CBG26065 (Caenorhabditis briggsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBG26065 T205604_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV

BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.613 0.319
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG26065 Homeodomain 92 138

Links

Other Homeodomain family TFs
Other Caenorhabditis briggsae TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29794.m003447 Ricinus communis 29794.m003447 I
Aquca_013_00366 Aquilegia coerulea Aquca_013_00366 I
PC-MYB1 Arabidopsis thaliana AT4G32730 D
Bo1g010040 Brassica oleracea Bo1g010040 I
Bo7g115810 Brassica oleracea Bo7g115810 I
Bostr.7867s1124 Boechera stricta Bostr.7867s1124 I
Bra011376 Brassica rapa Bra011376 I
Ca_01884 Cicer arietinum Ca_01884 I
Ca_14925 Cicer arietinum Ca_14925 I
Ciclev10007316m.g Citrus clementina Ciclev10007316m.g I
Cla022565 Citrullus lanatus Cla022565 I
Cla023357 Citrullus lanatus Cla023357 I
Cucsa.161430 Cucumis sativus Cucsa.161430 I
Cucsa.311420 Cucumis sativus Cucsa.311420 I
Eucgr.C02893 Eucalyptus grandis Eucgr.C02893 I
evm.TU.supercontig_78.76 Carica papaya evm.TU.supercontig_78.76 I
PC-MYB1 Arabidopsis lyrata fgenesh2_kg.7__866__AT4G32730.2 I
gene08793-v1.0-hybrid Fragaria vesca gene08793-v1.0-hybrid I
GLYMA04G08550 Glycine max GLYMA04G08550 I
GLYMA06G08660 Glycine max GLYMA06G08660 I
GLYMA14G21523 Glycine max GLYMA14G21523 I
GLYMA17G26240 Glycine max GLYMA17G26240 I
Gorai.009G051000 Gossypium raimondii Gorai.009G051000 I
Gorai.010G110000 Gossypium raimondii Gorai.010G110000 I
LjT22I05.60.nd Lotus japonicus LjT22I05.60.nd I
Lus10022136.g Linum usitatissimum Lus10022136.g I
MDP0000179225 Malus domestica MDP0000179225 I
MDP0000295807 Malus domestica MDP0000295807 I
mgf006384m Mimulus guttatus mgf006384m I
mgf008601m Mimulus guttatus mgf008601m I
MTR_1g026870 Medicago truncatula MTR_1g026870 I
MTR_3g110028 Medicago truncatula MTR_3g110028 I
PK12011.1 Cannabis sativa PK12011.1 D
Pm005124 Prunus mume Pm005124 I
POPTR_0006s25840 Populus trichocarpa POPTR_0006s25840 I
POPTR_0018s00710 Populus trichocarpa POPTR_0018s00710 I
PRUPE_ppa000676mg Prunus persica PRUPE_ppa000676mg I
Q948S5_TOBAC Nicotiana tabacum Q948S5_TOBAC D
SapurV1A.0283s0180 Salix purpurea SapurV1A.0283s0180 I
SapurV1A.0446s0220 Salix purpurea SapurV1A.0446s0220 I
Solyc08g068320.2 Solanum lycopersicum Solyc08g068320.2 I
TCM_047091 Theobroma cacao TCM_047091 I
VIT_04s0008g03780 Vitis vinifera VIT_04s0008g03780 I
VIT_11s0016g03750 Vitis vinifera VIT_11s0016g03750 I