CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Vax1
(
Mus musculus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMUSG00000006270
T212400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Vax1
M00398_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
(Direct)
(Direct)
Vax1
M10764_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VAX2
M00284_2.00
Homo sapiens
NNTAATND
HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.867
1.000
Vax2
M00464_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.867
1.000
VAX2
M03119_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.867
1.000
VAX2
M05030_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.867
1.000
VAX2
M05031_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.867
1.000
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN
NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.860
0.982
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN
NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.795
0.614
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB
VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.785
0.667
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN
NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.785
0.667
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.785
0.667
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN
NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.785
0.667
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.785
0.667
ems
M06484_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.785
0.667
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR
YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.785
0.667
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM
KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.785
0.667
ems
M06235_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.785
0.667
ems
M09676_2.00
Drosophila melanogaster
WTWATGA
TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.785
0.667
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN
NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.778
0.649
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN
NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.778
0.649
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.778
0.649
EMX1
M05145_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.778
0.649
EMX1
M05147_2.00
Homo sapiens
BTAATTAV
BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.778
0.649
EMX1
M05146_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.778
0.649
EMX1
M05148_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.778
0.649
Emx2
M00495_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.778
0.632
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN
NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.778
0.632
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.778
0.632
EMX2
M05281_2.00
Homo sapiens
YTAATKAB
VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.778
0.632
EMX2
M05282_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.778
0.632
E5
M03814_2.00
Drosophila melanogaster
STAATKNN
NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.778
0.614
E5
M06507_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.778
0.614
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA
TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.778
0.614
E5
M06294_2.00
Drosophila melanogaster
NTAATDR
YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.778
0.614
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN
NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.741
0.579
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN
NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.741
0.579
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN
NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.741
0.579
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.741
0.579
slou
M06494_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.741
0.579
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR
YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.741
0.579
slou
M06263_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.741
0.579
CG18599
M06539_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Mathelier et al.(2014)
MA0177.1
0.733
0.649
CG18599
M06354_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Zhu et al.(2011)
CG18599_Cell_FBgn0038592
0.733
0.649
CG18599
M06355_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
CG18599_SOLEXA_FBgn0038592
0.733
0.649
NEMVEDRAFT_v1g205636
M02150_2.00
Nematostella vectensis
NTAATTAN
NTAATTAN
PBM
Weirauch et al.(2014)
pTH5491
0.731
0.579
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV
BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.726
0.579
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.726
0.579
lms
M06536_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.726
0.579
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR
YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.726
0.579
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN
NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.726
0.579
lms
M06349_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.726
0.579
ind
M06527_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0228.1
0.708
0.579
ind
M06329_2.00
Drosophila melanogaster
YVYTAATKA
TMATTARBR
B1H
Zhu et al.(2011)
Ind_Cell_FBgn0025776
0.708
0.579
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.706
0.544
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.706
0.544
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.706
0.544
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.706
0.544
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.706
0.544
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.706
0.544
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.706
0.544
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.706
0.544
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.706
0.544
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.706
0.544
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.706
0.544
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.706
0.544
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.706
0.544
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.706
0.544
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.706
0.544
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.706
0.544
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.706
0.544
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.706
0.544
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.706
0.544
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.706
0.544
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN
NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.701
0.526
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN
NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.701
0.526
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG
CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.701
0.526
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV
BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.701
0.526
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN
NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.701
0.526
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.699
0.544
Gsx2
M00469_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Gsh2_3990
0.694
0.579
GSX1
M03205_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX1_1
0.694
0.579
GSX2
M03227_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
GSX2_1
0.694
0.579
GSX1
M05271_2.00
Homo sapiens
NYMATNRN
NYNATKRN
SELEX
Yin et al.(2017)
GSX1_eDBD_HT-SELEX
0.694
0.579
GSX2
M05329_2.00
Homo sapiens
HTAATKRS
SYMATTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_HT-SELEX
0.694
0.579
GSX1
M05272_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
GSX1_eDBD_Methyl-HT-SELEX
0.694
0.579
GSX2
M05330_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
GSX2_eDBD_Methyl-HT-SELEX
0.694
0.579
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.694
0.544
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.694
0.544
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.694
0.526
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.694
0.526
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.694
0.526
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.694
0.526
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.694
0.526
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.694
0.526
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.694
0.526
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.694
0.526
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.692
0.544
zen
M06500_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.692
0.544
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA
TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.692
0.544
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.692
0.544
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.692
0.544
En2
M00484_2.00
Mus musculus
NNYHATHN
NDATDRNN
PBM
Berger et al.(2008)
En2_0952
0.691
0.561
En1
M00519_2.00
Mus musculus
HNWTNNN
NNNAWND
PBM
Berger et al.(2008)
En1_3123
0.691
0.561
EN1
M03180_2.00
Homo sapiens
NNTAATTRVB
VBYAATTANN
SELEX
Jolma et al.(2013)
EN1_1
0.691
0.561
EN1
M03181_2.00
Homo sapiens
TAATTRSNYAATTA
TAATTRNSYAATTA
SELEX
Jolma et al.(2013)
EN1_2
0.691
0.561
EN1
M03182_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Jolma et al.(2013)
EN1_3
0.691
0.561
EN1
M03183_2.00
Homo sapiens
TDAKKRSNYMATTA
TAATKRNSYMMTHA
SELEX
Jolma et al.(2013)
EN1_4
0.691
0.561
EN2
M03189_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
EN2_1
0.691
0.561
EN2
M03190_2.00
Homo sapiens
VBTAATTRNN
NNYAATTAVB
SELEX
Jolma et al.(2013)
EN2_2
0.691
0.561
En2
M03276_2.00
Mus musculus
VBTAATTASN
NSTAATTAVB
SELEX
Jolma et al.(2013)
En2_1
0.691
0.561
EN1
M05218_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_HT-SELEX
0.691
0.561
EN2
M05237_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_HT-SELEX
0.691
0.561
EN1
M05871_2.00
Homo sapiens
VNYAATTA
TAATTRNB
SMiLE-seq
Isakova et al.(2017)
EN1
0.691
0.561
EN1
M10714_2.00
Homo sapiens
RTDDTBB
VVAHHAY
Transfac
Matys et al.(2006)
V$EN1_01
0.691
0.561
EN1
M05219_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_1
0.691
0.561
EN1
M05220_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
EN1_eDBD_Methyl-HT-SELEX_2
0.691
0.561
EN2
M05238_2.00
Homo sapiens
VHTDAYGHB
VDCRTHADB
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_1
0.691
0.561
EN2
M05239_2.00
Homo sapiens
BTAATTRV
BYAATTAV
SELEX
Yin et al.(2017)
EN2_eDBD_Methyl-HT-SELEX_2
0.691
0.561
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN
NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.690
0.509
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS
STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.690
0.509
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.690
0.509
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.690
0.509
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA
TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.690
0.509
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN
NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.690
0.509
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.690
0.509
en
M03793_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
en_1
0.684
0.509
en
M06485_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0220.1
0.684
0.509
en
M06236_2.00
Drosophila melanogaster
NYTAATTR
YAATTARN
B1H
Zhu et al.(2011)
En_Cell_FBgn0000577
0.684
0.509
en
M06237_2.00
Drosophila melanogaster
DBTAATKR
YMATTAVH
B1H
Zhu et al.(2011)
en_FlyReg_FBgn0000577
0.684
0.509
en
M06238_2.00
Drosophila melanogaster
NNNTAATTRN
NYAATTANNN
B1H
Zhu et al.(2011)
en_SOLEXA_2_FBgn0000577
0.684
0.509
en
M06239_2.00
Drosophila melanogaster
NTAATTR
YAATTAN
B1H
Zhu et al.(2011)
En_SOLEXA_FBgn0000577
0.684
0.509
en
M09677_2.00
Drosophila melanogaster
HTAATTRN
NYAATTAD
Misc
Kulakovskiy et al.(2009)
en
0.684
0.509
en
M10785_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EN_Q6
0.684
0.509
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.684
0.474
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.684
0.474
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.684
0.474
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.684
0.474
NOTO
M03241_2.00
Homo sapiens
NNTAATKWRN
NYWMATTANN
SELEX
Jolma et al.(2013)
NOTO_1
0.684
0.526
NOTO
M05390_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
NOTO_eDBD_HT-SELEX
0.684
0.526
NOTO
M05391_2.00
Homo sapiens
BTMATKRV
BYMATKAV
SELEX
Yin et al.(2017)
NOTO_eDBD_Methyl-HT-SELEX
0.684
0.526
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN
NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.681
0.667
NEMVEDRAFT_v1g81309
M02152_2.00
Nematostella vectensis
NTAATDNNN
NNNHATTAN
PBM
Weirauch et al.(2014)
pTH5477
0.680
0.596
Otp
M00417_2.00
Mus musculus
NNHAATND
HNATTDNN
PBM
Berger et al.(2008)
Otp_3496
0.675
0.509
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN
NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.675
0.579
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN
NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.675
0.579
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN
NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.675
0.579
eve
M06486_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.675
0.579
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA
TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.675
0.579
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY
RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.675
0.579
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.675
0.579
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD
HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.675
0.579
eve
M10786_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.675
0.579
otp
M03834_2.00
Drosophila melanogaster
BTAATTRN
NYAATTAV
SELEX
Nitta et al.(2015)
otp_1
0.670
0.491
otp
M03835_2.00
Drosophila melanogaster
YTAATTRV
BYAATTAR
SELEX
Nitta et al.(2015)
otp_2
0.670
0.491
otp
M06516_2.00
Drosophila melanogaster
YTAATTA
TAATTAR
B1H
Mathelier et al.(2014)
MA0236.1
0.670
0.491
otp
M06309_2.00
Drosophila melanogaster
HYTAATTA
TAATTARD
B1H
Zhu et al.(2011)
Otp_Cell_FBgn0015524
0.670
0.491
otp
M06310_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Otp_SOLEXA_FBgn0015524
0.670
0.491
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD
HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.670
0.544
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY
RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.670
0.544
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR
YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.670
0.544
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR
YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.670
0.544
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR
YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.670
0.544
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN
NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.669
0.544
PROP1
M00317_2.00
Homo sapiens
HAAYNNNNNN
NNNNNNRTTD
PBM
Barrera et al.(2016)
PROP1_REF
0.669
0.509
PROP1
M03216_2.00
Homo sapiens
TAATTHRATTA
TAATYDAATTA
SELEX
Jolma et al.(2013)
PROP1_1
0.669
0.509
PROP1
M03217_2.00
Homo sapiens
TAATKNRRTTA
TAAYYNMATTA
SELEX
Jolma et al.(2013)
PROP1_2
0.669
0.509
PROP1
M05298_2.00
Homo sapiens
WAATTNNRTTD
HAAYNNAATTW
SELEX
Yin et al.(2017)
PROP1_eDBD_HT-SELEX
0.669
0.509
PROP1
M05301_2.00
Homo sapiens
TAATTNVATTA
TAATBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_HT-SELEX
0.669
0.509
PROP1
M10777_2.00
Sus scrofa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_01
0.669
0.509
PROP1
M10737_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PROP1_Q2
0.669
0.509
PROP1
M00315_2.00
Homo sapiens
NNHNATNN
NNATNDNN
PBM
Barrera et al.(2016)
PROP1_R112Q
0.669
0.509
PROP1
M05299_2.00
Homo sapiens
TAATTNVRTTW
WAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_1
0.669
0.509
PROP1
M05300_2.00
Homo sapiens
TAAYNDCRTTA
TAAYGHNRTTA
SELEX
Yin et al.(2017)
PROP1_eDBD_Methyl-HT-SELEX_2
0.669
0.509
PROP1
M05302_2.00
Homo sapiens
TAATTNVRTTA
TAAYBNAATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_1
0.669
0.509
PROP1
M05303_2.00
Homo sapiens
TAATYRVRTTA
TAAYBYRATTA
SELEX
Yin et al.(2017)
PROP1_FL_Methyl-HT-SELEX_2
0.669
0.509
Prop1
M00498_2.00
Mus musculus
NRAKDDN
NHHMTYN
PBM
Berger et al.(2008)
Prop1_3949
0.669
0.491
Prop1
M09210_2.00
Mus musculus
TAATKRRATTA
TAATYYMATTA
Misc
Kulakovskiy et al.(2013)
PROP1_MOUSE.H11MO.0.C
0.669
0.491
repo
M03826_2.00
Drosophila melanogaster
VTTAATTARB
VYTAATTAAB
SELEX
Nitta et al.(2015)
repo_1
0.667
0.579
repo
M03827_2.00
Drosophila melanogaster
VKYAATTRRN
NYYAATTRMB
SELEX
Nitta et al.(2015)
repo_2
0.667
0.579
repo
M03828_2.00
Drosophila melanogaster
VBYAATTRVNNBYAATTRVB
VBYAATTRVNNBYAATTRVB
SELEX
Nitta et al.(2015)
repo_3
0.667
0.579
repo
M06511_2.00
Drosophila melanogaster
TTAATTA
TAATTAA
B1H
Mathelier et al.(2014)
MA0240.1
0.667
0.579
repo
M06301_2.00
Drosophila melanogaster
DTTAATTA
TAATTAAH
B1H
Zhu et al.(2011)
Repo_Cell_FBgn0011701
0.667
0.579
repo
M06302_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Repo_SOLEXA_FBgn0011701
0.667
0.579
Noto
M02101_2.00
Mus musculus
NNHHATDDNN
NNHHATDDNN
PBM
Weirauch et al.(2014)
pTH6268
0.667
0.509
PROP1
M00316_2.00
Homo sapiens
DTAATTRK
MYAATTAH
PBM
Barrera et al.(2016)
PROP1_R99Q
0.661
0.491
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.660
0.526
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.660
0.526
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.660
0.526
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA
TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.660
0.526
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.660
0.526
Uncx
M00443_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Uncx4
0.658
0.491
uncx
M02111_2.00
Tetraodon nigroviridis
NNTAATTRN
NYAATTANN
PBM
Weirauch et al.(2014)
pTH5474
0.658
0.491
UNCX
M03191_2.00
Homo sapiens
NWAATTVVRTHWN
NWDAYBBAATTWN
SELEX
Jolma et al.(2013)
UNCX_1
0.658
0.491
UNCX
M03192_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
UNCX_2
0.658
0.491
Uncx
M03264_2.00
Mus musculus
NTAATTVRATTAN
NTAATYBAATTAN
SELEX
Jolma et al.(2013)
Uncx_1
0.658
0.491
Uncx
M03265_2.00
Mus musculus
NTAATTRR
YYAATTAN
SELEX
Jolma et al.(2013)
Uncx_2
0.658
0.491
UNCX
M05240_2.00
Homo sapiens
NYAATTRV
BYAATTRN
SELEX
Yin et al.(2017)
UNCX_eDBD_HT-SELEX
0.658
0.491
UNCX
M05241_2.00
Homo sapiens
NYRRYKNN
NNMRYYRN
SELEX
Yin et al.(2017)
UNCX_eDBD_Methyl-HT-SELEX
0.658
0.491
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.657
0.526
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.657
0.526
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN
NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.657
0.526
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.657
0.526
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.657
0.526
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN
NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.657
0.526
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN
NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.657
0.526
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.657
0.491
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.657
0.491
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN
NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.657
0.491
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR
YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.657
0.491
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.657
0.491
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN
NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.657
0.491
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG
CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.657
0.491
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY
RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.657
0.491
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.657
0.491
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.657
0.491
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.657
0.491
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB
VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.657
0.491
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN
NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.657
0.491
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN
NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.656
0.544
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN
NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.656
0.509
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.656
0.509
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.656
0.509
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.656
0.509
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.656
0.509
pb
M03872_2.00
Drosophila melanogaster
NTRAYKRY
RYMRTYAN
SELEX
Nitta et al.(2015)
pb_1
0.656
0.509
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.656
0.509
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.656
0.509
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.656
0.509
pb
M06545_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0238.1
0.656
0.509
pb
M06366_2.00
Drosophila melanogaster
BYTAATKA
TMATTARV
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
0.656
0.509
pb
M06367_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
0.656
0.509
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB
VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.656
0.509
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN
NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.656
0.509
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.656
0.509
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.656
0.509
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.656
0.509
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.656
0.509
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.656
0.509
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN
NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.655
0.526
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.655
0.526
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG
CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.655
0.526
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH
DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.655
0.509
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN
NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.655
0.509
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG
CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.655
0.509
hbn
M03813_2.00
Drosophila melanogaster
HTAATYTAATTAD
HTAATTARATTAD
SELEX
Nitta et al.(2015)
hbn_1
0.654
0.509
hbn
M06506_2.00
Drosophila melanogaster
TTAATTR
YAATTAA
B1H
Mathelier et al.(2014)
MA0226.1
0.654
0.509
hbn
M06291_2.00
Drosophila melanogaster
TWAWTTR
YAAWTWA
B1H
Zhu et al.(2011)
Hbn_Cell_FBgn0008636
0.654
0.509
hbn
M06292_2.00
Drosophila melanogaster
NHTAATTR
YAATTADN
B1H
Zhu et al.(2011)
Hbn_SOLEXA_FBgn0008636
0.654
0.509
ARX
M00264_2.00
Homo sapiens
NNWRATNNN
NNNATYWNN
PBM
Barrera et al.(2016)
ARX_REF
0.650
0.509
Arx
M00467_2.00
Mus musculus
NTAATTDN
NHAATTAN
PBM
Berger et al.(2008)
Arx_1738
0.650
0.509
ARX
M03076_2.00
Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ARX_1
0.650
0.509
Arx
M03269_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Arx_1
0.650
0.509
ARX
M04895_2.00
Homo sapiens
BTAATTRR
YYAATTAV
SELEX
Yin et al.(2017)
ARX_eDBD_HT-SELEX
0.650
0.509
Arx
M10775_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ARX_05
0.650
0.509
ARX
M00261_2.00
Homo sapiens
NNWRAYNNN
NNNRTYWNN
PBM
Barrera et al.(2016)
ARX_P353L
0.650
0.509
ARX
M00262_2.00
Homo sapiens
ATAATTAT
ATAATTAT
PBM
Barrera et al.(2016)
ARX_P353R
0.650
0.509
ARX
M04896_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ARX_eDBD_Methyl-HT-SELEX
0.650
0.509
ARX
M00260_2.00
Homo sapiens
NMTAATTANNN
NNNTAATTAKN
PBM
Barrera et al.(2016)
ARX_L343Q
0.650
0.491
OdsH
M03851_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
OdsH_1
0.650
0.456
OdsH
M03852_2.00
Drosophila melanogaster
TAATBNVATTA
TAATBNVATTA
SELEX
Nitta et al.(2015)
OdsH_2
0.650
0.456
OdsH
M06528_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Mathelier et al.(2014)
MA0198.1
0.650
0.456
OdsH
M06330_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Zhu et al.(2011)
Odsh_Cell_FBgn0026058
0.650
0.456
OdsH
M06331_2.00
Drosophila melanogaster
NHTAATTR
YAATTADN
B1H
Zhu et al.(2011)
Odsh_SOLEXA_FBgn0026058
0.650
0.456
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN
NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.649
0.474
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA
TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.649
0.474
TLX2
M05020_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.649
0.474
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.649
0.474
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.649
0.474
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB
VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.649
0.474
TLX2
M05021_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.649
0.474
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.649
0.474
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.649
0.474
unc-4
M03846_2.00
Drosophila melanogaster
TAATTNAATTA
TAATTNAATTA
SELEX
Nitta et al.(2015)
unc-4_1
0.649
0.456
unc-4
M06523_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0250.1
0.649
0.456
Pph13
M03845_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
Pph13_1
0.649
0.491
Pph13
M06522_2.00
Drosophila melanogaster
NTAATTR
YAATTAN
B1H
Mathelier et al.(2014)
MA0200.1
0.649
0.491
Pph13
M06321_2.00
Drosophila melanogaster
NHTAATTR
YAATTADN
B1H
Zhu et al.(2011)
Pph13_Cell_FBgn0023489
0.649
0.491
Pph13
M06322_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
Pph13_SOLEXA_FBgn0023489
0.649
0.491
SHOX
M02095_2.00
Homo sapiens
NTAATTRN
NYAATTAN
PBM
Weirauch et al.(2014)
pTH5805
0.648
0.509
Shox2
M00439_2.00
Mus musculus
NTAATDDN
NHHATTAN
PBM
Berger et al.(2008)
Shox2_2641
0.648
0.509
SHOX
M03232_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
SHOX_1
0.648
0.509
SHOX2
M03204_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Jolma et al.(2013)
SHOX2_1
0.648
0.509
Shox2
M03263_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Shox2_1
0.648
0.509
SHOX
M05366_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_HT-SELEX
0.648
0.509
Shox2
M10772_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SHOX2_05
0.648
0.509
SHOX
M05367_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_1
0.648
0.509
SHOX
M05368_2.00
Homo sapiens
NTAAYGAN
NTCRTTAN
SELEX
Yin et al.(2017)
SHOX_eDBD_Methyl-HT-SELEX_2
0.648
0.509
CG5369
M03876_2.00
Drosophila melanogaster
TAATTHVATTA
TAATBDAATTA
SELEX
Nitta et al.(2015)
CG5369_1
0.648
0.491
CG5369
M03877_2.00
Drosophila melanogaster
TAATTRNNTAATBN
NVATTANNYAATTA
SELEX
Nitta et al.(2015)
CG5369_2
0.648
0.491
CG5369
M03878_2.00
Drosophila melanogaster
TAATTVRATWA
TWATYBAATTA
SELEX
Nitta et al.(2015)
CG5369_3
0.648
0.491
al
M03776_2.00
Drosophila melanogaster
TAAYBNVRTTA
TAAYBNVRTTA
SELEX
Nitta et al.(2015)
al_1
0.648
0.474
al
M06477_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Mathelier et al.(2014)
MA0208.1
0.648
0.474
al
M06212_2.00
Drosophila melanogaster
TAATTAA
TTAATTA
B1H
Zhu et al.(2011)
Al_Cell_FBgn0000061
0.648
0.474
al
M06213_2.00
Drosophila melanogaster
NNYTAATTR
YAATTARNN
B1H
Zhu et al.(2011)
Al_SOLEXA_FBgn0000061
0.648
0.474
VSX1
M00269_2.00
Homo sapiens
NNWAAYNNN
NNNRTTWNN
PBM
Barrera et al.(2016)
VSX1_REF
0.647
0.456
Vsx1
M00459_2.00
Mus musculus
NNTAATDDN
NHHATTANN
PBM
Berger et al.(2008)
Vsx1_1728
0.647
0.456
Vsx1
M03267_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Vsx1_1
0.647
0.456
VSX1
M00266_2.00
Homo sapiens
NNTAAYNNN
NNNRTTANN
PBM
Barrera et al.(2016)
VSX1_G160D
0.647
0.456
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.647
0.544
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.647
0.544
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.647
0.544
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.647
0.544
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.647
0.526
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.647
0.526
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.647
0.526
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.647
0.526
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.647
0.526
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.647
0.526
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.647
0.526
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.647
0.526
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.647
0.526
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.647
0.526
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.647
0.526
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.647
0.526
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.647
0.526
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.647
0.526
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.647
0.526
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.647
0.526
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.647
0.526
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.647
0.526
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.647
0.526
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.647
0.526
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.647
0.526
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.647
0.526
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.647
0.526
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.647
0.526
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.647
0.526
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.647
0.526
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.647
0.526
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.647
0.526
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.647
0.526
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.647
0.526
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.647
0.526
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.647
0.526
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.647
0.526
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.647
0.526
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.647
0.526
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.647
0.526
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.647
0.526
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.647
0.526
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.647
0.526
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.647
0.526
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.647
0.526
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.647
0.526
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.647
0.526
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.647
0.526
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG
CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.647
0.509
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK
MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.647
0.509
DRGX
M03199_2.00
Homo sapiens
NTAATTNRATTAN
NTAATYNAATTAN
SELEX
Jolma et al.(2013)
DRGX_1
0.645
0.491
DRGX
M05253_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
DRGX_eDBD_HT-SELEX
0.645
0.491
Drgx
M10774_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRRXL1_01
0.645
0.491
DRGX
M05254_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
DRGX_eDBD_Methyl-HT-SELEX
0.645
0.491
CG2808
M03875_2.00
Drosophila melanogaster
TAATYNSRTTA
TAAYSNRATTA
SELEX
Nitta et al.(2015)
CG2808_1
0.645
0.474
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR
YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.645
0.491
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR
YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.645
0.491
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR
YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.645
0.491
PHDP
M03849_2.00
Drosophila melanogaster
NTAATKNVATTAN
NTAATBNMATTAN
SELEX
Nitta et al.(2015)
PHDP_1
0.645
0.474
PHDP
M06525_2.00
Drosophila melanogaster
HTAATTD
HAATTAD
B1H
Mathelier et al.(2014)
MA0457.1
0.645
0.474
PHDP
M06325_2.00
Drosophila melanogaster
HTAATT
AATTAD
B1H
Zhu et al.(2011)
PhdP_Cell_FBgn0025334
0.645
0.474
PHDP
M06326_2.00
Drosophila melanogaster
YTAATT
AATTAR
B1H
Zhu et al.(2011)
PhdP_SOLEXA_FBgn0025334
0.645
0.474
Alx1
M00471_2.00
Mus musculus
NTAATTRN
NYAATTAN
PBM
Berger et al.(2008)
Cart1_0997
0.644
0.474
Alx1
M00472_2.00
Mus musculus
NTAATDDN
NHHATTAN
PBM
Berger et al.(2008)
Cart1_1275
0.644
0.474
Alx4
M00487_2.00
Mus musculus
NTAATDDN
NHHATTAN
PBM
Berger et al.(2008)
Alx4_1744
0.644
0.474
ALX4
M03079_2.00
Homo sapiens
NTAATYNRRTTAN
NTAAYYNRATTAN
SELEX
Jolma et al.(2013)
ALX4_1
0.644
0.474
ALX1
M03226_2.00
Homo sapiens
NTAATTRVRTTAN
NTAAYBYAATTAN
SELEX
Jolma et al.(2013)
CART1_1
0.644
0.474
Alx1
M03272_2.00
Mus musculus
NNTAATTRRD
HYYAATTANN
SELEX
Jolma et al.(2013)
Alx1_1
0.644
0.474
Alx1
M03273_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx1_2
0.644
0.474
Alx4
M03278_2.00
Mus musculus
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
Alx4_1
0.644
0.474
ALX1
M05327_2.00
Homo sapiens
TAATYTAATTA
TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_HT-SELEX
0.644
0.474
ALX4
M04917_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_HT-SELEX
0.644
0.474
ALX1
M09160_2.00
Homo sapiens
VTAATYRVATTA
TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_HUMAN.H11MO.0.B
0.644
0.474
Alx1
M09201_2.00
Mus musculus
VTAATYRVATTA
TAATBYRATTAB
Misc
Kulakovskiy et al.(2013)
ALX1_MOUSE.H11MO.0.B
0.644
0.474
ALX4
M10637_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ALX4_01
0.644
0.474
ALX1
M10741_2.00
Homo sapiens
VVHTAATKNNHATTABYN
NRVTAATDNNMATTADBB
Transfac
Matys et al.(2006)
V$CART1_01
0.644
0.474
ALX1
M05328_2.00
Homo sapiens
TAATYTAATTA
TAATTARATTA
SELEX
Yin et al.(2017)
ALX1_FL_Methyl-HT-SELEX
0.644
0.474
ALX4
M04918_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_1
0.644
0.474
ALX4
M04919_2.00
Homo sapiens
NTWAYGHN
NDCRTWAN
SELEX
Yin et al.(2017)
ALX4_eDBD_Methyl-HT-SELEX_2
0.644
0.474
Alx3
M00402_2.00
Mus musculus
WAATNDN
NHNATTW
PBM
Berger et al.(2008)
Alx3_3418
0.644
0.456
ALX3
M03172_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_1
0.644
0.456
ALX3
M03173_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ALX3_2
0.644
0.456
ALX3
M03174_2.00
Homo sapiens
NTAATYNRATTAN
NTAATYNRATTAN
SELEX
Jolma et al.(2013)
ALX3_3
0.644
0.456
ALX3
M05195_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_HT-SELEX
0.644
0.456
ALX3
M05198_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_HT-SELEX
0.644
0.456
ALX3
M05196_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_1
0.644
0.456
ALX3
M05197_2.00
Homo sapiens
NTAAYBHN
NDVRTTAN
SELEX
Yin et al.(2017)
ALX3_eDBD_Methyl-HT-SELEX_2
0.644
0.456
ALX3
M05199_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_1
0.644
0.456
ALX3
M05200_2.00
Homo sapiens
NTAAYGHN
NDCRTTAN
SELEX
Yin et al.(2017)
ALX3_FL_Methyl-HT-SELEX_2
0.644
0.456
Hoxa1
M00450_2.00
Mus musculus
NHRATKRNN
NNYMATYDN
PBM
Berger et al.(2008)
Hoxa1_3425
0.644
0.544
O76842_CUPSA
M02199_2.00
Cupiennius salei
TTAATTAB
VTAATTAA
PBM
Weirauch et al.(2014)
pTH6251
0.644
0.544
HOXA1
M03096_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
HOXA1_1
0.644
0.544
lab
M03797_2.00
Drosophila melanogaster
NTAATTAS
STAATTAN
SELEX
Nitta et al.(2015)
lab_1
0.644
0.544
HOXA1
M04959_2.00
Homo sapiens
NTMATKAN
NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX
0.644
0.544
HOXB1
M05057_2.00
Homo sapiens
NTAATTAS
STAATTAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_HT-SELEX
0.644
0.544
lab
M06493_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Mathelier et al.(2014)
MA0230.1
0.644
0.544
lab
M06260_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522
0.644
0.544
lab
M06261_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522
0.644
0.544
HOXA1
M09133_2.00
Homo sapiens
NKGATGGATG
CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C
0.644
0.544
Hoxa1
M09196_2.00
Mus musculus
NKGATGGATG
CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C
0.644
0.544
HOXA1
M04960_2.00
Homo sapiens
NTMATKAN
NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1
0.644
0.544
HOXA1
M04961_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2
0.644
0.544
HOXB1
M05058_2.00
Homo sapiens
GTAATBAN
NTVATTAC
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_1
0.644
0.544
HOXB1
M05059_2.00
Homo sapiens
NTRAYGMB
VKCRTYAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_2
0.644
0.544
CG32532
M03874_2.00
Drosophila melanogaster
NTAAYBNVRTTAN
NTAAYBNVRTTAN
SELEX
Nitta et al.(2015)
CG32532_1
0.643
0.491
CG32532
M06547_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Mathelier et al.(2014)
MA0179.1
0.643
0.491
CG32532
M06370_2.00
Drosophila melanogaster
YTAATTR
YAATTAR
B1H
Zhu et al.(2011)
CG32532_Cell_FBgn0052532
0.643
0.491
CG32532
M06371_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
CG32532_SOLEXA_FBgn0052532
0.643
0.491
PHOX2B
M00281_2.00
Homo sapiens
NNNNNNNNRY
RYNNNNNNNN
PBM
Barrera et al.(2016)
PHOX2B_R141Q
0.643
0.491
PHOX2B
M00282_2.00
Homo sapiens
TAATTRRY
RYYAATTA
PBM
Barrera et al.(2016)
PHOX2B_REF
0.643
0.474
Phox2a
M00400_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2a_3947
0.643
0.474
Phox2b
M00401_2.00
Mus musculus
NNHAAYNN
NNRTTDNN
PBM
Berger et al.(2008)
Phox2b_3948
0.643
0.474
PHOX2A
M03194_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2A_1
0.643
0.474
PHOX2B
M03113_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_1
0.643
0.474
PHOX2B
M03114_2.00
Homo sapiens
TAATTRVRTTA
TAAYBYAATTA
SELEX
Jolma et al.(2013)
PHOX2B_2
0.643
0.474
PHOX2A
M05244_2.00
Homo sapiens
NTAATTRV
BYAATTAN