CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

exex *(Drosophila melanogaster)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	FBgn0041156	T217512_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
exex M03871_2.00	Drosophila melanogaster	NNNNYAATTNNYDN	NHRNNAATTRNNNN	SELEX Nitta et al.(2015) exex_1	(Direct)	(Direct)
exex M06364_2.00	Drosophila melanogaster	TAATTAV	BTAATTA	B1H Zhu et al.(2011) Exex_Cell_FBgn0041156	(Direct)	(Direct)
exex M06365_2.00	Drosophila melanogaster	TAATBR	YVATTA	B1H Zhu et al.(2011) Exex_SOLEXA_FBgn0041156	(Direct)	(Direct)
exex M06544_2.00	Drosophila melanogaster	BTAATTA	TAATTAV	B1H Mathelier et al.(2014) MA0224.1	(Direct)	(Direct)
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Mnx1 M00388_2.00	Mus musculus	NTAATBDNNN	NNNHVATTAN	PBM Berger et al.(2008) Hlxb9_3422	0.850	0.912
MNX1 M03143_2.00	Homo sapiens	NHTAATTRNH	DNYAATTADN	SELEX Jolma et al.(2013) MNX1_1	0.850	0.912
MNX1 M05126_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_HT-SELEX	0.850	0.912
MNX1 M05127_2.00	Homo sapiens	HTAAYGHB	VDCRTTAD	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_1	0.850	0.912
MNX1 M05128_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MNX1_eDBD_Methyl-HT-SELEX_2	0.850	0.912
HOXA2 M02083_2.00	Homo sapiens	NNNDHHNNN	NNNDDHNNN	PBM Weirauch et al.(2014) pTH5887	0.797	0.684
Hoxa2 M00403_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa2_3079	0.797	0.684
HOXA2 M03097_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXA2_1	0.797	0.684
HOXB2 M03213_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) HOXB2_1	0.797	0.684
Hoxa2 M03251_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxa2_1	0.797	0.684
pb M03872_2.00	Drosophila melanogaster	NTRAYKRY	RYMRTYAN	SELEX Nitta et al.(2015) pb_1	0.797	0.684
HOXA2 M04962_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_HT-SELEX	0.797	0.684
HOXA2 M04965_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_HT-SELEX	0.797	0.684
HOXB2 M05292_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB2_eDBD_HT-SELEX	0.797	0.684
pb M06545_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0238.1	0.797	0.684
pb M06366_2.00	Drosophila melanogaster	BYTAATKA	TMATTARV	B1H Zhu et al.(2011) Pb_Cell_FBgn0051481	0.797	0.684
pb M06367_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Pb_SOLEXA_FBgn0051481	0.797	0.684
Hoxa2 M09566_2.00	Mus musculus	DTGATKGATKDB	VHMATCMATCAH	Misc Heinz et al.(2010) mES-Hoxa2_Donaldson_et_al.	0.797	0.684
HOXA2 M04963_2.00	Homo sapiens	NTAATTAN	NTAATTAN	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_1	0.797	0.684
HOXA2 M04964_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_eDBD_Methyl-HT-SELEX_2	0.797	0.684
HOXA2 M04966_2.00	Homo sapiens	NTAATKAB	VTMATTAN	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_1	0.797	0.684
HOXA2 M04967_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXA2_FL_Methyl-HT-SELEX_2	0.797	0.684
HOXB2 M05293_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_1	0.797	0.684
HOXB2 M05294_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) HOXB2_eDBD_Methyl-HT-SELEX_2	0.797	0.684
eve M00556_2.00	Drosophila melanogaster	NNTAATTARN	NYTAATTANN	PBM Busser et al.(2012a) Eve	0.790	0.596
eve M02115_2.00	Drosophila melanogaster	NTAATNDNN	NNHNATTAN	PBM Weirauch et al.(2014) pTH6436	0.790	0.596
eve M03794_2.00	Drosophila melanogaster	VYTAATKASN	NSTMATTARB	SELEX Nitta et al.(2015) eve_1	0.790	0.596
eve M06486_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0221.1	0.790	0.596
eve M06240_2.00	Drosophila melanogaster	DYTAATKA	TMATTARH	B1H Zhu et al.(2011) Eve_Cell_FBgn0000606	0.790	0.596
eve M06241_2.00	Drosophila melanogaster	HKBTAAYNDTKY	RMAHNRTTAVMD	B1H Zhu et al.(2011) eve_FlyReg_FBgn0000606	0.790	0.596
eve M06242_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Eve_SOLEXA_FBgn0000606	0.790	0.596
eve M09678_2.00	Drosophila melanogaster	NKHTAATKD	HMATTADMN	Misc Kulakovskiy et al.(2009) eve	0.790	0.596
eve M10786_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EVE_Q6	0.790	0.596
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.777	0.649
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.777	0.649
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.777	0.649
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.777	0.649
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.777	0.649
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.777	0.649
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.777	0.649
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.777	0.649
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.777	0.649
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.777	0.649
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.777	0.649
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.777	0.649
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.777	0.649
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.777	0.649
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.777	0.649
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.777	0.649
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.777	0.649
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.777	0.649
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.777	0.649
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.777	0.649
Meox1 M00384_2.00	Mus musculus	NTRATKRNN	NNYMATYAN	PBM Berger et al.(2008) Meox1_2310	0.774	0.632
MEOX1 M03077_2.00	Homo sapiens	NNTAATTASN	NSTAATTANN	SELEX Jolma et al.(2013) MEOX1_1	0.774	0.632
MEOX1 M04901_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_1	0.774	0.632
MEOX1 M04902_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) MEOX1_FL_HT-SELEX_2	0.774	0.632
MEOX1 M04903_2.00	Homo sapiens	NTAAYGWB	VWCRTTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_1	0.774	0.632
MEOX1 M04904_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) MEOX1_FL_Methyl-HT-SELEX_2	0.774	0.632
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.762	0.614
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.762	0.614
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.762	0.614
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.762	0.614
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.762	0.614
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.762	0.614
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.762	0.614
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.760	0.649
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.760	0.649
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.760	0.649
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.760	0.649
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.760	0.649
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.759	0.649
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.759	0.649
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.759	0.632
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.759	0.632
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.759	0.632
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.759	0.632
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.759	0.632
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.759	0.632
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.759	0.632
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.759	0.632
btn M03832_2.00	Drosophila melanogaster	NNTAATKANB	VNTMATTANN	SELEX Nitta et al.(2015) btn_1	0.758	0.561
btn M03833_2.00	Drosophila melanogaster	VNTAATKABN	NVTMATTANB	SELEX Nitta et al.(2015) btn_2	0.758	0.561
btn M06515_2.00	Drosophila melanogaster	DTAATKA	TMATTAH	B1H Mathelier et al.(2014) MA0215.1	0.758	0.561
btn M06307_2.00	Drosophila melanogaster	NDTAATKA	TMATTAHN	B1H Zhu et al.(2011) Btn_Cell_FBgn0014949	0.758	0.561
btn M06308_2.00	Drosophila melanogaster	HTAATKA	TMATTAD	B1H Zhu et al.(2011) Btn_SOLEXA_FBgn0014949	0.758	0.561
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.756	0.632
Gbx2 M00462_2.00	Mus musculus	NNDAHNN	NNDTHNN	PBM Berger et al.(2008) Gbx2_3110	0.749	0.702
Gbx1 M00525_2.00	Mus musculus	NNTAATNR	YNATTANN	PBM Berger et al.(2008) Gbx1_2883	0.749	0.702
GBX1 M03193_2.00	Homo sapiens	NBTAATTRSB	VSYAATTAVN	SELEX Jolma et al.(2013) GBX1_1	0.749	0.702
GBX2 M03201_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_1	0.749	0.702
GBX2 M03202_2.00	Homo sapiens	TAATTRVBCAATWA	TWATTGVBYAATTA	SELEX Jolma et al.(2013) GBX2_2	0.749	0.702
GBX2 M03203_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) GBX2_3	0.749	0.702
Gbx1 M03286_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx1_1	0.749	0.702
Gbx2 M03268_2.00	Mus musculus	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) Gbx2_1	0.749	0.702
GBX2 M05265_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_HT-SELEX	0.749	0.702
GBX2 M05268_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) GBX2_FL_HT-SELEX	0.749	0.702
GBX2 M05266_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_1	0.749	0.702
GBX2 M05267_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_eDBD_Methyl-HT-SELEX_2	0.749	0.702
GBX2 M05269_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_1	0.749	0.702
GBX2 M05270_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GBX2_FL_Methyl-HT-SELEX_2	0.749	0.702
unpg M03836_2.00	Drosophila melanogaster	SSTAATYRVN	NBYRATTASS	SELEX Nitta et al.(2015) unpg_1	0.749	0.684
unpg M06517_2.00	Drosophila melanogaster	BTAATTR	YAATTAV	B1H Mathelier et al.(2014) MA0251.1	0.749	0.684
unpg M06311_2.00	Drosophila melanogaster	NBTAATTR	YAATTAVN	B1H Zhu et al.(2011) Unpg_Cell_FBgn0015561	0.749	0.684
unpg M06312_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Unpg_SOLEXA_FBgn0015561	0.749	0.684
Evx2 M00393_2.00	Mus musculus	NNTAAYNN	NNRTTANN	PBM Berger et al.(2008) Evx2_2645	0.745	0.596
Evx1 M00395_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Evx1_3952	0.745	0.596
EVX1 M03102_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX1_1	0.745	0.596
EVX2 M03215_2.00	Homo sapiens	NNTAATBRBN	NVYVATTANN	SELEX Jolma et al.(2013) EVX2_1	0.745	0.596
EVX1 M04985_2.00	Homo sapiens	VTAATKAB	VTMATTAB	SELEX Yin et al.(2017) EVX1_eDBD_HT-SELEX	0.745	0.596
EVX2 M05295_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_HT-SELEX	0.745	0.596
EVX2 M09158_2.00	Homo sapiens	NBTTTATKRCHNN	NNDGYMATAAAVN	Misc Kulakovskiy et al.(2013) EVX2_HUMAN.H11MO.0.A	0.745	0.596
Evx1 M09174_2.00	Mus musculus	WGATTTATDRBHN	NDVYHATAAATCW	Misc Kulakovskiy et al.(2013) EVX1_MOUSE.H11MO.0.C	0.745	0.596
Evx2 M09173_2.00	Mus musculus	BTTTATKRCHBN	NVDGYMATAAAV	Misc Kulakovskiy et al.(2013) EVX2_MOUSE.H11MO.0.A	0.745	0.596
EVX2 M10736_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$EVX2_04	0.745	0.596
EVX1 M04986_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_1	0.745	0.596
EVX1 M04987_2.00	Homo sapiens	HTWAYGAB	VTCRTWAD	SELEX Yin et al.(2017) EVX1_eDBD_Methyl-HT-SELEX_2	0.745	0.596
EVX2 M05296_2.00	Homo sapiens	NTAATKAN	NTMATTAN	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_1	0.745	0.596
EVX2 M05297_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) EVX2_eDBD_Methyl-HT-SELEX_2	0.745	0.596
vab-7 M02186_2.00	Caenorhabditis elegans	KTAATTAK	MTAATTAM	PBM Weirauch et al.(2014) pTH6104	0.745	0.526
ventx1.2.S M10805_2.00	Xenopus laevis	RSRMAAATWBBVS	SBBBWATTTKYSY	Transfac Matys et al.(2006) V$XVENT1_01	0.736	0.596
Barx1 M00413_2.00	Mus musculus	NNTAAYBDNN	NNHVRTTANN	PBM Berger et al.(2008) Barx1_2877	0.732	0.596
barx1 M02107_2.00	Tetraodon nigroviridis	NTAAYNNNN	NNNNRTTAN	PBM Weirauch et al.(2014) pTH6449	0.732	0.596
BARX1 M03144_2.00	Homo sapiens	TAATBGNWWWTTAATBR	YVATTAAWWWNCVATTA	SELEX Jolma et al.(2013) BARX1_1	0.732	0.596
BARX1 M03145_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BARX1_2	0.732	0.596
Barx1 M09181_2.00	Mus musculus	NNWAAKKGYTWH	DWARCMMTTWNN	Misc Kulakovskiy et al.(2013) BARX1_MOUSE.H11MO.0.C	0.732	0.596
Barx2 M00457_2.00	Mus musculus	NTAABNDNN	NNHNVTTAN	PBM Berger et al.(2008) Barx2_3447	0.732	0.579
BARX2 M04915_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_HT-SELEX	0.732	0.579
BARX2 M04916_2.00	Homo sapiens	NTAAYKRTTWWN	NWWAAYMRTTAN	SELEX Yin et al.(2017) BARX2_FL_Methyl-HT-SELEX	0.732	0.579
MEOX2 M03103_2.00	Homo sapiens	NNTRATKASN	NSTMATYANN	SELEX Jolma et al.(2013) MEOX2_1	0.729	0.596
MEOX2 M03104_2.00	Homo sapiens	NTAATTANVNTAATTAV	BTAATTANBNTAATTAN	SELEX Jolma et al.(2013) MEOX2_2	0.729	0.596
MEOX2 M03105_2.00	Homo sapiens	HTAATGATGATKAN	NTMATCATCATTAD	SELEX Jolma et al.(2013) MEOX2_3	0.729	0.596
Meox2 M03271_2.00	Mus musculus	NTAATKAN	NTMATTAN	SELEX Jolma et al.(2013) Meox2_1	0.729	0.596
MEOX2 M04988_2.00	Homo sapiens	NTDAYGHB	VDCRTHAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_1	0.729	0.596
MEOX2 M04989_2.00	Homo sapiens	NTVATBRV	BYVATBAN	SELEX Yin et al.(2017) MEOX2_FL_HT-SELEX_2	0.729	0.596
Meox2 M10771_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MEOX2_05	0.729	0.596
MEOX2 M04990_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_1	0.729	0.596
MEOX2 M04991_2.00	Homo sapiens	NTVATKRN	NYMATBAN	SELEX Yin et al.(2017) MEOX2_FL_Methyl-HT-SELEX_2	0.729	0.596
ventx3.2 M02232_2.00	Xenopus tropicalis	ATTAATTA	TAATTAAT	PBM Weirauch et al.(2014) pTH6291	0.728	0.544
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.727	0.667
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.727	0.667
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.727	0.667
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.727	0.667
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.727	0.649
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.727	0.649
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.727	0.649
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.727	0.649
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.727	0.649
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.727	0.649
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.727	0.649
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.727	0.649
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.727	0.649
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.727	0.649
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.727	0.649
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.727	0.649
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.727	0.649
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.727	0.649
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.727	0.649
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.727	0.649
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.727	0.649
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.727	0.649
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.727	0.632
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.727	0.632
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.727	0.632
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.727	0.632
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.727	0.632
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.727	0.632
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.727	0.632
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.727	0.632
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.727	0.632
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.727	0.632
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.727	0.632
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.727	0.632
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.727	0.632
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.727	0.632
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.727	0.632
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.727	0.632
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.727	0.632
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.727	0.632
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.727	0.632
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.727	0.632
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.727	0.632
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.727	0.632
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.727	0.632
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.727	0.632
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.727	0.632
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.727	0.632
Q9BJW6_9CNID M02215_2.00	Sarsia sp. Long Island Sound	NBTAATTAVN	NBTAATTAVN	PBM Weirauch et al.(2014) pTH6287	0.726	0.544
lin-39 M08211_2.00	Caenorhabditis elegans	GATTGATG	CATCAATC	ChIP-seq Contrino et al.(2012) Mw154	0.723	0.649
lin-39 M09582_2.00	Caenorhabditis elegans	DTGATWRATK	MATYWATCAH	Misc Heinz et al.(2010) cElegans.L3-LIN39_modEncode	0.723	0.649
Nkx1-1 M00442_2.00	Mus musculus	NNTAATNDNN	NNHNATTANN	PBM Berger et al.(2008) Nkx1-1_3856	0.718	0.614
slou M00557_2.00	Drosophila melanogaster	NNTAATDRN	NYHATTANN	PBM Busser et al.(2012a) Slou	0.718	0.614
slou M03798_2.00	Drosophila melanogaster	VBTAATTRSB	VSYAATTAVB	SELEX Nitta et al.(2015) slou_1	0.718	0.614
slou M06494_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0245.1	0.718	0.614
slou M06262_2.00	Drosophila melanogaster	BYTAATKR	YMATTARV	B1H Zhu et al.(2011) Slou_Cell_FBgn0002941	0.718	0.614
slou M06263_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Zhu et al.(2011) Slou_SOLEXA_FBgn0002941	0.718	0.614
Nkx1-2 M00503_2.00	Mus musculus	NNTAAWNDN	NHNWTTANN	PBM Berger et al.(2008) Nkx1-2_3214	0.717	0.596
CG11085 M03857_2.00	Drosophila melanogaster	BTAAWYGN	NCRWTTAV	SELEX Nitta et al.(2015) CG11085_1	0.716	0.632
CG11085 M03858_2.00	Drosophila melanogaster	NTAAWCGN	NCGWTTAN	SELEX Nitta et al.(2015) CG11085_2	0.716	0.632
CG11085 M06532_2.00	Drosophila melanogaster	TTAATDG	CHATTAA	B1H Mathelier et al.(2014) MA0171.1	0.716	0.632
CG11085 M06339_2.00	Drosophila melanogaster	NTTAATDGV	BCHATTAAN	B1H Zhu et al.(2011) CG11085_Cell_FBgn0030408	0.716	0.632
CG11085 M06340_2.00	Drosophila melanogaster	NHTAAWBRNN	NNYVWTTADN	B1H Zhu et al.(2011) CG11085_SOLEXA_FBgn0030408	0.716	0.632
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.714	0.596
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.714	0.596
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.714	0.596
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.714	0.596
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.714	0.596
HOXB1 M05057_2.00	Homo sapiens	NTAATTAS	STAATTAN	SELEX Yin et al.(2017) HOXB1_eDBD_HT-SELEX	0.714	0.649
HOXB1 M05058_2.00	Homo sapiens	GTAATBAN	NTVATTAC	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_1	0.714	0.649
HOXB1 M05059_2.00	Homo sapiens	NTRAYGMB	VKCRTYAN	SELEX Yin et al.(2017) HOXB1_eDBD_Methyl-HT-SELEX_2	0.714	0.649
Hoxa1 M00450_2.00	Mus musculus	NHRATKRNN	NNYMATYDN	PBM Berger et al.(2008) Hoxa1_3425	0.714	0.632
O76842_CUPSA M02199_2.00	Cupiennius salei	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH6251	0.714	0.632
HOXA1 M03096_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) HOXA1_1	0.714	0.632
HOXA1 M04959_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_HT-SELEX	0.714	0.632
HOXA1 M09133_2.00	Homo sapiens	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_HUMAN.H11MO.0.C	0.714	0.632
Hoxa1 M09196_2.00	Mus musculus	NKGATGGATG	CATCCATCMN	Misc Kulakovskiy et al.(2013) HXA1_MOUSE.H11MO.0.C	0.714	0.632
HOXA1 M04960_2.00	Homo sapiens	NTMATKAN	NTMATKAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_1	0.714	0.632
HOXA1 M04961_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) HOXA1_FL_Methyl-HT-SELEX_2	0.714	0.632
Bsx M00516_2.00	Mus musculus	NTAAYBDNN	NNHVRTTAN	PBM Berger et al.(2008) Bsx_3483	0.713	0.596
bsh M02113_2.00	Drosophila melanogaster	NNTAAYBDNN	NNHVRTTANN	PBM Weirauch et al.(2014) pTH6569	0.713	0.596
BSX M03235_2.00	Homo sapiens	NTAATBRN	NYVATTAN	SELEX Jolma et al.(2013) BSX_1	0.713	0.596
bsh M03786_2.00	Drosophila melanogaster	TAATYTAATTA	TAATTARATTA	SELEX Nitta et al.(2015) bsh_1	0.713	0.596
bsh M03787_2.00	Drosophila melanogaster	TAATTRVWTAATKR	YMATTAWBYAATTA	SELEX Nitta et al.(2015) bsh_2	0.713	0.596
bsh M03788_2.00	Drosophila melanogaster	NTAATBRN	NYVATTAN	SELEX Nitta et al.(2015) bsh_3	0.713	0.596
BSX M05377_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_1	0.713	0.596
BSX M05378_2.00	Homo sapiens	BTAATBRV	BYVATTAV	SELEX Yin et al.(2017) BSX_eDBD_HT-SELEX_2	0.713	0.596
bsh M06483_2.00	Drosophila melanogaster	YTAATBR	YVATTAR	B1H Mathelier et al.(2014) MA0214.1	0.713	0.596
bsh M06231_2.00	Drosophila melanogaster	HYTAATBRV	BYVATTARD	B1H Zhu et al.(2011) Bsh_Cell_FBgn0000529	0.713	0.596
bsh M06232_2.00	Drosophila melanogaster	NTAATKR	YMATTAN	B1H Zhu et al.(2011) Bsh_SOLEXA_FBgn0000529	0.713	0.596
BSX M05379_2.00	Homo sapiens	NTAAYGHB	VDCRTTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_1	0.713	0.596
BSX M05380_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) BSX_eDBD_Methyl-HT-SELEX_2	0.713	0.596
lab M03797_2.00	Drosophila melanogaster	NTAATTAS	STAATTAN	SELEX Nitta et al.(2015) lab_1	0.709	0.614
lab M06493_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0230.1	0.709	0.614
lab M06260_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Zhu et al.(2011) Lab_Cell_FBgn0002522	0.709	0.614
lab M06261_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Lab_SOLEXA_FBgn0002522	0.709	0.614
NEMVEDRAFT_v1g8907 M02154_2.00	Nematostella vectensis	NTAATDRNNN	NNNYHATTAN	PBM Weirauch et al.(2014) pTH6483	0.708	0.579
ventx1.1.L M02234_2.00	Xenopus laevis	NNNNVBNNNN	NNNNVBNNNN	PBM Weirauch et al.(2014) pTH6162	0.704	0.561
VENTX M02091_2.00	Homo sapiens	TTAATTAB	VTAATTAA	PBM Weirauch et al.(2014) pTH5490	0.698	0.526
VENTX M00305_2.00	Homo sapiens	DTAATTRR	YYAATTAH	PBM Barrera et al.(2016) VENTX_REF	0.698	0.526
VENTX M03169_2.00	Homo sapiens	YTAATBGNT	ANCVATTAR	SELEX Jolma et al.(2013) VENTX_1	0.698	0.526
VENTX M03170_2.00	Homo sapiens	VSYTAATSGRWAAMCGATTAG	CTAATCGKTTWYCSATTARSB	SELEX Jolma et al.(2013) VENTX_2	0.698	0.526
VENTX M05188_2.00	Homo sapiens	CGHTAATBG	CVATTADCG	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_1	0.698	0.526
VENTX M05189_2.00	Homo sapiens	VNTAATBRNN	NNYVATTANB	SELEX Yin et al.(2017) VENTX_FL_HT-SELEX_2	0.698	0.526
VENTX M00303_2.00	Homo sapiens	NVTAATTANNN	NNNTAATTABN	PBM Barrera et al.(2016) VENTX_E101K	0.698	0.526
VENTX M05190_2.00	Homo sapiens	VHTAATKRNN	NNYMATTADB	SELEX Yin et al.(2017) VENTX_FL_Methyl-HT-SELEX	0.698	0.526
VENTX M00304_2.00	Homo sapiens	NATAYATAB	VTATRTATN	PBM Barrera et al.(2016) VENTX_R143C	0.698	0.509
HOXC4 M00329_2.00	Homo sapiens	NTAATKRNN	NNYMATTAN	PBM Barrera et al.(2016) HOXC4_R158L	0.695	0.632
Hoxd1 M00492_2.00	Mus musculus	NRATNDNN	NNHNATYN	PBM Berger et al.(2008) Hoxd1_3448	0.694	0.596
HOXD1 M05098_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_HT-SELEX	0.694	0.596
Hoxd1 M10768_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD1_03	0.694	0.596
HOXD1 M05099_2.00	Homo sapiens	BTAATKAV	BTMATTAV	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_1	0.694	0.596
HOXD1 M05100_2.00	Homo sapiens	NTWAYGAB	VTCRTWAN	SELEX Yin et al.(2017) HOXD1_eDBD_Methyl-HT-SELEX_2	0.694	0.596
MSX2 M00290_2.00	Homo sapiens	WDATNDNN	NNHNATHW	PBM Barrera et al.(2016) MSX2_REF	0.690	0.632
Msx2 M00414_2.00	Mus musculus	HRATKRNN	NNYMATYD	PBM Berger et al.(2008) Msx2_3449	0.690	0.632
Msx3 M00429_2.00	Mus musculus	TAATKDNN	NNHMATTA	PBM Berger et al.(2008) Msx3_3206	0.690	0.632
Msx1 M00501_2.00	Mus musculus	NHDATND	HNATHDN	PBM Berger et al.(2008) Msx1_3031	0.690	0.632
MSX1 M03184_2.00	Homo sapiens	TAATTRBHHNHTAATTRN	NYAATTADNDDVYAATTA	SELEX Jolma et al.(2013) MSX1_1	0.690	0.632
MSX1 M03185_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_2	0.690	0.632
MSX1 M03186_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) MSX1_3	0.690	0.632
MSX2 M03127_2.00	Homo sapiens	TAATTRBHWKWTAATTGV	BCAATTAWMWDVYAATTA	SELEX Jolma et al.(2013) MSX2_1	0.690	0.632
MSX2 M03128_2.00	Homo sapiens	NTAATTGB	VCAATTAN	SELEX Jolma et al.(2013) MSX2_2	0.690	0.632
Msx3 M03255_2.00	Mus musculus	TAATTGSHHNNTAATTRN	NYAATTANNDDSCAATTA	SELEX Jolma et al.(2013) Msx3_1	0.690	0.632
Msx3 M03256_2.00	Mus musculus	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) Msx3_2	0.690	0.632
MSX1 M05221_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_HT-SELEX	0.690	0.632
MSX1 M05224_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_HT-SELEX	0.690	0.632
MSX2 M05060_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_HT-SELEX	0.690	0.632
MSX1 M10715_2.00	Homo sapiens	HNBTWWNTG	CANWWAVND	Transfac Matys et al.(2006) V$MSX1_01	0.690	0.632
MSX1 M10716_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5_01	0.690	0.632
MSX1 M10717_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX1_Q5	0.690	0.632
MSX2 M10677_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q3	0.690	0.632
MSX2 M10678_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MSX2_Q6	0.690	0.632
MSX2 M00288_2.00	Homo sapiens	NTAATNDN	NHNATTAN	PBM Barrera et al.(2016) MSX2_P148H	0.690	0.632
MSX1 M05222_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_1	0.690	0.632
MSX1 M05223_2.00	Homo sapiens	NTWAYGMB	VKCRTWAN	SELEX Yin et al.(2017) MSX1_eDBD_Methyl-HT-SELEX_2	0.690	0.632
MSX1 M05225_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_1	0.690	0.632
MSX1 M05226_2.00	Homo sapiens	NTWAYGWB	VWCRTWAN	SELEX Yin et al.(2017) MSX1_FL_Methyl-HT-SELEX_2	0.690	0.632
MSX2 M05061_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_1	0.690	0.632
MSX2 M05062_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) MSX2_eDBD_Methyl-HT-SELEX_2	0.690	0.632
ESX1 M00292_2.00	Homo sapiens	NNTAATNDN	NHNATTANN	PBM Barrera et al.(2016) ESX1_REF	0.687	0.526
ESX1 M03137_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_1	0.687	0.526
ESX1 M03138_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) ESX1_2	0.687	0.526
ESX1 M05087_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_HT-SELEX	0.687	0.526
ESX1 M05089_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) ESX1_FL_HT-SELEX	0.687	0.526
ESX1 M05088_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_eDBD_Methyl-HT-SELEX	0.687	0.526
ESX1 M05090_2.00	Homo sapiens	NTAATTRR	YYAATTAN	SELEX Yin et al.(2017) ESX1_FL_Methyl-HT-SELEX	0.687	0.526
E5 M03814_2.00	Drosophila melanogaster	STAATKNN	NNMATTAS	SELEX Nitta et al.(2015) E5_1	0.686	0.561
E5 M06507_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0189.1	0.686	0.561
E5 M06293_2.00	Drosophila melanogaster	NBTAATKA	TMATTAVN	B1H Zhu et al.(2011) E5_Cell_FBgn0008646	0.686	0.561
E5 M06294_2.00	Drosophila melanogaster	NTAATDR	YHATTAN	B1H Zhu et al.(2011) E5_SOLEXA_FBgn0008646	0.686	0.561
Dr M00555_2.00	Drosophila melanogaster	TAATTRNN	NNYAATTA	PBM Busser et al.(2012a) Msh	0.685	0.649
Dr M06482_2.00	Drosophila melanogaster	TAATTGS	SCAATTA	B1H Mathelier et al.(2014) MA0188.1	0.685	0.649
Dr M06229_2.00	Drosophila melanogaster	TAATTGSHB	VDSCAATTA	B1H Zhu et al.(2011) Dr_Cell_FBgn0000492	0.685	0.649
Dr M06230_2.00	Drosophila melanogaster	TAATTR	YAATTA	B1H Zhu et al.(2011) Dr_SOLEXA_FBgn0000492	0.685	0.649
Gsx2 M00469_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Gsh2_3990	0.684	0.667
GSX1 M03205_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX1_1	0.684	0.667
GSX2 M03227_2.00	Homo sapiens	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) GSX2_1	0.684	0.667
GSX1 M05271_2.00	Homo sapiens	NYMATNRN	NYNATKRN	SELEX Yin et al.(2017) GSX1_eDBD_HT-SELEX	0.684	0.667
GSX2 M05329_2.00	Homo sapiens	HTAATKRS	SYMATTAD	SELEX Yin et al.(2017) GSX2_eDBD_HT-SELEX	0.684	0.667
ind M06527_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0228.1	0.684	0.667
ind M06329_2.00	Drosophila melanogaster	YVYTAATKA	TMATTARBR	B1H Zhu et al.(2011) Ind_Cell_FBgn0025776	0.684	0.667
GSX1 M05272_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) GSX1_eDBD_Methyl-HT-SELEX	0.684	0.667
GSX2 M05330_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) GSX2_eDBD_Methyl-HT-SELEX	0.684	0.667
MSX2 M00289_2.00	Homo sapiens	WDATWDNN	NNHWATHW	PBM Barrera et al.(2016) MSX2_R172H	0.682	0.614
Q24780_9CNID M02205_2.00	Eleutheria dichotoma	NNYTAATTAMN	NKTAATTARNN	PBM Weirauch et al.(2014) pTH6308	0.677	0.491
ro M06495_2.00	Drosophila melanogaster	YTAATTA	TAATTAR	B1H Mathelier et al.(2014) MA0241.1	0.676	0.596
ro M06264_2.00	Drosophila melanogaster	NYTAATTA	TAATTARN	B1H Zhu et al.(2011) Ro_Cell_FBgn0003267	0.676	0.596
ro M06265_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Ro_SOLEXA_FBgn0003267	0.676	0.596
lms M03863_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) CG13424_1	0.675	0.596
lms M03864_2.00	Drosophila melanogaster	HTWATTRDWTDATTRR	YYAATHAWHYAATWAD	SELEX Nitta et al.(2015) lms_1	0.675	0.596
lms M06536_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Mathelier et al.(2014) MA0175.1	0.675	0.596
lms M06347_2.00	Drosophila melanogaster	NYTAATKR	YMATTARN	B1H Zhu et al.(2011) CG13424_Cell_FBgn0034520	0.675	0.596
lms M06348_2.00	Drosophila melanogaster	NNHTAATDRN	NYHATTADNN	B1H Zhu et al.(2011) CG13424_SOLEXA_2_FBgn0034520	0.675	0.596
lms M06349_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) CG13424_SOLEXA_FBgn0034520	0.675	0.596
EMX1 M02088_2.00	Homo sapiens	NNTAATKANN	NNTMATTANN	PBM Weirauch et al.(2014) pTH5677	0.675	0.561
ems M02114_2.00	Drosophila melanogaster	NTAATKRNB	VNYMATTAN	PBM Weirauch et al.(2014) pTH5673	0.675	0.561
EMX1 M03151_2.00	Homo sapiens	NBTAATTRNN	NNYAATTAVN	SELEX Jolma et al.(2013) EMX1_1	0.675	0.561
EMX1 M03152_2.00	Homo sapiens	YMATTARYTAATKR	YMATTARYTAATKR	SELEX Jolma et al.(2013) EMX1_2	0.675	0.561
ems M03789_2.00	Drosophila melanogaster	BTAATTAN	NTAATTAV	SELEX Nitta et al.(2015) ems_1	0.675	0.561
ems M03790_2.00	Drosophila melanogaster	BTAATTAVBVBTAATKRN	NYMATTAVBVBTAATTAV	SELEX Nitta et al.(2015) ems_2	0.675	0.561
ems M03791_2.00	Drosophila melanogaster	BTAATKRN	NYMATTAV	SELEX Nitta et al.(2015) ems_3	0.675	0.561
ems M03792_2.00	Drosophila melanogaster	STAATKRSSSSTAATKRV	BYMATTASSSSYMATTAS	SELEX Nitta et al.(2015) ems_4	0.675	0.561
EMX1 M05145_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_HT-SELEX	0.675	0.561
EMX1 M05147_2.00	Homo sapiens	BTAATTAV	BTAATTAV	SELEX Yin et al.(2017) EMX1_FL_HT-SELEX	0.675	0.561
ems M06484_2.00	Drosophila melanogaster	HTAATKR	YMATTAD	B1H Mathelier et al.(2014) MA0219.1	0.675	0.561
ems M06233_2.00	Drosophila melanogaster	WHTAATKR	YMATTADW	B1H Zhu et al.(2011) Ems_Cell_FBgn0000576	0.675	0.561
ems M06234_2.00	Drosophila melanogaster	TSTMATHM	KDATKASA	B1H Zhu et al.(2011) ems_FlyReg_FBgn0000576	0.675	0.561
ems M06235_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Zhu et al.(2011) Ems_SOLEXA_FBgn0000576	0.675	0.561
ems M09676_2.00	Drosophila melanogaster	WTWATGA	TCATWAW	Misc Kulakovskiy et al.(2009) ems	0.675	0.561
EMX1 M05146_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Yin et al.(2017) EMX1_eDBD_Methyl-HT-SELEX	0.675	0.561
EMX1 M05148_2.00	Homo sapiens	BTAATTAN	NTAATTAV	SELEX Yin et al.(2017) EMX1_FL_Methyl-HT-SELEX	0.675	0.561
Emx2 M00495_2.00	Mus musculus	NTAATDDNN	NNHHATTAN	PBM Berger et al.(2008) Emx2_3420	0.675	0.544
EMX2 M03210_2.00	Homo sapiens	NBTAATTANN	NNTAATTAVN	SELEX Jolma et al.(2013) EMX2_1	0.675	0.544
EMX2 M03211_2.00	Homo sapiens	YMATTARBTAATKR	YMATTAVYTAATKR	SELEX Jolma et al.(2013) EMX2_2	0.675	0.544
EMX2 M05281_2.00	Homo sapiens	YTAATKAB	VTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_HT-SELEX	0.675	0.544
EMX2 M05282_2.00	Homo sapiens	YTAATKAN	NTMATTAR	SELEX Yin et al.(2017) EMX2_eDBD_Methyl-HT-SELEX	0.675	0.544
NANOG M05015_2.00	Homo sapiens	NYRABBVB	VBVVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_HT-SELEX	0.672	0.491
NANOG M09139_2.00	Homo sapiens	NTYWRCATNWSAAWRVN	NBYWTTSWNATGYWRAN	Misc Kulakovskiy et al.(2013) NANOG_HUMAN.H11MO.0.A	0.672	0.491
NANOG M10664_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_01	0.672	0.491
NANOG M10665_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_02	0.672	0.491
NANOG M10666_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_05	0.672	0.491
NANOG M10667_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_07	0.672	0.491
NANOG M10668_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q3	0.672	0.491
NANOG M10669_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$NANOG_Q6	0.672	0.491
NANOG M05016_2.00	Homo sapiens	NHAAYGH	DCRTTDN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_1	0.672	0.491
NANOG M05017_2.00	Homo sapiens	NYRABKRN	NYMVTYRN	SELEX Yin et al.(2017) NANOG_eDBD_Methyl-HT-SELEX_2	0.672	0.491
en M03793_2.00	Drosophila melanogaster	NTAATTRN	NYAATTAN	SELEX Nitta et al.(2015) en_1	0.669	0.509
en M06485_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0220.1	0.669	0.509
en M06236_2.00	Drosophila melanogaster	NYTAATTR	YAATTARN	B1H Zhu et al.(2011) En_Cell_FBgn0000577	0.669	0.509
en M06237_2.00	Drosophila melanogaster	DBTAATKR	YMATTAVH	B1H Zhu et al.(2011) en_FlyReg_FBgn0000577	0.669	0.509
en M06238_2.00	Drosophila melanogaster	NNNTAATTRN	NYAATTANNN	B1H Zhu et al.(2011) en_SOLEXA_2_FBgn0000577	0.669	0.509
en M06239_2.00	Drosophila melanogaster	NTAATTR	YAATTAN	B1H Zhu et al.(2011) En_SOLEXA_FBgn0000577	0.669	0.509
en M09677_2.00	Drosophila melanogaster	HTAATTRN	NYAATTAD	Misc Kulakovskiy et al.(2009) en	0.669	0.509
en M10785_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$EN_Q6	0.669	0.509
Nanog M02098_2.00	Mus musculus	NHDAYNDNN	NNHNRTHDN	PBM Weirauch et al.(2014) pTH5685	0.668	0.491
Nanog M09176_2.00	Mus musculus	HTYWRMAWNWSAAWRVV	BBYWTTSWNWTKYWRAD	Misc Kulakovskiy et al.(2013) NANOG_MOUSE.H11MO.0.A	0.668	0.491
Nanog M09565_2.00	Mus musculus	BYTRATKGSY	RSCMATYARV	Misc Heinz et al.(2010) mES-Nanog_GSE11724	0.668	0.491
Rax M00426_2.00	Mus musculus	NNTAATTRN	NYAATTANN	PBM Berger et al.(2008) Rax_3443	0.668	0.491
RAX M03149_2.00	Homo sapiens	NHTAATTRNN	NNYAATTADN	SELEX Jolma et al.(2013) RAX_1	0.668	0.491
Rx M03840_2.00	Drosophila melanogaster	BTAATTRV	BYAATTAV	SELEX Nitta et al.(2015) Rx_1	0.668	0.491
Rx M03841_2.00	Drosophila melanogaster	NTAATBNSATTAN	NTAATSNVATTAN	SELEX Nitta et al.(2015) Rx_2	0.668	0.491
RAX M05142_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_HT-SELEX	0.668	0.491
Rx M06520_2.00	Drosophila melanogaster	YTAATTR	YAATTAR	B1H Mathelier et al.(2014) MA0202.1	0.668	0.491
Rx M06317_2.00	Drosophila melanogaster	VYTAATTR	YAATTARB	B1H Zhu et al.(2011) Rx_Cell_FBgn0020617	0.668	0.491
Rx M06318_2.00	Drosophila melanogaster	HTAATTR	YAATTAD	B1H Zhu et al.(2011) Rx_SOLEXA_FBgn0020617	0.668	0.491
Rax M10773_2.00	Rattus norvegicus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$RAX_04	0.668	0.491
RAX M05143_2.00	Homo sapiens	NTAAYRNN	NNYRTTAN	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_1	0.668	0.491
RAX M05144_2.00	Homo sapiens	YYAATTRN	NYAATTRR	SELEX Yin et al.(2017) RAX_eDBD_Methyl-HT-SELEX_2	0.668	0.491
RAX2 M03214_2.00	Homo sapiens	NTAATTRN	NYAATTAN	SELEX Jolma et al.(2013) RAXL1_1	0.668	0.474
En2 M00484_2.00	Mus musculus	NNYHATHN	NDATDRNN	PBM Berger et al.(2008) En2_0952	0.667	0.509
EN2 M03189_2.00	Homo sapiens	NNTAATTRNN	NNYAATTANN	SELEX Jolma et al.(2013) EN2_1	0.667	0.509
EN2 M03190_2.00	Homo sapiens	VBTAATTRNN	NNYAATTAVB	SELEX Jolma et al.(2013) EN2_2	0.667	0.509
En2 M03276_2.00	Mus musculus	VBTAATTASN	NSTAATTAVB	SELEX Jolma et al.(2013) En2_1	0.667	0.509
EN2 M05237_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_HT-SELEX	0.667	0.509
EN2 M05238_2.00	Homo sapiens	VHTDAYGHB	VDCRTHADB	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_1	0.667	0.509
EN2 M05239_2.00	Homo sapiens	BTAATTRV	BYAATTAV	SELEX Yin et al.(2017) EN2_eDBD_Methyl-HT-SELEX_2	0.667	0.509
En1 M00519_2.00	Mus musculus	HNWTNNN	NNNAWND	PBM Berger et al.(2008) En1_3123	0.667	0.491
EN1 M03180_2.00	Homo sapiens	NNTAATTRVB	VBYAATTANN	SELEX Jolma et al.(2013) EN1_1	0.667	0.491
EN1 M03181_2.00	Homo sapiens	TAATTRSNYAATTA	TAATTRNSYAATTA	SELEX Jolma et al.(2013) EN1_2	0.667	0.491
EN1 M03182_2.00	Homo sapiens	BTAATTRN	NYAATTAV	SELEX Jolma et al.(2013) EN1_3	0.667	0.491
EN1 M03183_2.00	Homo sapiens	TDAKKRSNYMATTA	TAATKRNSYMMTHA	SELEX Jolma et al.(2013) EN1_4	0.667	0.491
EN1 M05218_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_HT-SELEX	0.667	0.491
EN1 M05871_2.00	Homo sapiens	VNYAATTA	TAATTRNB	SMiLE-seq Isakova et al.(2017) EN1	0.667	0.491
EN1 M10714_2.00	Homo sapiens	RTDDTBB	VVAHHAY	Transfac Matys et al.(2006) V$EN1_01	0.667	0.491
EN1 M05219_2.00	Homo sapiens	NTAAYGAB	VTCRTTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_1	0.667	0.491
EN1 M05220_2.00	Homo sapiens	NTAATTRV	BYAATTAN	SELEX Yin et al.(2017) EN1_eDBD_Methyl-HT-SELEX_2	0.667	0.491
inv M06491_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Mathelier et al.(2014) MA0229.1	0.665	0.474
inv M06255_2.00	Drosophila melanogaster	DYTAATTR	YAATTARH	B1H Zhu et al.(2011) Inv_Cell_FBgn0001269	0.665	0.474
inv M06256_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_2_FBgn0001269	0.665	0.474
inv M06257_2.00	Drosophila melanogaster	NHTAATTRV	BYAATTADN	B1H Zhu et al.(2011) inv_SOLEXA_5_FBgn0001269	0.665	0.474
Mixl1 M10765_2.00	Mus musculus	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$MIXL1_03	0.661	0.439
B-H1 M03829_2.00	Drosophila melanogaster	VNTAAWYGNN	NNCRWTTANB	SELEX Nitta et al.(2015) B-H1_1	0.658	0.596
B-H1 M03830_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H1_2	0.658	0.596
B-H2 M03810_2.00	Drosophila melanogaster	VNTAAAYGNH	DNCRTTTANB	SELEX Nitta et al.(2015) B-H2_1	0.658	0.596
B-H2 M03811_2.00	Drosophila melanogaster	SNTAADBGN	NCVHTTANS	SELEX Nitta et al.(2015) B-H2_2	0.658	0.596
B-H2 M06503_2.00	Drosophila melanogaster	WTAATTG	CAATTAW	B1H Mathelier et al.(2014) MA0169.1	0.658	0.596
B-H1 M06512_2.00	Drosophila melanogaster	HTAAWYG	CRWTTAD	B1H Mathelier et al.(2014) MA0168.1	0.658	0.596
Barhl1 M00433_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl1_2590	0.658	0.579
ENSTNIG00000006040 M02106_2.00	Tetraodon nigroviridis	NNNBTAAWHRBNN	NNVYDWTTAVNNN	PBM Weirauch et al.(2014) pTH6503	0.658	0.579
Barhl1 M03258_2.00	Mus musculus	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) Barhl1_1	0.658	0.579
Barhl1 M03259_2.00	Mus musculus	NNTAADNRNN	NNYNHTTANN	SELEX Jolma et al.(2013) Barhl1_2	0.658	0.579
Barhl1 M03260_2.00	Mus musculus	TAAWYGNYNNTAAWYG	CRWTTANNRNCRWTTA	SELEX Jolma et al.(2013) Barhl1_3	0.658	0.579
BARHL1 M05091_2.00	Homo sapiens	NTAAWYGN	NCRWTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_1	0.658	0.579
BARHL1 M05092_2.00	Homo sapiens	NTAADBGN	NCVHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_HT-SELEX_2	0.658	0.579
BARHL1 M05093_2.00	Homo sapiens	NTAADKGN	NCMHTTAN	SELEX Yin et al.(2017) BARHL1_eDBD_Methyl-HT-SELEX	0.658	0.579
Barhl2 M00460_2.00	Mus musculus	NTAAWNRNN	NNYNWTTAN	PBM Berger et al.(2008) Barhl2_3868	0.658	0.544
BARHL2 M03157_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_1	0.658	0.544
BARHL2 M03158_2.00	Homo sapiens	NNTAAWBGNN	NNCVWTTANN	SELEX Jolma et al.(2013) BARHL2_2	0.658	0.544
BARHL2 M03159_2.00	Homo sapiens	TAAWYGNNNNTAAWYR	YRWTTANNNNCRWTTA	SELEX Jolma et al.(2013) BARHL2_3	0.658	0.544
BARHL2 M03160_2.00	Homo sapiens	NNTAAWYGNH	DNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_4	0.658	0.544
BARHL2 M03161_2.00	Homo sapiens	NNTAAWYGNN	NNCRWTTANN	SELEX Jolma et al.(2013) BARHL2_5	0.658	0.544
BARHL2 M03162_2.00	Homo sapiens	TAAWYGNYNHTAAWYG	CRWTTADNRNCRWTTA	SELEX Jolma et al.(2013) BARHL2_6	0.658	0.544
BARHL2 M05164_2.00	Homo sapiens	HTAAAYGNY	RNCRTTTAD	SELEX Yin et al.(2017) BARHL2_eDBD_HT-SELEX_1	0.658	0.544
BARHL2 M05165_2.00	Homo sapiens	NTAAWTGNB

exex (Drosophila melanogaster) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

exex **(Drosophila melanogaster)
Homeodomain**