BRADI3G23370 (Brachypodium distachyon)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 BRADI3G23370 T205252_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G23370.1 Homeodomain 182 226

Links

Other Homeodomain family TFs
Other Brachypodium distachyon TFs

249 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.843
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.821
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.821
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.821
cassava13400.valid.m1 Manihot esculenta cassava13400.valid.m1 N 0.811
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.809
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.809
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.809
mgf006959m Mimulus guttatus mgf006959m N 0.809
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.799
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.799
MDP0000690933 Malus domestica MDP0000690933 N 0.799
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.789
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.789
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.789
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.789
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.782
F775_10961 Aegilops tauschii F775_10961 N 0.778
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.775
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.774
TCM_016582 Theobroma cacao TCM_016582 I 0.767
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.767
Ca_08015 Cicer arietinum Ca_08015 N 0.761
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.751
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.749
OS01G0788800 Oryza sativa OS01G0788800 N 0.749
OMERI08G08060 Oryza meridionalis OMERI08G08060 N 0.740
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N 0.732
gene25833-v1.0-hybrid Fragaria vesca gene25833-v1.0-hybrid N 0.732
TRIUR3_32002 Triticum urartu TRIUR3_32002 N 0.726
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.724
Traes_3AL_F42853DA5 Triticum aestivum Traes_3AL_F42853DA5 N 0.718
TRAES3BF096700010CFD_g Triticum aestivum TRAES3BF096700010CFD_g N 0.713
TRIUR3_29318 Triticum urartu TRIUR3_29318 N 0.705
Bo1g131210 Brassica oleracea Bo1g131210 N 0.701
TRAES3BF096700040CFD_g Triticum aestivum TRAES3BF096700040CFD_g N 0.697
Ocbimv22024994m.g Octopus bimaculoides Ocbimv22024994m.g N 0.692
csin109617 Clonorchis sinensis csin109617 N 0.688
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0 N 0.687
PGSC0003DMG400007775 Solanum tuberosum PGSC0003DMG400007775 N 0.685
ENSOCUG00000013528 Oryctolagus cuniculus ENSOCUG00000013528 I 0.682
nRc.2.0.1.g21365 Romanomermis culicivorax nRc.2.0.1.g21365 N 0.680
GI23625 Drosophila mojavensis FBgn0146351 N 0.676
scaffold61-EXSNAP2012.75 Pristionchus exspectatus scaffold61-EXSNAP2012.75 N 0.674
Minc02159 Meloidogyne incognita Minc02159 N 0.672
ACAC_0000093601 Angiostrongylus cantonensis ACAC_0000093601 N 0.672
ACOC_0000334101 Angiostrongylus costaricensis ACOC_0000334101 N 0.672
Ca_19697 Cicer arietinum Ca_19697 N 0.671
ENSPTRG00000017522 Pan troglodytes ENSPTRG00000017522 N 0.670
TLX3 Taeniopygia guttata ENSTGUG00000014966 N 0.670
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.670
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.670
SMTD_0001030501 Schistosoma mattheei SMTD_0001030501 N 0.670
PPA28666 Pristionchus pacificus PPA28666 N 0.666
ISCW010454 Ixodes scapularis ISCW010454 N 0.664
SINV22981 Solenopsis invicta SINV22981 N 0.664
YQE_10731 Dendroctonus ponderosae YQE_10731 N 0.664
YQE_12889 Dendroctonus ponderosae YQE_12889 N 0.664
AEPI010666 Anopheles epiroticus AEPI010666 N 0.663
AQUA015309 Anopheles quadriannulatus AQUA015309 N 0.663
VAX1 Loxodonta africana ENSLAFG00000018107 N 0.658
ENSSHAG00000009294 Sarcophilus harrisii ENSSHAG00000009294 I 0.658
TRIUR3_33331 Triticum urartu TRIUR3_33331 N 0.655
ENSTRUG00000017602 Takifugu rubripes ENSTRUG00000017602 N 0.654
nRc.2.0.1.g08298 Romanomermis culicivorax nRc.2.0.1.g08298 N 0.652
EMX1 Oryctolagus cuniculus ENSOCUG00000008208 N 0.650
HelroG192586 Helobdella robusta HelroG192586 N 0.650
PHUM118950 Pediculus humanus PHUM118950 N 0.650
LDEC017208 Leptinotarsa decemlineata LDEC017208 N 0.650
AFAF006159 Anopheles farauti AFAF006159 I 0.649
SNAPOd2T00015975001 Oikopleura dioica SNAPOd2T00015975001 N 0.645
ACEP22770 Atta cephalotes ACEP22770 N 0.644
ACYPI086517 Acyrthosiphon pisum ACYPI086517 N 0.644
tlx2 Danio rerio ENSDARG00000011273 I 0.644
NKX6-1 Homo sapiens ENSG00000163623 D 0.644
Tlx1 Mus musculus ENSMUSG00000025215 I 0.644
ENSOARG00000003161 Ovis aries ENSOARG00000003161 I 0.644
VAX2 Sus scrofa ENSSSCG00000008318 N 0.644
ENSTNIG00000016273 Tetraodon nigroviridis ENSTNIG00000016273 I 0.644
ENSXMAG00000003902 Xiphophorus maculatus ENSXMAG00000003902 I 0.644
ISCW012145 Ixodes scapularis ISCW012145 N 0.644
KGM_17085 Danaus plexippus KGM_17085 N 0.644
MCINX004708 Melitaea cinxia MCINX004708 N 0.644
MESCA006388 Megaselia scalaris MESCA006388 N 0.644
PHUM359880 Pediculus humanus PHUM359880 N 0.644
PHUM359910 Pediculus humanus PHUM359910 N 0.644
RPRC003713 Rhodnius prolixus RPRC003713 N 0.644
Cmyd_10007464 Chelonia mydas Cmyd_10007464 I 0.644
LDEC009173 Leptinotarsa decemlineata LDEC009173 N 0.644
Sjc_0085440 Schistosoma japonicum Sjc_0085440 N 0.644
SMU15011671 Schmidtea mediterranea SMU15011671 I 0.644
nkx6-1 Xenopus tropicalis XB-GENE-483574 I 0.644
ACUA011088 Anopheles culicifacies ACUA011088 N 0.644
AEPI002733 Anopheles epiroticus AEPI002733 N 0.644
AMAM008009 Anopheles maculatus AMAM008009 N 0.644
PPAI004705 Phlebotomus papatasi PPAI004705 N 0.644
PPAI006607 Phlebotomus papatasi PPAI006607 I 0.644
BTMF_0001416601 Brugia timori BTMF_0001416601 N 0.644
nDi.2.2.2.g10664 Dirofilaria immitis nDi.2.2.2.g10664 I 0.644
PXEA_0003635301 Protopolystoma xenopodis PXEA_0003635301 N 0.644
SPER_0001142801 Spirometra erinaceieuropaei SPER_0001142801 I 0.644
TCLT_0000655201 Thelazia callipaeda TCLT_0000655201 I 0.644
TRE_0000385401 Trichobilharzia regenti TRE_0000385401 N 0.644
ENSOARG00000010209 Ovis aries ENSOARG00000010209 N 0.640
ENSPVAG00000007998 Pteropus vampyrus ENSPVAG00000007998 N 0.638
GPUH_0000797801 Gongylonema pulchrum GPUH_0000797801 N 0.637
TCNE_0000505101 Toxocara canis TCNE_0000505101 N 0.637
Tal_R011355 Tyto alba Tal_R011355 N 0.636
SPU_022574 Strongylocentrotus purpuratus SPU_022574 N 0.635
NECAME_08983 Necator americanus NECAME_08983 N 0.635
ACHR008505 Anopheles christyi ACHR008505 N 0.634
ACUA020431 Anopheles culicifacies ACUA020431 N 0.634
AEPI010384 Anopheles epiroticus AEPI010384 N 0.634
Minc14799 Meloidogyne incognita Minc14799 N 0.633
GRMZM2G381748 Zea mays GRMZM2G381748 N 0.631
AFUN002980 Anopheles funestus AFUN002980 N 0.631
ASTEI00742 Anopheles stephensi ASTEI00742 N 0.631
ASIM_0000060401 Anisakis simplex ASIM_0000060401 N 0.631
ASIM_0001450801 Anisakis simplex ASIM_0001450801 N 0.631
maker-nMf.1.1.scaf28435-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf28435-augustus-gene-0.3 N 0.630
hoxc12a Gasterosteus aculeatus ENSGACG00000009391 N 0.628
M378DRAFT_56764 Amanita muscaria M378DRAFT_56764 N 0.625
HMEL006102 Heliconius melpomene HMEL006102 N 0.623
BGIBMGA010052 Bombyx mori BGIBMGA010052 N 0.621
K443DRAFT_111002 Laccaria amethystina K443DRAFT_111002 N 0.621
LACBIDRAFT_243459 Laccaria bicolor LACBIDRAFT_243459 N 0.621
LOAG_18696 Loa loa LOAG_18696 N 0.621
DICVIV_02944 Dictyocaulus viviparus DICVIV_02944 N 0.621
nOo.2.0.1.g12002 Onchocerca ochengi nOo.2.0.1.g12002 N 0.621
TRAES3BF096700070CFD_g Triticum aestivum TRAES3BF096700070CFD_g N 0.620
AMIN006246 Anopheles minimus AMIN006246 N 0.620
PPAI007203 Phlebotomus papatasi PPAI007203 N 0.620
BGLB006778 Biomphalaria glabrata BGLB006778 N 0.619
ECPE_0000357901 Echinostoma caproni ECPE_0000357901 N 0.618
Hba_10254 Heterorhabditis bacteriophora Hba_10254 N 0.618
maker-nMf.1.1.scaf05303-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf05303-snap-gene-0.8 N 0.618
EEL_0000533501 Elaeophora elaphi EEL_0000533501 N 0.616
ENSCSAG00000006765 Chlorocebus sabaeus ENSCSAG00000006765 N 0.614
ENSECAG00000002506 Equus caballus ENSECAG00000002506 I 0.614
HMX2 Felis catus ENSFCAG00000023440 N 0.614
ENSFCAG00000025984 Felis catus ENSFCAG00000025984 N 0.614
Alligator_sinensis_CCG004967.1 Alligator sinensis Alligator_sinensis_CCG004967.1 N 0.614
CLEC004114 Cimex lectularius CLEC004114 N 0.614
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N 0.614
BTMF_0000546301 Brugia timori BTMF_0000546301 N 0.614
SPER_0001728701 Spirometra erinaceieuropaei SPER_0001728701 N 0.614
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N 0.613
ANCDUO_08183 Ancylostoma duodenale ANCDUO_08183 N 0.612
HNAJ_0000607701 Hymenolepis nana HNAJ_0000607701 N 0.612
Cmyd_10012338 Chelonia mydas Cmyd_10012338 N 0.611
A_05161 Schistosoma haematobium A_05161 N 0.611
DME_0000044501 Dracunculus medinensis DME_0000044501 N 0.611
T265_14387 Opisthorchis viverrini T265_14387 N 0.611
CpipJ_CPIJ001378 Culex pipiens CpipJ_CPIJ001378 N 0.610
Bm8478 Brugia malayi Bm8478 N 0.610
CJA40511 Caenorhabditis japonica CJA40511 I 0.610
CPIJ001378 Culex quinquefasciatus CPIJ001378 N 0.610
ENSACAG00000000961 Anolis carolinensis ENSACAG00000000961 N 0.610
ENSACAG00000005787 Anolis carolinensis ENSACAG00000005787 N 0.610
ENSACAG00000027662 Anolis carolinensis ENSACAG00000027662 I 0.610
NKX6-3 Canis familiaris ENSCAFG00000005710 N 0.610
ENSCJAG00000004205 Callithrix jacchus ENSCJAG00000004205 I 0.610
NKX6-3 Homo sapiens ENSG00000165066 D 0.610
ENSMEUG00000015794 Macropus eugenii ENSMEUG00000015794 I 0.610
ENSMMUG00000014725 Macaca mulatta ENSMMUG00000014725 N 0.610
ENSOANG00000003475 Ornithorhynchus anatinus ENSOANG00000003475 I 0.610
ENSPANG00000014739 Papio anubis ENSPANG00000014739 N 0.610
ENSPCAG00000005898 Procavia capensis ENSPCAG00000005898 N 0.610
ENSPPYG00000018545 Pongo abelii ENSPPYG00000018545 N 0.610
HOXB2 Pan troglodytes ENSPTRG00000009352 I 0.610
NKX6-3 Tursiops truncatus ENSTTRG00000003567 N 0.610
LOAG_07462 Loa loa LOAG_07462 N 0.610
PPA04715 Pristionchus pacificus PPA04715 N 0.610
Tal_R008067 Tyto alba Tal_R008067 I 0.610
CLEC002615 Cimex lectularius CLEC002615 N 0.610
LCUP008695 Lucilia cuprina LCUP008695 N 0.610
hoxb2.S Xenopus laevis XB-GENE-478530 I 0.610
AALB008451 Anopheles albimanus AALB008451 N 0.610
AARA004444 Anopheles arabiensis AARA004444 N 0.610
AATE009299 Anopheles atroparvus AATE009299 I 0.610
ADIR006385 Anopheles dirus ADIR006385 N 0.610
AMEM007254 Anopheles merus AMEM007254 N 0.610
AMEM011598 Anopheles merus AMEM011598 N 0.610
AMIN002696 Anopheles minimus AMIN002696 N 0.610
AQUA009533 Anopheles quadriannulatus AQUA009533 N 0.610
nDi.2.2.2.g10376 Dirofilaria immitis nDi.2.2.2.g10376 N 0.610
SMRZ_0000903001 Schistosoma margrebowiei SMRZ_0000903001 N 0.610
SROB_0001009601 Schistosoma rodhaini SROB_0001009601 N 0.610
ANCCAN_23849 Ancylostoma caninum ANCCAN_23849 N 0.609
ISCW012461 Ixodes scapularis ISCW012461 N 0.608
HHAL005220-PA Halyomorpha halys HHAL005220-PA N 0.608
AEPI002459 Anopheles epiroticus AEPI002459 N 0.608
ASIM_0000175201 Anisakis simplex ASIM_0000175201 N 0.608
SMTD_0001153001 Schistosoma mattheei SMTD_0001153001 N 0.608
SVUK_0001081801 Strongylus vulgaris SVUK_0001081801 N 0.608
TLX2 Ochotona princeps ENSOPRG00000014031 N 0.607
GRMZM2G134260 Zea mays GRMZM2G134260 I 0.607
HHAL004742-PA Halyomorpha halys HHAL004742-PA N 0.607
LDEC016573 Leptinotarsa decemlineata LDEC016573 N 0.607
WUBG_03180 Wuchereria bancrofti WUBG_03180 N 0.606
ENSGALG00000020423 Gallus gallus ENSGALG00000020423 N 0.606
GH13586 Drosophila grimshawi FBgn0121062 N 0.606
KGM_15359 Danaus plexippus KGM_15359 N 0.606
NEMVEDRAFT_v1g101680 Nematostella vectensis NEMVEDRAFT_v1g101680 N 0.606
ANCCAN_18983 Ancylostoma caninum ANCCAN_18983 N 0.606
ANCCEY_10591 Ancylostoma ceylanicum ANCCEY_10591 N 0.606
ANCDUO_04800 Ancylostoma duodenale ANCDUO_04800 N 0.606
ASIM_0000357501 Anisakis simplex ASIM_0000357501 N 0.606
DICVIV_09128 Dictyocaulus viviparus DICVIV_09128 N 0.606
HPBE_0002651601 Heligmosomoides bakeri HPBE_0002651601 N 0.606
NBR_0000086301 Nippostrongylus brasiliensis NBR_0000086301 N 0.606
NECAME_11765 Necator americanus NECAME_11765 N 0.606
LDEC004784 Leptinotarsa decemlineata LDEC004784 N 0.605
ENSSHAG00000011988 Sarcophilus harrisii ENSSHAG00000011988 I 0.604
A_05714 Schistosoma haematobium A_05714 N 0.604
ANCCAN_14745 Ancylostoma caninum ANCCAN_14745 N 0.604
DICVIV_01479 Dictyocaulus viviparus DICVIV_01479 N 0.604
ENSTGUG00000000339 Taeniopygia guttata ENSTGUG00000000339 N 0.603
Alligator_sinensis_CCG010660.1 Alligator sinensis Alligator_sinensis_CCG010660.1 N 0.603
BGLB011885 Biomphalaria glabrata BGLB011885 N 0.603
DILT_0000613101 Diphyllobothrium latum DILT_0000613101 N 0.603
SPAL_0000530600 Strongyloides papillosus SPAL_0000530600 N 0.603
SPER_0001567701 Spirometra erinaceieuropaei SPER_0001567701 N 0.603
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N 0.603
WUBG_09511 Wuchereria bancrofti WUBG_09511 N 0.602
BGIBMGA003265 Bombyx mori BGIBMGA003265 N 0.602
CGI_10026625 Crassostrea gigas CGI_10026625 N 0.602
ENSMGAG00000010685 Meleagris gallopavo ENSMGAG00000010685 I 0.602
ENSMLUG00000022220 Myotis lucifugus ENSMLUG00000022220 N 0.602
GBX2 Oryzias latipes ENSORLG00000001376 I 0.602
HMEL016138 Heliconius melpomene HMEL016138 N 0.602
Tal_R004953 Tyto alba Tal_R004953 N 0.602
Ocbimv22010205m.g Octopus bimaculoides Ocbimv22010205m.g N 0.602
HHAL009617-PA Halyomorpha halys HHAL009617-PA N 0.602
SNAPOd2T00002147001 Oikopleura dioica SNAPOd2T00002147001 N 0.602
BGLB007768 Biomphalaria glabrata BGLB007768 N 0.602
PEQ_0000993201 Parascaris equorum PEQ_0000993201 N 0.602
F775_01938 Aegilops tauschii F775_01938 N 0.601
ENSAMXG00000008007 Astyanax mexicanus ENSAMXG00000008007 I 0.600
BARX1 Homo sapiens ENSG00000131668 D 0.600
BARX2 Ornithorhynchus anatinus ENSOANG00000000573 N 0.600
Smp_136900 Schistosoma mansoni Smp_136900 N 0.600
Alligator_sinensis_CCG001661.1 Alligator sinensis Alligator_sinensis_CCG001661.1 I 0.600
Cmyd_10005403 Chelonia mydas Cmyd_10005403 I 0.600
AMAM021430 Anopheles maculatus AMAM021430 N 0.600
BGLB007714 Biomphalaria glabrata BGLB007714 N 0.600
LLOJ004702 Lutzomyia longipalpis LLOJ004702 N 0.600
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.599
MLOC_34121 Hordeum vulgare MLOC_34121 N 0.599