AC235534.1_FG007 (Zea mays)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 AC235534.1_FG007 T204018_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.619 0.732
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.619 0.732
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.605 0.732
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.605 0.732
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.603 0.732
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AC235534.1_FGP007 Homeodomain 137 192

Links

Other Homeodomain family TFs
Other Zea mays TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.0352s0025 Capsella grandiflora Cagra.0352s0025 I 0.736
Carubv10022676m.g Capsella rubella Carubv10022676m.g I 0.736
HDG3 Arabidopsis thaliana AT2G32370 I 0.733
Bostr.23794s0877 Boechera stricta Bostr.23794s0877 I 0.733
Sb06g025750 Sorghum bicolor Sb06g025750 N 0.725
Bra008562 Brassica rapa Bra008562 I 0.723
Cla014693 Citrullus lanatus Cla014693 I 0.722
Cucsa.045360 Cucumis sativus Cucsa.045360 I 0.722
Aquca_012_00126 Aquilegia coerulea Aquca_012_00126 I 0.718
POPTR_0012s13390 Populus trichocarpa POPTR_0012s13390 I 0.690
POPTR_0015s13340 Populus trichocarpa POPTR_0015s13340 I 0.690
SapurV1A.0068s0140 Salix purpurea SapurV1A.0068s0140 I 0.690
VIT_04s0079g00480 Vitis vinifera VIT_04s0079g00480 I 0.677
MDP0000204639 Malus domestica MDP0000204639 I 0.642
MTR_7g427700 Medicago truncatula MTR_7g427700 N 0.639
MTR_7g427710 Medicago truncatula MTR_7g427710 N 0.639
Cla015702 Citrullus lanatus Cla015702 N 0.636
Cucsa.359250 Cucumis sativus Cucsa.359250 N 0.636
PDK_20s1385771g001 Phoenix dactylifera PDK_20s1385771g001 I 0.629
HDG11 Arabidopsis thaliana AT1G73360 D 0.619
Bostr.10273s0021 Boechera stricta Bostr.10273s0021 I 0.619
Cagra.4894s0014 Capsella grandiflora Cagra.4894s0014 I 0.619
Carubv10021491m.g Capsella rubella Carubv10021491m.g I 0.619
SELMODRAFT_450553 Selaginella moellendorffii SELMODRAFT_450553 I 0.613
SELMODRAFT_450554 Selaginella moellendorffii SELMODRAFT_450554 I 0.613
Gorai.008G293300 Gossypium raimondii Gorai.008G293300 I 0.611
Bo6g116760 Brassica oleracea Bo6g116760 I 0.610
Bra015996 Brassica rapa Bra015996 I 0.610
SELMODRAFT_140884 Selaginella moellendorffii SELMODRAFT_140884 I 0.610
SELMODRAFT_230527 Selaginella moellendorffii SELMODRAFT_230527 I 0.610
Thhalv10018189m.g Eutrema salsugineum Thhalv10018189m.g I 0.610
Bo6g087810 Brassica oleracea Bo6g087810 I 0.609
BGIOSGA014527 Oryza indica BGIOSGA014527 I 0.607
BRADI3G57567 Brachypodium distachyon BRADI3G57567 I 0.607
F775_07138 Aegilops tauschii F775_07138 I 0.607
GRMZM2G026643 Zea mays GRMZM2G026643 I 0.607
GRMZM2G126646 Zea mays GRMZM2G126646 I 0.607
GRMZM2G145690 Zea mays GRMZM2G145690 I 0.607
MLOC_15014 Hordeum vulgare MLOC_15014 I 0.607
OBART04G22070 Oryza barthii OBART04G22070 I 0.607
OGLUM04G22100 Oryza glumaepatula OGLUM04G22100 I 0.607
OMERI04G18610 Oryza meridionalis OMERI04G18610 I 0.607
ONIVA04G20660 Oryza nivara ONIVA04G20660 I 0.607
OPUNC04G19830 Oryza punctata OPUNC04G19830 I 0.607
ORGLA04G0191300 Oryza glaberrima ORGLA04G0191300 I 0.607
ORUFI04G23720 Oryza rufipogon ORUFI04G23720 I 0.607
OS04G0569100 Oryza sativa OS04G0569100 I 0.607
Sb03g008090 Sorghum bicolor Sb03g008090 I 0.607
Sb04g034580 Sorghum bicolor Sb04g034580 I 0.607
Si000344m.g Setaria italica Si000344m.g I 0.607
Si009396m.g Setaria italica Si009396m.g I 0.607
Si016483m.g Setaria italica Si016483m.g I 0.607
Traes_6DL_8D95F127B Triticum aestivum Traes_6DL_8D95F127B I 0.607
Pavir.Aa00335 Panicum virgatum Pavir.Aa00335 I 0.607
Pavir.Eb00587 Panicum virgatum Pavir.Eb00587 I 0.607
Pavir.Ga00993 Panicum virgatum Pavir.Ga00993 I 0.607
Pavir.Gb01032 Panicum virgatum Pavir.Gb01032 I 0.607
Pavir.J34398 Panicum virgatum Pavir.J34398 I 0.607
HDG1 Arabidopsis thaliana AT3G61150 D 0.605
HDG1 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5002090 I 0.605
OB04G29090 Oryza brachyantha OB04G29090 I 0.605
Bostr.13158s0105 Boechera stricta Bostr.13158s0105 I 0.605
Cagra.3373s0039 Capsella grandiflora Cagra.3373s0039 I 0.605
Carubv10016704m.g Capsella rubella Carubv10016704m.g I 0.605
Thhalv10005786m.g Eutrema salsugineum Thhalv10005786m.g I 0.605
GLYMA09G29810 Glycine max GLYMA09G29810 I 0.603
GLYMA16G34350 Glycine max GLYMA16G34350 I 0.603
GSMUA_Achr10G25900_001 Musa acuminata GSMUA_Achr10G25900_001 I 0.603
GSMUA_Achr2G15140_001 Musa acuminata GSMUA_Achr2G15140_001 I 0.603
GSMUA_Achr5G14100_001 Musa acuminata GSMUA_Achr5G14100_001 I 0.603
GSMUA_Achr7G11310_001 Musa acuminata GSMUA_Achr7G11310_001 I 0.603
POPTR_0015s05050 Populus trichocarpa POPTR_0015s05050 I 0.603
PRUPE_ppa015345m2g Prunus persica PRUPE_ppa015345m2g I 0.603
TCM_044944 Theobroma cacao TCM_044944 I 0.603
Cla018935 Citrullus lanatus Cla018935 I 0.603
Pm025254 Prunus mume Pm025254 I 0.603
Cucsa.112320 Cucumis sativus Cucsa.112320 I 0.603
mgf001299m Mimulus guttatus mgf001299m I 0.603
Aquca_091_00087 Aquilegia coerulea Aquca_091_00087 I 0.603
Lus10031321.g Linum usitatissimum Lus10031321.g I 0.603
Lus10031892.g Linum usitatissimum Lus10031892.g I 0.603
SapurV1A.0649s0040 Salix purpurea SapurV1A.0649s0040 I 0.603
PK24181.1 Cannabis sativa PK24181.1 D 0.603
Eucgr.H00609 Eucalyptus grandis Eucgr.H00609 I 0.602
AMTR_s00024p00094630 Amborella trichopoda AMTR_s00024p00094630 I 0.601
Bo6g077480 Brassica oleracea Bo6g077480 I 0.601
Bra003439 Brassica rapa Bra003439 I 0.601
GSMUA_Achr6G05990_001 Musa acuminata GSMUA_Achr6G05990_001 I 0.601
MTR_6g477820 Medicago truncatula MTR_6g477820 I 0.601
Solyc03g098200.2 Solanum lycopersicum Solyc03g098200.2 I 0.601
VIT_17s0053g00780 Vitis vinifera VIT_17s0053g00780 I 0.601
Ca_18028 Cicer arietinum Ca_18028 I 0.601
Eucgr.F03040 Eucalyptus grandis Eucgr.F03040 I 0.600
Ciclev10019153m.g Citrus clementina Ciclev10019153m.g I 0.599
evm.TU.supercontig_7.137 Carica papaya evm.TU.supercontig_7.137 I 0.599
gene09297-v1.0-hybrid Fragaria vesca gene09297-v1.0-hybrid I 0.599
Lus10005759.g Linum usitatissimum Lus10005759.g I 0.599
Lus10027437.g Linum usitatissimum Lus10027437.g I 0.599
LjSGA_091885.1 Lotus japonicus LjSGA_091885.1 I 0.599