Bra008975 (Brassica rapa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bra008975 T205063_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra008975.1-P Homeodomain 232 285

Links

Other Homeodomain family TFs
Other Brassica rapa TFs

49 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g171420 Brassica oleracea Bo9g171420 N 0.867
Thhalv10013990m.g Eutrema salsugineum Thhalv10013990m.g N 0.867
OCP3 Arabidopsis thaliana AT5G11270 N 0.856
OCP3 Arabidopsis lyrata fgenesh2_kg.6__1093__AT5G11270.1 N 0.856
Cagra.7526s0026 Capsella grandiflora Cagra.7526s0026 N 0.856
Carubv10002492m.g Capsella rubella Carubv10002492m.g N 0.856
Bostr.23997s0022 Boechera stricta Bostr.23997s0022 N 0.843
PK00680.1 Cannabis sativa PK00680.1 N 0.777
Aquca_001_00810 Aquilegia coerulea Aquca_001_00810 N 0.738
Gorai.004G274200 Gossypium raimondii Gorai.004G274200 N 0.726
evm.TU.supercontig_115.10 Carica papaya evm.TU.supercontig_115.10 N 0.725
chr1.CM0442.170.nd Lotus japonicus chr1.CM0442.170.nd N 0.716
GSMUA_Achr7G08370_001 Musa acuminata GSMUA_Achr7G08370_001 N 0.705
GLYMA04G07230 Glycine max GLYMA04G07230 N 0.700
GLYMA06G07330 Glycine max GLYMA06G07330 N 0.700
Ciclev10010768m.g Citrus clementina Ciclev10010768m.g N 0.699
orange1.1g040593m.g Citrus sinensis orange1.1g040593m.g N 0.699
Solyc08g061140.2 Solanum lycopersicum Solyc08g061140.2 N 0.697
Cla021272 Citrullus lanatus Cla021272 N 0.695
Cucsa.310460 Cucumis sativus Cucsa.310460 N 0.695
PRUPE_ppa007560mg Prunus persica PRUPE_ppa007560mg N 0.690
Pm004594 Prunus mume Pm004594 N 0.690
PGSC0003DMG400020785 Solanum tuberosum PGSC0003DMG400020785 N 0.689
TCM_038389 Theobroma cacao TCM_038389 N 0.682
OCP3 Vitis vinifera VIT_04s0008g05190 N 0.682
MDP0000119866 Malus domestica MDP0000119866 N 0.681
MDP0000202143 Malus domestica MDP0000202143 N 0.670
29848.m004652 Ricinus communis 29848.m004652 N 0.661
cassava18449.valid.m1 Manihot esculenta cassava18449.valid.m1 N 0.661
gene11668-v1.0-hybrid Fragaria vesca gene11668-v1.0-hybrid N 0.652
Lus10002029.g Linum usitatissimum Lus10002029.g N 0.634
MLOC_45474 Hordeum vulgare MLOC_45474 N 0.629
Traes_7AL_0FFE02C4C Triticum aestivum Traes_7AL_0FFE02C4C N 0.629
Traes_7BL_E2E7AA383 Triticum aestivum Traes_7BL_E2E7AA383 N 0.629
Traes_7DL_613F5240E Triticum aestivum Traes_7DL_613F5240E N 0.629
OMERI06G20820 Oryza meridionalis OMERI06G20820 N 0.627
OPUNC06G18430 Oryza punctata OPUNC06G18430 N 0.627
BGIOSGA023211 Oryza indica BGIOSGA023211 N 0.625
OB06G27850 Oryza brachyantha OB06G27850 N 0.625
OBART06G20210 Oryza barthii OBART06G20210 N 0.625
OGLUM06G21270 Oryza glumaepatula OGLUM06G21270 N 0.625
OLONG_013537 Oryza longistaminata OLONG_013537 N 0.625
ONIVA06G23990 Oryza nivara ONIVA06G23990 N 0.625
ORUFI06G21620 Oryza rufipogon ORUFI06G21620 N 0.625
OS06G0601000 Oryza sativa OS06G0601000 N 0.625
Lus10002899.g Linum usitatissimum Lus10002899.g N 0.622
MTR_3g107530 Medicago truncatula MTR_3g107530 N 0.621
BRADI1G58817 Brachypodium distachyon BRADI1G58817 N 0.615
SapurV1A.0043s0520 Salix purpurea SapurV1A.0043s0520 N 0.602