CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSECAG00000002506
(
Equus caballus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSECAG00000002506
T209074_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nkx3-2
M00506_2.00
Mus musculus
NNRAGDRNN
NNYHCTYNN
PBM
Berger et al.(2008)
Bapx1_2343
0.325
1.000
NKX3-2
M05012_2.00
Homo sapiens
NNTAAGTGSN
NSCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_HT-SELEX
0.325
1.000
NKX3-2
M09138_2.00
Homo sapiens
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_HUMAN.H11MO.0.C
0.325
1.000
Nkx3-2
M09212_2.00
Mus musculus
TTAAGTGBNH
DNVCACTTAA
Misc
Kulakovskiy et al.(2013)
NKX32_MOUSE.H11MO.0.B
0.325
1.000
NKX3-2
M10663_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX32_01
0.325
1.000
NKX3-2
M05013_2.00
Homo sapiens
NNTAAGTGBN
NVCACTTANN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_1
0.325
1.000
NKX3-2
M05014_2.00
Homo sapiens
NTAACGHB
VDCGTTAN
SELEX
Yin et al.(2017)
NKX3-2_eDBD_Methyl-HT-SELEX_2
0.325
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSECAP00000001672
Homeodomain
1
34
FNHQRYLSGPERADLAASLKLTETQVKIWFQNRR
Links
Other
Homeodomain
family TFs
Other
Equus caballus
TFs
226 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ISCW012461
Ixodes scapularis
ISCW012461
N
0.806
SCUD_0000383301
Schistosoma curassoni
SCUD_0000383301
N
0.795
Gfo_R000008
Geospiza fortis
Gfo_R000008
N
0.782
ANCDUO_19178
Ancylostoma duodenale
ANCDUO_19178
N
0.755
Ocbimv22024374m.g
Octopus bimaculoides
Ocbimv22024374m.g
N
0.749
Brh_R000011
Buceros rhinoceros
Brh_R000011
I
0.747
Ca_23643
Cicer arietinum
Ca_23643
N
0.742
M407DRAFT_77617
Tulasnella calospora
M407DRAFT_77617
N
0.727
ORUFI09G21220
Oryza rufipogon
ORUFI09G21220
N
0.723
ENSFCAG00000025984
Felis catus
ENSFCAG00000025984
N
0.674
Tal_R008067
Tyto alba
Tal_R008067
I
0.674
HNAJ_0000607701
Hymenolepis nana
HNAJ_0000607701
N
0.674
GH13586
Drosophila grimshawi
FBgn0121062
N
0.671
Cmyd_10012338
Chelonia mydas
Cmyd_10012338
N
0.669
DME_0000044501
Dracunculus medinensis
DME_0000044501
N
0.668
ANCCAN_11756
Ancylostoma caninum
ANCCAN_11756
N
0.667
HHAL004742-PA
Halyomorpha halys
HHAL004742-PA
N
0.666
SBAD_0000495201
Soboliphyme baturini
SBAD_0000495201
N
0.666
SPER_0001728701
Spirometra erinaceieuropaei
SPER_0001728701
N
0.666
T265_14387
Opisthorchis viverrini
T265_14387
N
0.666
ENSCSAG00000006765
Chlorocebus sabaeus
ENSCSAG00000006765
N
0.662
Alligator_sinensis_CCG004967.1
Alligator sinensis
Alligator_sinensis_CCG004967.1
N
0.662
BGIBMGA003265
Bombyx mori
BGIBMGA003265
N
0.661
CGI_10026625
Crassostrea gigas
CGI_10026625
N
0.661
HMX2
Felis catus
ENSFCAG00000023440
N
0.661
HMEL016138
Heliconius melpomene
HMEL016138
N
0.661
BTMF_0000546301
Brugia timori
BTMF_0000546301
N
0.661
ENSTGUG00000000339
Taeniopygia guttata
ENSTGUG00000000339
N
0.660
Tal_R004953
Tyto alba
Tal_R004953
N
0.660
SPAL_0000530600
Strongyloides papillosus
SPAL_0000530600
N
0.660
WUBG_03180
Wuchereria bancrofti
WUBG_03180
N
0.659
CLEC004114
Cimex lectularius
CLEC004114
N
0.658
AATE009299
Anopheles atroparvus
AATE009299
I
0.658
AMEM007254
Anopheles merus
AMEM007254
N
0.658
snap_masked-nMf.1.1.scaf13062-processed-gene-0.2
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf13062-processed-gene-0.2
N
0.658
LDEC024564
Leptinotarsa decemlineata
LDEC024564
N
0.656
ANCDUO_16102
Ancylostoma duodenale
ANCDUO_16102
N
0.656
ENSMGAG00000010685
Meleagris gallopavo
ENSMGAG00000010685
I
0.655
Ocbimv22010205m.g
Octopus bimaculoides
Ocbimv22010205m.g
N
0.655
AMIN006246
Anopheles minimus
AMIN006246
N
0.655
PPAI007203
Phlebotomus papatasi
PPAI007203
N
0.655
DICVIV_09128
Dictyocaulus viviparus
DICVIV_09128
N
0.655
NEMVEDRAFT_v1g101680
Nematostella vectensis
NEMVEDRAFT_v1g101680
N
0.654
HPBE_0002651601
Heligmosomoides bakeri
HPBE_0002651601
N
0.653
SVUK_0001081801
Strongylus vulgaris
SVUK_0001081801
N
0.653
GBX2
Oryzias latipes
ENSORLG00000001376
I
0.652
LLOJ004702
Lutzomyia longipalpis
LLOJ004702
N
0.652
Alligator_sinensis_CCG010660.1
Alligator sinensis
Alligator_sinensis_CCG010660.1
N
0.651
HHAL009617-PA
Halyomorpha halys
HHAL009617-PA
N
0.650
SNAPOd2T00002147001
Oikopleura dioica
SNAPOd2T00002147001
N
0.650
BGLB007768
Biomphalaria glabrata
BGLB007768
N
0.650
maker-nMf.1.1.scaf05303-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf05303-snap-gene-0.8
N
0.650
AAA49750
Xenopus laevis
AAA49750
N
0.647
ACEP24283
Atta cephalotes
ACEP24283
N
0.646
ENSOCUG00000013528
Oryctolagus cuniculus
ENSOCUG00000013528
I
0.646
ENSXMAG00000013191
Xiphophorus maculatus
ENSXMAG00000013191
N
0.646
ENSMLUG00000022220
Myotis lucifugus
ENSMLUG00000022220
N
0.643
Ocbimv22024994m.g
Octopus bimaculoides
Ocbimv22024994m.g
N
0.643
ANCCAN_18983
Ancylostoma caninum
ANCCAN_18983
N
0.642
ANCCAN_27026
Ancylostoma caninum
ANCCAN_27026
N
0.642
ANCCEY_10591
Ancylostoma ceylanicum
ANCCEY_10591
N
0.642
ANCCEY_10891
Ancylostoma ceylanicum
ANCCEY_10891
N
0.642
ANCDUO_04800
Ancylostoma duodenale
ANCDUO_04800
N
0.642
TRE_0000162501
Trichobilharzia regenti
TRE_0000162501
N
0.641
HOXB2
Pan troglodytes
ENSPTRG00000009352
I
0.640
KGM_15359
Danaus plexippus
KGM_15359
N
0.640
hoxb2.S
Xenopus laevis
XB-GENE-478530
I
0.640
NBR_0000086301
Nippostrongylus brasiliensis
NBR_0000086301
N
0.640
WUBG_09511
Wuchereria bancrofti
WUBG_09511
N
0.637
Ogr09559
Ophisaurus gracilis
Ogr09559
N
0.637
PEQ_0000993201
Parascaris equorum
PEQ_0000993201
N
0.637
LDEC016573
Leptinotarsa decemlineata
LDEC016573
N
0.636
A_05714
Schistosoma haematobium
A_05714
N
0.636
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10580-processed-gene-0.0
N
0.636
BGIBMGA006390
Bombyx mori
BGIBMGA006390
I
0.635
CapteG142082
Capitella teleta
CapteG142082
N
0.635
HOXB3
Canis familiaris
ENSCAFG00000028513
I
0.635
KGM_21794
Danaus plexippus
KGM_21794
I
0.635
PHUM265030
Pediculus humanus
PHUM265030
I
0.635
hoxc12a
Gasterosteus aculeatus
ENSGACG00000009391
N
0.634
ENSSHAG00000011988
Sarcophilus harrisii
ENSSHAG00000011988
I
0.634
NEMVEDRAFT_v1g150519
Nematostella vectensis
NEMVEDRAFT_v1g150519
N
0.634
Minc02159
Meloidogyne incognita
Minc02159
N
0.634
BGLB007719
Biomphalaria glabrata
BGLB007719
N
0.634
BGLB012524
Biomphalaria glabrata
BGLB012524
N
0.634
ACAC_0000093601
Angiostrongylus cantonensis
ACAC_0000093601
N
0.634
ACOC_0000334101
Angiostrongylus costaricensis
ACOC_0000334101
N
0.634
OFLC_0001211001
Onchocerca flexuosa
OFLC_0001211001
N
0.634
SMTD_0001030501
Schistosoma mattheei
SMTD_0001030501
N
0.634
LOC100912608
Rattus norvegicus
ENSRNOG00000050252
I
0.633
BGLB011885
Biomphalaria glabrata
BGLB011885
N
0.630
NECAME_11765
Necator americanus
NECAME_11765
N
0.630
Ogr19002
Ophisaurus gracilis
Ogr19002
N
0.629
DILT_0000613101
Diphyllobothrium latum
DILT_0000613101
N
0.629
SMTD_0001153001
Schistosoma mattheei
SMTD_0001153001
N
0.629
SPER_0001567701
Spirometra erinaceieuropaei
SPER_0001567701
N
0.629
ENSTSYG00000005123
Tarsius syrichta
ENSTSYG00000005123
N
0.627
Cflo_12078--XP_001122113.1_APIME
Camponotus floridanus
Cflo_12078--XP_001122113.1_APIME
I
0.627
Hsal_06516--XP_001122113.1_APIME
Harpegnathos saltator
Hsal_06516--XP_001122113.1_APIME
I
0.627
GPLIN_000838600
Globodera pallida
GPLIN_000838600
N
0.627
KGM_13123
Danaus plexippus
KGM_13123
N
0.624
LDEC004784
Leptinotarsa decemlineata
LDEC004784
N
0.624
A_05161
Schistosoma haematobium
A_05161
N
0.624
Smp_136900
Schistosoma mansoni
Smp_136900
N
0.623
NECAME_15451
Necator americanus
NECAME_15451
N
0.623
Minc14799
Meloidogyne incognita
Minc14799
N
0.621
BGLB007714
Biomphalaria glabrata
BGLB007714
N
0.621
ENSAMXG00000008007
Astyanax mexicanus
ENSAMXG00000008007
I
0.620
BARX1
Homo sapiens
ENSG00000131668
D
0.620
GI23625
Drosophila mojavensis
FBgn0146351
N
0.620
Alligator_sinensis_CCG001661.1
Alligator sinensis
Alligator_sinensis_CCG001661.1
I
0.620
Cmyd_10005403
Chelonia mydas
Cmyd_10005403
I
0.620
WUBG_18725
Wuchereria bancrofti
WUBG_18725
N
0.619
ENSPMAG00000008178
Petromyzon marinus
ENSPMAG00000008178
N
0.619
EVEC_0001374701
Enterobius vermicularis
EVEC_0001374701
N
0.619
ENSPTRG00000017522
Pan troglodytes
ENSPTRG00000017522
N
0.618
TLX3
Taeniopygia guttata
ENSTGUG00000014966
N
0.618
ENSTGUG00000011379
Taeniopygia guttata
ENSTGUG00000011379
I
0.617
GLYMA08G09430
Glycine max
GLYMA08G09430
N
0.617
YQE_10731
Dendroctonus ponderosae
YQE_10731
N
0.617
Aan_R001812
Calypte anna
Aan_R001812
N
0.617
Aan_R007134
Calypte anna
Aan_R007134
I
0.617
Afo_R002867
Aptenodytes forsteri
Afo_R002867
I
0.617
AEPI010666
Anopheles epiroticus
AEPI010666
N
0.617
AQUA015309
Anopheles quadriannulatus
AQUA015309
N
0.617
NECAME_04746
Necator americanus
NECAME_04746
N
0.617
Bo1g131210
Brassica oleracea
Bo1g131210
N
0.616
HHEX
Homo sapiens
ENSG00000152804
I
0.616
Hhex
Mus musculus
ENSMUSG00000024986
I
0.616
GRMZM2G004334
Zea mays
GRMZM2G004334
N
0.616
GRMZM2G123140
Zea mays
GRMZM2G123140
I
0.616
OLONG_008306
Oryza longistaminata
OLONG_008306
N
0.616
OLONG_012459
Oryza longistaminata
OLONG_012459
N
0.616
POPTR_0012s03550
Populus trichocarpa
POPTR_0012s03550
N
0.616
Traes_1DL_9FB53E48A
Triticum aestivum
Traes_1DL_9FB53E48A
N
0.616
Traes_6DL_D722B6E13
Triticum aestivum
Traes_6DL_D722B6E13
N
0.616
cassava13400.valid.m1
Manihot esculenta
cassava13400.valid.m1
N
0.616
mgf006959m
Mimulus guttatus
mgf006959m
N
0.616
MDP0000690933
Malus domestica
MDP0000690933
N
0.616
LjT36I04.40.nd
Lotus japonicus
LjT36I04.40.nd
N
0.616
PDK_20s1410161g001
Phoenix dactylifera
PDK_20s1410161g001
N
0.616
BARX2
Ornithorhynchus anatinus
ENSOANG00000000573
N
0.615
EmuJ_000273500
Echinococcus multilocularis
EmuJ_000273500
N
0.615
BRADI3G23370
Brachypodium distachyon
BRADI3G23370
N
0.614
ANCCAN_14745
Ancylostoma caninum
ANCCAN_14745
N
0.614
csin109617
Clonorchis sinensis
csin109617
N
0.614
DICVIV_01479
Dictyocaulus viviparus
DICVIV_01479
N
0.614
ENSMGAG00000009298
Meleagris gallopavo
ENSMGAG00000009298
N
0.613
Hsal_04718--NA
Harpegnathos saltator
Hsal_04718--NA
N
0.613
tetur02g09110
Tetranychus urticae
tetur02g09110
N
0.612
ENSGALG00000020423
Gallus gallus
ENSGALG00000020423
N
0.611
AARA011782
Anopheles arabiensis
AARA011782
I
0.611
ACOM035026
Anopheles coluzzii
ACOM035026
N
0.611
AQUA010391
Anopheles quadriannulatus
AQUA010391
I
0.611
ANCCAN_19464
Ancylostoma caninum
ANCCAN_19464
N
0.611
GM17434
Drosophila sechellia
FBgn0172344
I
0.610
OMERI08G08060
Oryza meridionalis
OMERI08G08060
N
0.610
AMAM004568
Anopheles maculatus
AMAM004568
N
0.610
ASIM_0000175201
Anisakis simplex
ASIM_0000175201
N
0.610
ASIM_0000357501
Anisakis simplex
ASIM_0000357501
N
0.610
HPBE_0002029201
Heligmosomoides bakeri
HPBE_0002029201
N
0.610
VAX1
Loxodonta africana
ENSLAFG00000018107
N
0.609
M413DRAFT_413029
Hebeloma cylindrosporum
M413DRAFT_413029
N
0.609
Afo_R012244
Aptenodytes forsteri
Afo_R012244
N
0.609
AMAM021430
Anopheles maculatus
AMAM021430
N
0.609
AQUA007256
Anopheles quadriannulatus
AQUA007256
N
0.609
Traes_6BL_4301B7F15
Triticum aestivum
Traes_6BL_4301B7F15
N
0.608
ENSECAG00000017919
Equus caballus
ENSECAG00000017919
I
0.607
ENSPMAG00000008834
Petromyzon marinus
ENSPMAG00000008834
N
0.607
GM19280
Drosophila sechellia
FBgn0174180
N
0.607
MCINX006168
Melitaea cinxia
MCINX006168
N
0.607
PPA25533
Pristionchus pacificus
PPA25533
N
0.607
ENSP00000417207-D1
Bos grunniens
ENSP00000417207-D1
N
0.607
Myotis_brandtii_Barx2_10007775
Myotis brandtii
Myotis_brandtii_Barx2_10007775
N
0.607
HHAL005220-PA
Halyomorpha halys
HHAL005220-PA
N
0.607
LDEC001874
Leptinotarsa decemlineata
LDEC001874
N
0.607
DME_0000947201
Dracunculus medinensis
DME_0000947201
N
0.607
nDi.2.2.2.g10376
Dirofilaria immitis
nDi.2.2.2.g10376
N
0.607
PXEA_0003344501
Protopolystoma xenopodis
PXEA_0003344501
N
0.607
SBAD_0000398601
Soboliphyme baturini
SBAD_0000398601
N
0.607
SROB_0001224301
Schistosoma rodhaini
SROB_0001224301
N
0.607
GSMUA_Achr3G23090_001
Musa acuminata
GSMUA_Achr3G23090_001
N
0.606
Carubv10007218m.g
Capsella rubella
Carubv10007218m.g
N
0.606
gene23926-v1.0-hybrid
Fragaria vesca
gene23926-v1.0-hybrid
N
0.606
Pavir.Fa02028
Panicum virgatum
Pavir.Fa02028
N
0.606
PDK_20s1347391g002
Phoenix dactylifera
PDK_20s1347391g002
N
0.606
TMUE_s0149002000
Trichuris muris
TMUE_s0149002000
N
0.606
Myotis_brandtii_PRRX2_10024973
Myotis brandtii
Myotis_brandtii_PRRX2_10024973
N
0.605
Sjc_0051970
Schistosoma japonicum
Sjc_0051970
N
0.605
ECPE_0000616401
Echinostoma caproni
ECPE_0000616401
N
0.605
GPUH_0000701601
Gongylonema pulchrum
GPUH_0000701601
N
0.605
scaffold958-EXSNAP2012.2
Pristionchus exspectatus
scaffold958-EXSNAP2012.2
N
0.605
ENSACAG00000007695
Anolis carolinensis
ENSACAG00000007695
N
0.604
DLX3
Loxodonta africana
ENSLAFG00000028511
N
0.604
ENSPPYG00000020202
Pongo abelii
ENSPPYG00000020202
N
0.604
AFAF004701
Anopheles farauti
AFAF004701
N
0.604
CGOC_0001035201
Cylicostephanus goldi
CGOC_0001035201
N
0.604
L596_g18563
Steinernema carpocapsae
L596_g18563
N
0.604
AATE015217
Anopheles atroparvus
AATE015217
N
0.603
ACAC_0001014401
Angiostrongylus cantonensis
ACAC_0001014401
N
0.603
ACOC_0000988901
Angiostrongylus costaricensis
ACOC_0000988901
N
0.603
DICVIV_02748
Dictyocaulus viviparus
DICVIV_02748
N
0.603
DME_0000045101
Dracunculus medinensis
DME_0000045101
N
0.603
OESDEN_25610
Oesophagostomum dentatum
OESDEN_25610
N
0.603
PEQ_0000241601
Parascaris equorum
PEQ_0000241601
N
0.603
TCNE_0000481301
Toxocara canis
TCNE_0000481301
N
0.603
CMQ_3213
Grosmannia clavigera
CMQ_3213
N
0.602
HOXB3
Meleagris gallopavo
ENSMGAG00000002541
N
0.602
ENSPSIG00000004928
Pelodiscus sinensis
ENSPSIG00000004928
N
0.602
TRIATDRAFT_297397
Trichoderma atroviride
TRIATDRAFT_297397
N
0.601
Sakowv30030008m.g
Saccoglossus kowalevskii
Sakowv30030008m.g
N
0.601
CpipJ_CPIJ004950
Culex pipiens
CpipJ_CPIJ004950
N
0.600
WUBG_02755
Wuchereria bancrofti
WUBG_02755
N
0.600
CPIJ004950
Culex quinquefasciatus
CPIJ004950
N
0.600
F775_10961
Aegilops tauschii
F775_10961
N
0.600
PGSC0003DMG400019030
Solanum tuberosum
PGSC0003DMG400019030
N
0.600
TCM_016582
Theobroma cacao
TCM_016582
I
0.600
Tal_R011355
Tyto alba
Tal_R011355
N
0.600
Gorai.003G184900
Gossypium raimondii
Gorai.003G184900
I
0.600
PPAI003186
Phlebotomus papatasi
PPAI003186
N
0.600
Hba_10254
Heterorhabditis bacteriophora
Hba_10254
N
0.600
PGSC0003DMG400013263
Solanum tuberosum
PGSC0003DMG400013263
N
0.599
Afo_R002868
Aptenodytes forsteri
Afo_R002868
I
0.599
Cmyd_10007343
Chelonia mydas
Cmyd_10007343
N
0.599
AARA003138
Anopheles arabiensis
AARA003138
N
0.599
GPLIN_000138000
Globodera pallida
GPLIN_000138000
N
0.599