CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA13G00310
(
Glycine max
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
GLYMA13G00310
T218855_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAT1
M02047_2.00
Arabidopsis thaliana
NMATGATTRN
NYAATCATKN
PBM
Weirauch et al.(2014)
pTH8107
0.822
0.754
HAT1
M06922_2.00
Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT1_col_a
0.822
0.754
HAT1
M06923_2.00
Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN
Dap-seq
OMalley et al.(2016)
HAT1_colamp_a
0.822
0.754
HAT22
M06926_2.00
Arabidopsis thaliana
NNYAATCATT
AATGATTRNN
Dap-seq
OMalley et al.(2016)
HAT22_col_a
0.809
0.789
HAT2
M06929_2.00
Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN
Dap-seq
OMalley et al.(2016)
HAT2_colamp_a
0.792
0.754
HAT2
M06930_2.00
Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW
Dap-seq
OMalley et al.(2016)
HAT2_col_v31
0.792
0.754
HAT3
M00728_2.00
Arabidopsis thaliana
DTGATTRV
BYAATCAH
PBM
Chang et al.(2013)
pTH7400
0.784
0.807
ATHB-X
M06902_2.00
Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD
Dap-seq
OMalley et al.(2016)
ATHB18_col_a
0.778
0.684
ATHB-X
M06903_2.00
Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN
Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a
0.778
0.684
ATHB-4
M01065_2.00
Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN
PBM
Sullivan et al.(2014)
pTH8184
0.764
0.772
ATHB-4
M02042_2.00
Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN
PBM
Weirauch et al.(2014)
pTH8667
0.764
0.772
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA13G00310.1
Homeodomain
91
147
CRKKLRLSKEQSSMLENSFKQHSTLNPVQKQALADQLNLKTRQVEVWFQNRRARTKL
Links
Other
Homeodomain
family TFs
Other
Glycine max
TFs
693 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AOL_s00097g585
Arthrobotrys oligospora
AOL_s00097g585
I
fgeneshMC_pg.5_#_674
Mucor circinelloides
fgeneshMC_pg.5_#_674
I
fgeneshMC_pg.1_#_1636
Mucor circinelloides
fgeneshMC_pg.1_#_1636
I
H072_2778
Dactylellina haptotyla
H072_2778
I
sr16828
Sporisorium reilianum
sr16828
N
PAXINDRAFT_41693
Paxillus involutus
PAXINDRAFT_41693
N
PAXRUDRAFT_536199
Paxillus rubicundulus
PAXRUDRAFT_536199
N
PGTG_14882
Puccinia graminis
PGTG_14882
N
PHACADRAFT_253478
Phanerochaete carnosa
PHACADRAFT_253478
N
PHLGIDRAFT_33148
Phlebiopsis gigantea
PHLGIDRAFT_33148
N
PHSY_004982
Pseudozyma hubeiensis
PHSY_004982
N
PIIN_03450
Piriformospora indica
PIIN_03450
N
PILCRDRAFT_816838
Piloderma croceum
PILCRDRAFT_816838
N
PISMIDRAFT_21810
Pisolithus microcarpus
PISMIDRAFT_21810
N
PTTG_06755
Puccinia triticina
PTTG_06755
N
SCLCIDRAFT_1207899
Scleroderma citrinum
SCLCIDRAFT_1207899
N
SERLA73DRAFT_190971
Serpula lacrymans
SERLA73DRAFT_190971
N
Moror_12097
Moniliophthora roreri
Moror_12097
N
UHOR_08919
Ustilago hordei
UHOR_08919
N
UM06385
Ustilago maydis
UM06385
N
V565_084030
Rhizoctonia solani
V565_084030
N
WALSEDRAFT_59486
Wallemia sebi
WALSEDRAFT_59486
N
estExt_fgeneshMC_kg.C_70068
Mucor circinelloides
estExt_fgeneshMC_kg.C_70068
N
fgenesh1_pg.C_scaffold_5000487
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_5000487
N
fgeneshPB_pg.28__99
Phycomyces blakesleeanus
fgeneshPB_pg.28__99
N
EDP42441.1
Malassezia globosa
EDP42441.1
N
estExt_fgenesh2_pm.C_100040
Heterobasidion annosum
estExt_fgenesh2_pm.C_100040
N
GLOTRDRAFT_139856
Gloeophyllum trabeum
GLOTRDRAFT_139856
N
A1Q1_00804
Trichosporon asahii
A1Q1_00804
N
AGABI2DRAFT_187161
Agaricus bisporus
AGABI2DRAFT_187161
N
BAUCODRAFT_276951
Baudoinia compniacensis
BAUCODRAFT_276951
N
BN946_scf184845.g7
Trametes cinnabarina
BN946_scf184845.g7
N
CC1G_05468
Coprinopsis cinerea
CC1G_05468
N
CERSUDRAFT_116811
Ceriporiopsis subvermispora
CERSUDRAFT_116811
N
CNJ00670
Cryptococcus neoformans
CNJ00670
N
CY34DRAFT_89052
Suillus luteus
CY34DRAFT_89052
N
DICSQDRAFT_157861
Dichomitus squalens
DICSQDRAFT_157861
N
E5Q_04000
Mixia osmundae
E5Q_04000
N
FOMPIDRAFT_73073
Fomitopsis pinicola
FOMPIDRAFT_73073
N
GALMADRAFT_139439
Galerina marginata
GALMADRAFT_139439
N
PaG_04268
Pseudozyma aphidis
PaG_04268
N
HYDPIDRAFT_176127
Hydnomerulius pinastri
HYDPIDRAFT_176127
N
J056_002242
Wallemia ichthyophaga
J056_002242
N
JAAARDRAFT_32353
Jaapia argillacea
JAAARDRAFT_32353
N
K437DRAFT_169880
Tilletiaria anomala
K437DRAFT_169880
N
K443DRAFT_109004
Laccaria amethystina
K443DRAFT_109004
N
L804_00066
Cryptococcus gattii
L804_00066
N
M378DRAFT_24342
Amanita muscaria
M378DRAFT_24342
N
M404DRAFT_131737
Pisolithus tinctorius
M404DRAFT_131737
N
M407DRAFT_17372
Tulasnella calospora
M407DRAFT_17372
N
M408DRAFT_18944
Serendipita vermifera
M408DRAFT_18944
N
RO3G_03650
Rhizopus oryzae
RO3G_03650
N