CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG26065
(
Caenorhabditis briggsae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
CBG26065
T205604_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.613
0.319
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG26065
Homeodomain
92
138
KRTRRSHCEVATQILQAYFETSQHPSGLQMAQFAEATGLNNKQVKAW
Links
Other
Homeodomain
family TFs
Other
Caenorhabditis briggsae
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000006428
Gadus morhua
ENSGMOG00000006428
I
0.644
PBX3
Tupaia belangeri
ENSTBEG00000016855
I
0.644
PBX4
Oryctolagus cuniculus
ENSOCUG00000029208
I
0.631
Ogr15448
Ophisaurus gracilis
Ogr15448
I
0.629
CABZ01017151.1
Danio rerio
ENSDARG00000104156
I
0.613
PBX1
Homo sapiens
ENSG00000185630
D
0.613
ENSLACG00000016442
Latimeria chalumnae
ENSLACG00000016442
I
0.613
ENSLOCG00000006841
Lepisosteus oculatus
ENSLOCG00000006841
I
0.613
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
0.613
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
0.613
Pbx1
Mus musculus
ENSMUSG00000052534
D
0.613
PBX1
Oryzias latipes
ENSORLG00000016702
I
0.613
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
0.613
A_00975
Schistosoma haematobium
A_00975
I
0.613
D915_05491
Fasciola hepatica
D915_05491
I
0.613
ENSACAG00000003721
Anolis carolinensis
ENSACAG00000003721
I
0.611
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
0.611
SVUK_0000462001
Strongylus vulgaris
SVUK_0000462001
I
0.611
TELCIR_02026
Teladorsagia circumcincta
TELCIR_02026
I
0.603
LDEC006593
Leptinotarsa decemlineata
LDEC006593
I
0.601