Bo7g107550 (Brassica oleracea)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bo7g107550 T204970_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.865 0.982
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.865 0.982
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.855 0.982
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.855 0.982
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.841 0.789
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.825 0.772
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.825 0.772
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.804 0.772
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.804 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.804 0.684
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.786 0.789
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.786 0.789
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.786 0.789
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.744 0.719
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.744 0.719
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo7g107550.1 Homeodomain 63 119

Links

Other Homeodomain family TFs
Other Brassica oleracea TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_204681 Agaricus bisporus AGABI2DRAFT_204681 N
AGABI2DRAFT_194007 Agaricus bisporus AGABI2DRAFT_194007 N
CERSUDRAFT_94391 Ceriporiopsis subvermispora CERSUDRAFT_94391 N
CC1G_08004 Coprinopsis cinerea CC1G_08004 N
FIBRA_01765 Fibroporia radiculosa FIBRA_01765 N
FOMPIDRAFT_1027511 Fomitopsis pinicola FOMPIDRAFT_1027511 N
FOMPIDRAFT_112416 Fomitopsis pinicola FOMPIDRAFT_112416 N
GALMADRAFT_156783 Galerina marginata GALMADRAFT_156783 N
GLOTRDRAFT_43577 Gloeophyllum trabeum GLOTRDRAFT_43577 N
GLOTRDRAFT_44070 Gloeophyllum trabeum GLOTRDRAFT_44070 N
GYMLUDRAFT_181224 Gymnopus luxurians GYMLUDRAFT_181224 N
M413DRAFT_170047 Hebeloma cylindrosporum M413DRAFT_170047 N
HETIRDRAFT_317558 Heterobasidion irregulare HETIRDRAFT_317558 N
HYDPIDRAFT_137903 Hydnomerulius pinastri HYDPIDRAFT_137903 N
HYDPIDRAFT_181816 Hydnomerulius pinastri HYDPIDRAFT_181816 N
JAAARDRAFT_207038 Jaapia argillacea JAAARDRAFT_207038 N
JAAARDRAFT_66445 Jaapia argillacea JAAARDRAFT_66445 N
K443DRAFT_671578 Laccaria amethystina K443DRAFT_671578 N
K443DRAFT_672954 Laccaria amethystina K443DRAFT_672954 N
LACBIDRAFT_316437 Laccaria bicolor LACBIDRAFT_316437 N
MPER_15625 Moniliophthora perniciosa MPER_15625 N
Moror_5897 Moniliophthora roreri Moror_5897 N
Moror_6337 Moniliophthora roreri Moror_6337 N
PAXRUDRAFT_316341 Paxillus rubicundulus PAXRUDRAFT_316341 N
PHACADRAFT_262581 Phanerochaete carnosa PHACADRAFT_262581 N
PHACADRAFT_146309 Phanerochaete carnosa PHACADRAFT_146309 N
fgenesh1_pg.C_scaffold_8000526 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000526 N
fgenesh1_pg.C_scaffold_8000500 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000500 N
PHLGIDRAFT_127046 Phlebiopsis gigantea PHLGIDRAFT_127046 N
PHLGIDRAFT_80941 Phlebiopsis gigantea PHLGIDRAFT_80941 N
PILCRDRAFT_672544 Piloderma croceum PILCRDRAFT_672544 N
PILCRDRAFT_821899 Piloderma croceum PILCRDRAFT_821899 N
PISMIDRAFT_679206 Pisolithus microcarpus PISMIDRAFT_679206 N
PISMIDRAFT_674680 Pisolithus microcarpus PISMIDRAFT_674680 N
M404DRAFT_141478 Pisolithus tinctorius M404DRAFT_141478 N
M404DRAFT_853889 Pisolithus tinctorius M404DRAFT_853889 N
PLEOSDRAFT_1104780 Pleurotus ostreatus PLEOSDRAFT_1104780 N
SCHCODRAFT_236631 Schizophyllum commune SCHCODRAFT_236631 N
SCHCODRAFT_81806 Schizophyllum commune SCHCODRAFT_81806 N
SCLCIDRAFT_1212689 Scleroderma citrinum SCLCIDRAFT_1212689 N
SCLCIDRAFT_1222770 Scleroderma citrinum SCLCIDRAFT_1222770 N
SERLA73DRAFT_163336 Serpula lacrymans SERLA73DRAFT_163336 N
CY34DRAFT_92559 Suillus luteus CY34DRAFT_92559 N
CY34DRAFT_810199 Suillus luteus CY34DRAFT_810199 N
CY34DRAFT_799919 Suillus luteus CY34DRAFT_799919 N