ENSFALG00000014896 (Ficedula albicollis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSFALG00000014896 T209601_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Hoxc13
M00389_2.00
Mus musculus
NTTWAYDRNN

NNYHRTWAAN
PBM
Berger et al.(2008)
Hoxc13_3127
0.845 0.930
HOXC13
M03129_2.00
Homo sapiens
NTTTTATTRS

SYAATAAAAN
SELEX
Jolma et al.(2013)
HOXC13_1
0.845 0.930
HOXC13
M03130_2.00
Homo sapiens
NCTCGTAAAAH

DTTTTACGAGN
SELEX
Jolma et al.(2013)
HOXC13_2
0.845 0.930
HOXC13
M05072_2.00
Homo sapiens
RKTTTATKGSN

NSCMATAAAMY
SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_1
0.845 0.930
HOXC13
M05073_2.00
Homo sapiens
BCTCGTAAAMH

DKTTTACGAGV
SELEX
Yin et al.(2017)
HOXC13_eDBD_HT-SELEX_2
0.845 0.930
HOXC13
M10680_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC13_Q2
0.845 0.930
HOXC13
M05074_2.00
Homo sapiens
BCTCGTAAAAH

DTTTTACGAGV
SELEX
Yin et al.(2017)
HOXC13_eDBD_Methyl-HT-SELEX
0.845 0.930
Hoxa13
M00473_2.00
Mus musculus
NTTWAYDRN

NYHRTWAAN
PBM
Berger et al.(2008)
Hoxa13_3126
0.840 0.860
HOXA13
M03098_2.00
Homo sapiens
DKTTTATKRS

SYMATAAAMH
SELEX
Jolma et al.(2013)
HOXA13_1
0.840 0.860
HOXA13
M03099_2.00
Homo sapiens
NCTCGTAAAHN

NDTTTACGAGN
SELEX
Jolma et al.(2013)
HOXA13_2
0.840 0.860
HOXA13
M03100_2.00
Homo sapiens
DKTTTATKRS

SYMATAAAMH
SELEX
Jolma et al.(2013)
HOXA13_3
0.840 0.860
HOXA13
M03101_2.00
Homo sapiens
NCTCGTAAAAH

DTTTTACGAGN
SELEX
Jolma et al.(2013)
HOXA13_4
0.840 0.860
HOXA13
M04977_2.00
Homo sapiens
DTTTTATKGGB

VCCMATAAAAH
SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_1
0.840 0.860
HOXA13
M04978_2.00
Homo sapiens
NCTCGTAAAHN

NDTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_eDBD_HT-SELEX_2
0.840 0.860
HOXA13
M04981_2.00
Homo sapiens
DTTTTATKRSN

NSYMATAAAAH
SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_1
0.840 0.860
HOXA13
M04982_2.00
Homo sapiens
NCTCGTAAAWH

DWTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_FL_HT-SELEX_2
0.840 0.860
HOXA13
M09134_2.00
Homo sapiens
VDTWTWATKGS

SCMATWAWAHB
Misc
Kulakovskiy et al.(2013)
HXA13_HUMAN.H11MO.0.C
0.840 0.860
Hoxa13
M09202_2.00
Mus musculus
VDTWTWATKGS

SCMATWAWAHB
Misc
Kulakovskiy et al.(2013)
HXA13_MOUSE.H11MO.0.C
0.840 0.860
HOXA13
M10653_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA13_01
0.840 0.860
HOXA13
M10654_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA13_02
0.840 0.860
HOXA13
M04979_2.00
Homo sapiens
DTTTTATTRSN

NSYAATAAAAH
SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_1
0.840 0.860
HOXA13
M04980_2.00
Homo sapiens
NCTCGTAAAHN

NDTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_eDBD_Methyl-HT-SELEX_2
0.840 0.860
HOXA13
M04983_2.00
Homo sapiens
DKTTTATTGBN

NVCAATAAAMH
SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_1
0.840 0.860
HOXA13
M04984_2.00
Homo sapiens
NCTCGTAAAWH

DWTTTACGAGN
SELEX
Yin et al.(2017)
HOXA13_FL_Methyl-HT-SELEX_2
0.840 0.860
hoxd13a
M02081_2.00
Danio rerio
WTTTATDR

YHATAAAW
PBM
Weirauch et al.(2014)
pTH6143
0.834 0.789
HOXD13
M00299_2.00
Homo sapiens
NTTWAYDDN

NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_REF
0.824 0.807
Hoxd13
M00394_2.00
Mus musculus
NWTHRYDDN

NHHRYDAWN
PBM
Berger et al.(2008)
Hoxd13_2356
0.824 0.807
HOXD13
M03141_2.00
Homo sapiens
DTTTTATKRS

SYMATAAAAH
SELEX
Jolma et al.(2013)
HOXD13_1
0.824 0.807
HOXD13
M03142_2.00
Homo sapiens
BCTCGTAAAAH

DTTTTACGAGV
SELEX
Jolma et al.(2013)
HOXD13_2
0.824 0.807
Hoxd13
M03247_2.00
Mus musculus
DKTTTATTRS

SYAATAAAMH
SELEX
Jolma et al.(2013)
Hoxd13_1
0.824 0.807
Hoxd13
M03248_2.00
Mus musculus
DDTTTAYKAGN

NCTMRTAAAHH
SELEX
Jolma et al.(2013)
Hoxd13_2
0.824 0.807
HOXD13
M05122_2.00
Homo sapiens
GKTTTATKGSS

SSCMATAAAMC
SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_1
0.824 0.807
HOXD13
M05123_2.00
Homo sapiens
BCTCGTAAAMH

DKTTTACGAGV
SELEX
Yin et al.(2017)
HOXD13_eDBD_HT-SELEX_2
0.824 0.807
HOXD13
M10689_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD13_Q6
0.824 0.807
HOXD13
M00295_2.00
Homo sapiens
NTTWAYDDN

NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_N298S
0.824 0.807
HOXD13
M05124_2.00
Homo sapiens
DDTTTATTRBB

VVYAATAAAHH
SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_1
0.824 0.807
HOXD13
M05125_2.00
Homo sapiens
VCTCGTAAAAH

DTTTTACGAGB
SELEX
Yin et al.(2017)
HOXD13_eDBD_Methyl-HT-SELEX_2
0.824 0.807
HOXD13
M00300_2.00
Homo sapiens
WTTTATDR

YHATAAAW
PBM
Barrera et al.(2016)
HOXD13_S316C
0.824 0.789
HOXD13
M00293_2.00
Homo sapiens
NTTWAYDDNN

NNHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_I297V
0.824 0.789
HOXD13
M00298_2.00
Homo sapiens
NTTWAYDDN

NHHRTWAAN
PBM
Barrera et al.(2016)
HOXD13_R306W
0.817 0.789
HOXD13
M00294_2.00
Homo sapiens
THGTWAAW

WTTWACDA
PBM
Barrera et al.(2016)
HOXD13_I322L
0.807 0.789
HOXB13
M02092_2.00
Homo sapiens
NTTWAYDDNN

NNHHRTWAAN
PBM
Weirauch et al.(2014)
pTH5808
0.707 0.825
Hoxb13
M00505_2.00
Mus musculus
NTTWAYDDNN

NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb13_3479
0.707 0.825
HOXB13
M03175_2.00
Homo sapiens
DTTTTATKGG

CCMATAAAAH
SELEX
Jolma et al.(2013)
HOXB13_1
0.707 0.825
HOXB13
M03176_2.00
Homo sapiens
BCTCGTAAAAH

DTTTTACGAGV
SELEX
Jolma et al.(2013)
HOXB13_2
0.707 0.825
HOXB13
M05201_2.00
Homo sapiens
DTTTTATKGGN

NCCMATAAAAH
SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_1
0.707 0.825
HOXB13
M05202_2.00
Homo sapiens
NCTCGTAAAHH

DDTTTACGAGN
SELEX
Yin et al.(2017)
HOXB13_eDBD_HT-SELEX_2
0.707 0.825
HOXB13
M09149_2.00
Homo sapiens
TTTTATDRSN

NSYHATAAAA
Misc
Kulakovskiy et al.(2013)
HXB13_HUMAN.H11MO.0.A
0.707 0.825
HOXB13
M05203_2.00
Homo sapiens
NCTCGTAAAAH

DTTTTACGAGN
SELEX
Yin et al.(2017)
HOXB13_eDBD_Methyl-HT-SELEX
0.707 0.825
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSFALP00000015511 Homeodomain 16 72

Links

Other Homeodomain family TFs
Other Ficedula albicollis TFs

294 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R009572 Calypte anna Aan_R009572 I
ACOC_0001278301 Angiostrongylus costaricensis ACOC_0001278301 I
Afo_R013462 Aptenodytes forsteri Afo_R013462 I
Alligator_sinensis_CCG005392.1 Alligator sinensis Alligator_sinensis_CCG005392.1 I
Alligator_sinensis_CCG006068.1 Alligator sinensis Alligator_sinensis_CCG006068.1 I
ANCCAN_11234 Ancylostoma caninum ANCCAN_11234 I
ASU_11275 Ascaris suum ASU_11275 I
Bm2982 Brugia malayi Bm2982 I
BTMF_0001180601 Brugia timori BTMF_0001180601 I
Cmyd_10001928 Chelonia mydas Cmyd_10001928 I
Cmyd_10006875 Chelonia mydas Cmyd_10006875 I
D917_00700 Trichinella nativa D917_00700 I
D918_02615 Trichuris suis D918_02615 I
DICVIV_05958 Dictyocaulus viviparus DICVIV_05958 I
DME_0000391501 Dracunculus medinensis DME_0000391501 I
EEL_0000192101 Elaeophora elaphi EEL_0000192101 I
EFV58098 Trichinella spiralis EFV58098 I
ENSACAG00000001535 Anolis carolinensis ENSACAG00000001535 I
VDR Anolis carolinensis ENSACAG00000013485 I
ENSAMEG00000007006 Ailuropoda melanoleuca ENSAMEG00000007006 I
ENSAMEG00000013706 Ailuropoda melanoleuca ENSAMEG00000013706 I
ENSAMEG00000015383 Ailuropoda melanoleuca ENSAMEG00000015383 I
ENSAMXG00000008863 Astyanax mexicanus ENSAMXG00000008863 I
ENSAMXG00000012991 Astyanax mexicanus ENSAMXG00000012991 I
ENSAMXG00000019854 Astyanax mexicanus ENSAMXG00000019854 I
VDR Bos taurus ENSBTAG00000016414 I
VDR Canis familiaris ENSCAFG00000009103 I
NR1I2 Canis familiaris ENSCAFG00000011094 I
NR1I3 Canis familiaris ENSCAFG00000012921 I
ENSCHOG00000008514 Choloepus hoffmanni ENSCHOG00000008514 I
vdr-a Ciona intestinalis ENSCING00000020740 I
NR1I3 Callithrix jacchus ENSCJAG00000004783 I
NR1I2 Callithrix jacchus ENSCJAG00000008854 I
VDR Callithrix jacchus ENSCJAG00000015018 I
ENSCPOG00000006025 Cavia porcellus ENSCPOG00000006025 I
NR1I3 Cavia porcellus ENSCPOG00000015331 I
NR1I2 Cavia porcellus ENSCPOG00000020161 I
ENSCSAG00000002676 Chlorocebus sabaeus ENSCSAG00000002676 I
ENSCSAG00000006576 Chlorocebus sabaeus ENSCSAG00000006576 I
ENSCSAG00000007092 Chlorocebus sabaeus ENSCSAG00000007092 I
ENSCSAVG00000001918 Ciona savignyi ENSCSAVG00000001918 I
ENSCSAVG00000008466 Ciona savignyi ENSCSAVG00000008466 I
thraa Danio rerio ENSDARG00000000151 I
nr1i2 Danio rerio ENSDARG00000029766 I
vdrb Danio rerio ENSDARG00000070721 I
VDR Dasypus novemcinctus ENSDNOG00000039161 I
NR1I3 Dasypus novemcinctus ENSDNOG00000045179 I
ENSDORG00000001701 Dipodomys ordii ENSDORG00000001701 I
Nr1i2 Dipodomys ordii ENSDORG00000003966 I
NR1I2 Equus caballus ENSECAG00000008728 I
VDR Equus caballus ENSECAG00000015822 I
VDR Erinaceus europaeus ENSEEUG00000011116 I
THRA Echinops telfairi ENSETEG00000013166 I
NR1I2 Echinops telfairi ENSETEG00000018117 I
NR1I2 Felis catus ENSFCAG00000006092 I
VDR Felis catus ENSFCAG00000024594 I
VDR Homo sapiens ENSG00000111424 D
NR1I3 Homo sapiens ENSG00000143257 D
NR1I2 Homo sapiens ENSG00000144852 D
vdra Gasterosteus aculeatus ENSGACG00000004763 I
vdrb Gasterosteus aculeatus ENSGACG00000007975 I
ENSGALG00000026166 Gallus gallus ENSGALG00000026166 I
ENSGALG00000028624 Gallus gallus ENSGALG00000028624 D
NR1I3 Gorilla gorilla ENSGGOG00000005724 I
NR1I2 Gorilla gorilla ENSGGOG00000007361 I
VDR Gorilla gorilla ENSGGOG00000016473 I
ENSGMOG00000012720 Gadus morhua ENSGMOG00000012720 I
ENSGMOG00000019451 Gadus morhua ENSGMOG00000019451 I
ENSLACG00000010334 Latimeria chalumnae ENSLACG00000010334 I
ENSLACG00000019104 Latimeria chalumnae ENSLACG00000019104 I
NR1I3 Loxodonta africana ENSLAFG00000001180 I
VDR Loxodonta africana ENSLAFG00000006418 I
NR1I2 Loxodonta africana ENSLAFG00000007829 I
ENSLOCG00000005194 Lepisosteus oculatus ENSLOCG00000005194 I
ENSMEUG00000000113 Macropus eugenii ENSMEUG00000000113 I
ENSMEUG00000001987 Macropus eugenii ENSMEUG00000001987 I
ENSMEUG00000014791 Macropus eugenii ENSMEUG00000014791 I
VDR Meleagris gallopavo ENSMGAG00000004846 I
VDR Microcebus murinus ENSMICG00000009017 I
VDR Myotis lucifugus ENSMLUG00000000912 I
NR1I2 Myotis lucifugus ENSMLUG00000002877 I
NR1I2 Macaca mulatta ENSMMUG00000001976 I
VDR Macaca mulatta ENSMMUG00000006727 I
NR1I3 Macaca mulatta ENSMMUG00000018128 I
ENSMMUP00000008847 Macaca fascicularis ENSMMUP00000008847 I
ENSMODG00000028774 Monodelphis domestica ENSMODG00000028774 I
ENSMPUG00000000419 Mustela putorius furo ENSMPUG00000000419 I
Nr1i3 Mus musculus ENSMUSG00000005677 D
Vdr Mus musculus ENSMUSG00000022479 D
Nr1i2 Mus musculus ENSMUSG00000022809 D
ENSNLEG00000005060 Nomascus leucogenys ENSNLEG00000005060 I
ENSNLEG00000014287 Nomascus leucogenys ENSNLEG00000014287 I
ENSNLEG00000017900 Nomascus leucogenys ENSNLEG00000017900 I
ENSOARG00000019372 Ovis aries ENSOARG00000019372 I
ENSOARG00000019817 Ovis aries ENSOARG00000019817 I
NR1I2 Oryctolagus cuniculus ENSOCUG00000006125 I
NR1I3 Oryctolagus cuniculus ENSOCUG00000013537 I
VDR Oryctolagus cuniculus ENSOCUG00000027507 I
VDR Otolemur garnettii ENSOGAG00000005480 I
NR1I2 Otolemur garnettii ENSOGAG00000006017 I
NR1I3 Otolemur garnettii ENSOGAG00000013738 I
ENSONIG00000009200 Oreochromis niloticus ENSONIG00000009200 I
ENSONIG00000019378 Oreochromis niloticus ENSONIG00000019378 I
NR1I2 Ochotona princeps ENSOPRG00000010448 I
vdralpha Oryzias latipes ENSORLG00000001063 I
vdr Oryzias latipes ENSORLG00000016402 I
nr1i2 Oryzias latipes ENSORLG00000017953 I
ENSP00000229022-D1 Bos grunniens ENSP00000229022-D1 I
ENSP00000336528 Macaca fascicularis ENSP00000336528 I
ENSP00000336528-D1 Bos grunniens ENSP00000336528-D1 I
ENSP00000356959 Macaca fascicularis ENSP00000356959 I
ENSPANG00000004760 Papio anubis ENSPANG00000004760 I
ENSPANG00000011327 Papio anubis ENSPANG00000011327 I
ENSPANG00000014194 Papio anubis ENSPANG00000014194 I
NR1I2 Procavia capensis ENSPCAG00000009674 I
NR1I3 Procavia capensis ENSPCAG00000013933 I
ENSPFOG00000001655 Poecilia formosa ENSPFOG00000001655 I
ENSPFOG00000007256 Poecilia formosa ENSPFOG00000007256 I
ENSPFOG00000014233 Poecilia formosa ENSPFOG00000014233 I
ENSPMAG00000000180 Petromyzon marinus ENSPMAG00000000180 D
ENSPMAG00000003695 Petromyzon marinus ENSPMAG00000003695 I
ENSPMAG00000008742 Petromyzon marinus ENSPMAG00000008742 I
ENSPPYG00000004448 Pongo abelii ENSPPYG00000004448 I
ENSPPYG00000013508 Pongo abelii ENSPPYG00000013508 I
ENSPSIG00000004437 Pelodiscus sinensis ENSPSIG00000004437 I
ENSPSIG00000018108 Pelodiscus sinensis ENSPSIG00000018108 I
NR1I3 Pan troglodytes ENSPTRG00000001582 I
NR1I2 Pan troglodytes ENSPTRG00000015263 I
NR1I2 Pteropus vampyrus ENSPVAG00000000884 I
VDR Pteropus vampyrus ENSPVAG00000011085 I
Nr1i2 Rattus norvegicus ENSRNOG00000002906 I
Nr1i3 Rattus norvegicus ENSRNOG00000003260 I
Vdr Rattus norvegicus ENSRNOG00000054420 I
NR1I3 Sorex araneus ENSSARG00000002684 I
ENSSHAG00000004437 Sarcophilus harrisii ENSSHAG00000004437 I
ENSSHAG00000016687 Sarcophilus harrisii ENSSHAG00000016687 I
NR1I2 Sus scrofa ENSSSCG00000011890 I
VDR Sus scrofa ENSSSCG00000020864 I
ENSSTOG00000003818 Ictidomys tridecemlineatus ENSSTOG00000003818 I
ENSSTOG00000014988 Ictidomys tridecemlineatus ENSSTOG00000014988 I
ENSSTOG00000026741 Ictidomys tridecemlineatus ENSSTOG00000026741 I
VDR Tupaia belangeri ENSTBEG00000005717 I
VDR Taeniopygia guttata ENSTGUG00000017093 I
vdra Tetraodon nigroviridis ENSTNIG00000005559 I
vdrb Tetraodon nigroviridis ENSTNIG00000007031 I
nr1i2 Tetraodon nigroviridis ENSTNIG00000013932 I
nr1i2 Takifugu rubripes ENSTRUG00000003245 I
vdrb Takifugu rubripes ENSTRUG00000011576 I
vdra Takifugu rubripes ENSTRUG00000011907 I
ENSTSYG00000003990 Tarsius syrichta ENSTSYG00000003990 I
ENSTSYG00000010757 Tarsius syrichta ENSTSYG00000010757 I
VDR Tursiops truncatus ENSTTRG00000012578 I
ENSXMAG00000003990 Xiphophorus maculatus ENSXMAG00000003990 I
ENSXMAG00000004608 Xiphophorus maculatus ENSXMAG00000004608 I
ENSXMAG00000018707 Xiphophorus maculatus ENSXMAG00000018707 I
Gfo_R005027 Geospiza fortis Gfo_R005027 I
GPUH_0000103801 Gongylonema pulchrum GPUH_0000103801 I
HCOI00433800 Haemonchus contortus HCOI00433800 I
HCOI00910600 Haemonchus contortus HCOI00910600 I
LOAG_16842 Loa loa LOAG_16842 I
Myotis_brandtii_NR1I2_10031787 Myotis brandtii Myotis_brandtii_NR1I2_10031787 I
Myotis_brandtii_VDR_10022134 Myotis brandtii Myotis_brandtii_VDR_10022134 I
nAv.1.0.1.g02667 Acanthocheilonema viteae nAv.1.0.1.g02667 I
NBR_0001980401 Nippostrongylus brasiliensis NBR_0001980401 I
NECAME_11142 Necator americanus NECAME_11142 I
nLs.2.1.2.g05295 Litomosoides sigmodontis nLs.2.1.2.g05295 I
nOo.2.0.1.g07306 Onchocerca ochengi nOo.2.0.1.g07306 I
OFLC_0000511401 Onchocerca flexuosa OFLC_0000511401 I
Ogr03312 Ophisaurus gracilis Ogr03312 I
Pvit_07440 Pogona vitticeps Pvit_07440 I
Pvit_09404 Pogona vitticeps Pvit_09404 I
Pvit_09406 Pogona vitticeps Pvit_09406 I
Q9DFH3_CHICK Gallus gallus Q9DFH3_CHICK I
SMU15000518 Schmidtea mediterranea SMU15000518 I
SNAPOd2T00001873001 Oikopleura dioica SNAPOd2T00001873001 I
TCLT_0000569201 Thelazia callipaeda TCLT_0000569201 I
TCNE_0001577801 Toxocara canis TCNE_0001577801 I
TELCIR_16351 Teladorsagia circumcincta TELCIR_16351 I
tetur01g10970 Tetranychus urticae tetur01g10970 I
TMUE_s0008014200 Trichuris muris TMUE_s0008014200 I
WBGene00245913 Onchocerca volvulus WBGene00245913 I
WUBG_00356 Wuchereria bancrofti WUBG_00356 I
nr1i2.L Xenopus laevis XB-GENE-17336519 I
nr1i3 Xenopus tropicalis XB-GENE-479859 I
vdr Xenopus tropicalis XB-GENE-486505 I
vdr.S Xenopus laevis XB-GENE-864847 I
nr1i2.S Xenopus laevis XB-GENE-865343 I