CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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mkxb
(
Takifugu rubripes
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSTRUG00000004166
T216637_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07914
M02132_2.00
Fusarium graminearum
NNKACATGTHN
NDACATGTMNN
PBM
Weirauch et al.(2014)
pTH6329
0.653
0.435
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTRUP00000009865
Homeodomain
82
127
LKHWLYKHRDNPYPTKTEKVLLALGSHMTLVQVSNWFANARRRLKN
ENSTRUP00000009866
Homeodomain
21
66
LKHWLYKHRDNPYPTKTEKVLLALGSHMTLVQVSNWFANARRRLKN
Links
Other
Homeodomain
family TFs
Other
Takifugu rubripes
TFs
97 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERF019
Arabidopsis thaliana
AT1G22810
D
POPTR_0013s10420
Populus trichocarpa
POPTR_0013s10420
I
ERF020
Arabidopsis thaliana
AT1G71520
I
POPTR_0019s10220
Populus trichocarpa
POPTR_0019s10220
I
scaffold_102587.1
Arabidopsis lyrata
scaffold_102587.1
I
TCM_036224
Theobroma cacao
TCM_036224
I
Ca_15055
Cicer arietinum
Ca_15055
I
Cla012182
Citrullus lanatus
Cla012182
I
29938.m000611
Ricinus communis
29938.m000611
I
cassava8476.m1
Manihot esculenta
cassava8476.m1
I
mgf010891m
Mimulus guttatus
mgf010891m
I
Bostr.10273s0198
Boechera stricta
Bostr.10273s0198
I
Bostr.12659s0135
Boechera stricta
Bostr.12659s0135
I
Cagra.0114s0023
Capsella grandiflora
Cagra.0114s0023
I
Cagra.2418s0007
Capsella grandiflora
Cagra.2418s0007
I
Carubv10011955m.g
Capsella rubella
Carubv10011955m.g
I
Carubv10022408m.g
Capsella rubella
Carubv10022408m.g
I
Ciclev10023345m.g
Citrus clementina
Ciclev10023345m.g
I
Eucgr.F02967
Eucalyptus grandis
Eucgr.F02967
I
Lus10006179.g
Linum usitatissimum
Lus10006179.g
I
Lus10009468.g
Linum usitatissimum
Lus10009468.g
I
Lus10041044.g
Linum usitatissimum
Lus10041044.g
I
orange1.1g045327m.g
Citrus sinensis
orange1.1g045327m.g
I
SapurV1A.2173s0020
Salix purpurea
SapurV1A.2173s0020
I
SapurV1A.3847s0010
Salix purpurea
SapurV1A.3847s0010
I
SapurV1A.4200s0010
Salix purpurea
SapurV1A.4200s0010
I
Thhalv10009842m.g
Eutrema salsugineum
Thhalv10009842m.g
I
Thhalv10019510m.g
Eutrema salsugineum
Thhalv10019510m.g
I
chr2.CM0018.340.nd
Lotus japonicus
chr2.CM0018.340.nd
I
Bra012345
Brassica rapa
Bra012345
I
GLYMA11G01700
Glycine max
GLYMA11G01700
I
fgenesh2_kg.2__1411__AT1G71520.1
Arabidopsis lyrata
fgenesh2_kg.2__1411__AT1G71520.1
I
MTR_5g008790
Medicago truncatula
MTR_5g008790
I
Bra024539
Brassica rapa
Bra024539
I
Bra016133
Brassica rapa
Bra016133
I
Bra007974
Brassica rapa
Bra007974
I
Bo7g057680
Brassica oleracea
Bo7g057680
I
Bo6g113060
Brassica oleracea
Bo6g113060
I
Bo5g038890
Brassica oleracea
Bo5g038890
I
Bo2g072950
Brassica oleracea
Bo2g072950
I
Pavir.J06813
Panicum virgatum
Pavir.J06813
N
MDP0000932292
Malus domestica
MDP0000932292
N
GSMUA_Achr10G04450_001
Musa acuminata
GSMUA_Achr10G04450_001
N
Gorai.009G266200
Gossypium raimondii
Gorai.009G266200
N
gene27062-v1.0-hybrid
Fragaria vesca
gene27062-v1.0-hybrid
N
BRADI2G25050
Brachypodium distachyon
BRADI2G25050
N
BRADI2G57200
Brachypodium distachyon
BRADI2G57200
N
BGIOSGA018034
Oryza indica
BGIOSGA018034
N
BGIOSGA004939
Oryza indica
BGIOSGA004939
N
ONIVA01G44590
Oryza nivara
ONIVA01G44590
N
PGSC0003DMG400008734
Solanum tuberosum
PGSC0003DMG400008734
N
OS01G0885900
Oryza sativa
OS01G0885900
N
ORUFI01G43070
Oryza rufipogon
ORUFI01G43070
N
PRUPE_ppa020605mg
Prunus persica
PRUPE_ppa020605mg
N
Sb03g042060
Sorghum bicolor
Sb03g042060
N
ORGLA05G0145800
Oryza glaberrima
ORGLA05G0145800
N
OPUNC05G14870
Oryza punctata
OPUNC05G14870
N
TRAES3BF106000020CFD_g
Triticum aestivum
TRAES3BF106000020CFD_g
N
ONIVA05G17560
Oryza nivara
ONIVA05G17560
N
GRMZM2G307152
Zea mays
GRMZM2G307152
N
Pm004265
Prunus mume
Pm004265
N
OMERI01G36600
Oryza meridionalis
OMERI01G36600
N
OGLUM01G43950
Oryza glumaepatula
OGLUM01G43950
N
Cucsa.088640
Cucumis sativus
Cucsa.088640
N
OB01G48490
Oryza brachyantha
OB01G48490
N
Aquca_001_00483
Aquilegia coerulea
Aquca_001_00483
N
GSMUA_Achr3G21790_001
Musa acuminata
GSMUA_Achr3G21790_001
N
OS05G0420300
Oryza sativa
OS05G0420300
N