVRRERMEDKDQWGALMESSGFESVSLSHYATSQAKILLWNYNYSALYSIDDSQPGFLTLAWNDVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Salix purpurea
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.917
SapurV1A.0254s0130
Salix purpurea
SapurV1A.0254s0130
N
0.879
SapurV1A.4211s0010
Salix purpurea
SapurV1A.4211s0010
N
0.879
POPTR_0005s12520
Populus trichocarpa
POPTR_0005s12520
N
0.876
29634.m002156
Ricinus communis
29634.m002156
N
0.786
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.782
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.777
TCM_000399
Theobroma cacao
TCM_000399
N
0.769
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.760
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.760
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.758
Pm026616
Prunus mume
Pm026616
N
0.755
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.755
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.755
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.749
MDP0000575908
Malus domestica
MDP0000575908
N
0.738
PK13108.1
Cannabis sativa
PK13108.1
N
0.736
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.734
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.730
Cla014744
Citrullus lanatus
Cla014744
N
0.711
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.711
chr3.CM0127.460.nc
Lotus japonicus
chr3.CM0127.460.nc
N
0.711
PGSC0003DMG400014900
Solanum tuberosum
PGSC0003DMG400014900
N
0.702