CBN12980 (Caenorhabditis brenneri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBN12980 T205676_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG08197
M02064_2.00 		Caenorhabditis briggsae
NNDACDNN
NNHGTHNN		 PBM
Weirauch et al.(2014)
pTH6408 		0.853 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN12980 Homeodomain 111 169

Links

Other Homeodomain family TFs
Other Caenorhabditis brenneri TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CBN07279 Caenorhabditis brenneri CBN07279 I 0.867
CBG08197 Caenorhabditis briggsae CBG08197 D 0.853
CJA00344 Caenorhabditis japonica CJA00344 I 0.853
CRE09644 Caenorhabditis remanei CRE09644 I 0.853
irx-1 Caenorhabditis elegans WBGene00007984 I 0.820
e_gw.97.193.1 Branchiostoma floridae e_gw.97.193.1 I 0.692
SNAPOd2T00027338001 Oikopleura dioica SNAPOd2T00027338001 I 0.690
csin108827 Clonorchis sinensis csin108827 I 0.683
Smp_149230 Schistosoma mansoni Smp_149230 I 0.678
Sjc_0031820 Schistosoma japonicum Sjc_0031820 I 0.678
Sjc_0031830 Schistosoma japonicum Sjc_0031830 I 0.678
HDID_0000302701 Hymenolepis diminuta HDID_0000302701 I 0.645
HmN_000469000 Hymenolepis microstoma HmN_000469000 I 0.645
csin107852 Clonorchis sinensis csin107852 I 0.642
ECANG7_08640 Echinococcus canadensis ECANG7_08640 I 0.642
HmN_000708300 Hymenolepis microstoma HmN_000708300 I 0.642
HNAJ_0000146901 Hymenolepis nana HNAJ_0000146901 I 0.642
T265_13435 Opisthorchis viverrini T265_13435 I 0.642
TASK_0000023001 Taenia asiatica TASK_0000023001 I 0.642
TsM_000262600 Taenia solium TsM_000262600 I 0.642
TTAC_0000065401 Hydatigera taeniaeformis TTAC_0000065401 I 0.642
Cmyd_10004597 Chelonia mydas Cmyd_10004597 I 0.636