CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NKX6-1
(
Sus scrofa
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSSSCG00000009232
T215815_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Nkx6-1
M00466_2.00
Mus musculus
NDTDATNRN
NYNATHAHN
PBM
Berger et al.(2008)
Nkx6-1_2825
0.377
1.000
NKX6-1
M09151_2.00
Homo sapiens
RAHWRATKDSNWWWTRATD
HATYAWWWNSHMATYWDTY
Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B
0.377
1.000
Nkx6-1
M09200_2.00
Mus musculus
HNWRATKDNHWWWTRATDR
YHATYAWWWDNHMATYWND
Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A
0.377
1.000
Nkx6-1
M09573_2.00
Mus musculus
NDTAATKR
YMATTAHN
Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975
0.377
1.000
NKX6-1
M10718_2.00
Homo sapiens
HWTTTAATKGRWT
AWYCMATTAAAWD
Transfac
Matys et al.(2006)
V$NKX61_01
0.377
1.000
NKX6-1
M10719_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX61_08
0.377
1.000
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000009845
Homeodomain
238
283
KHTRPTFSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKV
Links
Other
Homeodomain
family TFs
Other
Sus scrofa
TFs
124 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSECAG00000018325
Equus caballus
ENSECAG00000018325
I
0.867
ENSOANG00000006212
Ornithorhynchus anatinus
ENSOANG00000006212
I
0.867
ENSPFOG00000002761
Poecilia formosa
ENSPFOG00000002761
I
0.867
ENSAPLG00000005538
Anas platyrhynchos
ENSAPLG00000005538
I
0.858
ENSSHAG00000002937
Sarcophilus harrisii
ENSSHAG00000002937
I
0.858
Gfo_R008628
Geospiza fortis
Gfo_R008628
I
0.858
AAEL004033
Aedes aegypti
AAEL004033
N
0.855
SINV25324
Solenopsis invicta
SINV25324
I
0.855
Ocbimv22025901m.g
Octopus bimaculoides
Ocbimv22025901m.g
N
0.855
CLEC002616
Cimex lectularius
CLEC002616
N
0.855
Sjc_0111830
Schistosoma japonicum
Sjc_0111830
N
0.855
NKX6-1
Choloepus hoffmanni
ENSCHOG00000005454
I
0.849
ENSMICG00000006922
Microcebus murinus
ENSMICG00000006922
I
0.849
Myotis_brandtii_NKX6_10030510
Myotis brandtii
Myotis_brandtii_NKX6_10030510
N
0.849
ENSMEUG00000009353
Macropus eugenii
ENSMEUG00000009353
I
0.840
NKX6-2
Procavia capensis
ENSPCAG00000000708
N
0.840
CpipJ_CPIJ001377
Culex pipiens
CpipJ_CPIJ001377
N
0.837
ACEP17328
Atta cephalotes
ACEP17328
N
0.837
BGIBMGA010051
Bombyx mori
BGIBMGA010051
N
0.837
CapteG6193
Capitella teleta
CapteG6193
N
0.837
CPIJ001377
Culex quinquefasciatus
CPIJ001377
N
0.837
KGM_13904
Danaus plexippus
KGM_13904
N
0.837
MCINX004710
Melitaea cinxia
MCINX004710
N
0.837
PHUM359870
Pediculus humanus
PHUM359870
N
0.837
YQE_09155
Dendroctonus ponderosae
YQE_09155
N
0.837
Hsal_06171--XP_001121097.1_APIME
Harpegnathos saltator
Hsal_06171--XP_001121097.1_APIME
N
0.837
HHAL007703-PA
Halyomorpha halys
HHAL007703-PA
N
0.837
LCUP008694
Lucilia cuprina
LCUP008694
N
0.837
LDEC017209
Leptinotarsa decemlineata
LDEC017209
N
0.837
AALB008452
Anopheles albimanus
AALB008452
N
0.837
AATE008437
Anopheles atroparvus
AATE008437
N
0.837
ACUA026159
Anopheles culicifacies
ACUA026159
N
0.837
ADIR006386
Anopheles dirus
ADIR006386
N
0.837
AEPI002734
Anopheles epiroticus
AEPI002734
N
0.837
AFAF005788
Anopheles farauti
AFAF005788
N
0.837
AMAM013696
Anopheles maculatus
AMAM013696
N
0.837
AMEC022035
Anopheles melas
AMEC022035
N
0.837
AMEM013182
Anopheles merus
AMEM013182
N
0.837
AQUA009532
Anopheles quadriannulatus
AQUA009532
N
0.837
ASIS022603
Anopheles sinensis
ASIS022603
N
0.837
PPAI007703
Phlebotomus papatasi
PPAI007703
N
0.837
A_02867
Schistosoma haematobium
A_02867
N
0.837
ECPE_0000358001
Echinostoma caproni
ECPE_0000358001
N
0.837
SCUD_0002097601
Schistosoma curassoni
SCUD_0002097601
N
0.837
SROB_0001257001
Schistosoma rodhaini
SROB_0001257001
N
0.837
PXEA_0000446101
Protopolystoma xenopodis
PXEA_0000446101
N
0.835
ANCDUO_24100
Ancylostoma duodenale
ANCDUO_24100
N
0.812
ASIM_0001695301
Anisakis simplex
ASIM_0001695301
N
0.812
TCNE_0001839401
Toxocara canis
TCNE_0001839401
N
0.812
ISCW014430
Ixodes scapularis
ISCW014430
N
0.802
D917_05078
Trichinella nativa
D917_05078
N
0.796
D917_08408
Trichinella nativa
D917_08408
N
0.796
WUBG_08661
Wuchereria bancrofti
WUBG_08661
N
0.794
DICVIV_02945
Dictyocaulus viviparus
DICVIV_02945
N
0.794
AMIN002697
Anopheles minimus
AMIN002697
N
0.793
TRE_0000644601
Trichobilharzia regenti
TRE_0000644601
N
0.790
nRc.2.0.1.g06912
Romanomermis culicivorax
nRc.2.0.1.g06912
N
0.784
Afo_R002915
Aptenodytes forsteri
Afo_R002915
N
0.774
Ppa-cog-1
Pristionchus pacificus
PPA04716
N
0.765
EVEC_0000660801
Enterobius vermicularis
EVEC_0000660801
N
0.765
nLs.2.1.2.g06018
Litomosoides sigmodontis
nLs.2.1.2.g06018
N
0.761
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0
N
0.755
Bm5188
Brugia malayi
Bm5188
N
0.750
OFLC_0001516501
Onchocerca flexuosa
OFLC_0001516501
N
0.750
scaffold37-EXSNAP2012.8
Pristionchus exspectatus
scaffold37-EXSNAP2012.8
N
0.708
ENSOARG00000007317
Ovis aries
ENSOARG00000007317
N
0.638
MESCA000156
Megaselia scalaris
MESCA000156
I
0.617
Sjc_0024500
Schistosoma japonicum
Sjc_0024500
I
0.606
SCUD_0002260901
Schistosoma curassoni
SCUD_0002260901
I
0.606
SMTD_0002181901
Schistosoma mattheei
SMTD_0002181901
I
0.606
ACUA001481
Anopheles culicifacies
ACUA001481
I
0.601
ENSAMEG00000003692
Ailuropoda melanoleuca
ENSAMEG00000003692
I
0.377
ENSAMXG00000001095
Astyanax mexicanus
ENSAMXG00000001095
I
0.377
NKX6-1
Bos taurus
ENSBTAG00000002518
I
0.377
NKX6-1
Canis familiaris
ENSCAFG00000009157
I
0.377
NKX6-1
Callithrix jacchus
ENSCJAG00000005335
I
0.377
ENSCPOG00000026192
Cavia porcellus
ENSCPOG00000026192
I
0.377
ENSCSAG00000004373
Chlorocebus sabaeus
ENSCSAG00000004373
I
0.377
nkx6.1
Danio rerio
ENSDARG00000022569
I
0.377
NKX6-1
Dasypus novemcinctus
ENSDNOG00000014879
I
0.377
Nkx6-1
Dipodomys ordii
ENSDORG00000004413
I
0.377
NKX6-1
Equus caballus
ENSECAG00000021703
I
0.377
ENSFALG00000005328
Ficedula albicollis
ENSFALG00000005328
I
0.377
ENSFCAG00000028918
Felis catus
ENSFCAG00000028918
I
0.377
NKX6-1
Homo sapiens
ENSG00000163623
D
0.377
nkx6.1
Gasterosteus aculeatus
ENSGACG00000013430
I
0.377
NKX6-1
Gorilla gorilla
ENSGGOG00000008459
I
0.377
ENSGMOG00000012973
Gadus morhua
ENSGMOG00000012973
I
0.377
ENSLACG00000010778
Latimeria chalumnae
ENSLACG00000010778
I
0.377
ENSLAFG00000030127
Loxodonta africana
ENSLAFG00000030127
I
0.377
ENSLOCG00000012142
Lepisosteus oculatus
ENSLOCG00000012142
I
0.377
ENSMEUG00000004857
Macropus eugenii
ENSMEUG00000004857
I
0.377
NKX6-1
Myotis lucifugus
ENSMLUG00000012584
I
0.377
ENSMMUG00000021161
Macaca mulatta
ENSMMUG00000021161
I
0.377
NKX6-1
Monodelphis domestica
ENSMODG00000020778
I
0.377
ENSMPUG00000010488
Mustela putorius furo
ENSMPUG00000010488
I
0.377
Nkx6-1
Mus musculus
ENSMUSG00000035187
D
0.377
ENSNLEG00000009157
Nomascus leucogenys
ENSNLEG00000009157
I
0.377
NKX6-1
Oryctolagus cuniculus
ENSOCUG00000028183
I
0.377
NKX6-1
Otolemur garnettii
ENSOGAG00000000028
I
0.377
ENSONIG00000012511
Oreochromis niloticus
ENSONIG00000012511
I
0.377
ENSORLG00000019018
Oryzias latipes
ENSORLG00000019018
I
0.377
ENSPANG00000025577
Papio anubis
ENSPANG00000025577
I
0.377
ENSPPYG00000014901
Pongo abelii
ENSPPYG00000014901
I
0.377
ENSPSIG00000015332
Pelodiscus sinensis
ENSPSIG00000015332
I
0.377
NKX6-1
Pan troglodytes
ENSPTRG00000016239
I
0.377
Nkx6-1
Rattus norvegicus
ENSRNOG00000002149
I
0.377
ENSSHAG00000014919
Sarcophilus harrisii
ENSSHAG00000014919
I
0.377
ENSSTOG00000012588
Ictidomys tridecemlineatus
ENSSTOG00000012588
I
0.377
ENSTGUG00000002130
Taeniopygia guttata
ENSTGUG00000002130
I
0.377
nkx6.1
Tetraodon nigroviridis
ENSTNIG00000009010
I
0.377
nkx6.1
Takifugu rubripes
ENSTRUG00000002910
I
0.377
ENSTRUG00000018647
Takifugu rubripes
ENSTRUG00000018647
I
0.377
nkx6.1
Takifugu rubripes
ENSTRUG00000018648
I
0.377
ENSTSYG00000009252
Tarsius syrichta
ENSTSYG00000009252
I
0.377
NKX6-1
Tursiops truncatus
ENSTTRG00000001971
I
0.377
ENSXMAG00000012212
Xiphophorus maculatus
ENSXMAG00000012212
I
0.377
Alligator_sinensis_CCG001589.1
Alligator sinensis
Alligator_sinensis_CCG001589.1
I
0.377
ENSBTAP00000003266-D2
Bos grunniens
ENSBTAP00000003266-D2
I
0.377
ENSMMUP00000027862
Macaca fascicularis
ENSMMUP00000027862
I
0.377
Ogr08540
Ophisaurus gracilis
Ogr08540
I
0.377
estExt_GenewiseH_1.C_2940047
Branchiostoma floridae
estExt_GenewiseH_1.C_2940047
I
0.377
nkx6-1
Xenopus tropicalis
XB-GENE-483574
I
0.377
nkx6-1.L
Xenopus laevis
XB-GENE-864993
I
0.377