GLYMA13G00310 (Glycine max)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 GLYMA13G00310 T218855_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.822 0.754
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.822 0.754
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.822 0.754
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.809 0.789
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.792 0.754
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.792 0.754
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.784 0.807
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.778 0.684
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.778 0.684
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.764 0.772
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.764 0.772
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G00310.1 Homeodomain 91 147

Links

Other Homeodomain family TFs
Other Glycine max TFs

693 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSP00000240050-D1 Bos grunniens ENSP00000240050-D1 N
MTERF2 Bos taurus ENSBTAG00000010144 N
MTERF2 Cavia porcellus ENSCPOG00000006958 N
Mterf2 Dipodomys ordii ENSDORG00000004167 N
MTERF2 Gorilla gorilla ENSGGOG00000025492 N
MTERF2 Homo sapiens ENSG00000120832 N
ENSSTOG00000010181 Ictidomys tridecemlineatus ENSSTOG00000010181 N
ENSMEUG00000013008 Macropus eugenii ENSMEUG00000013008 N
MTERF2 Monodelphis domestica ENSMODG00000001589 N
Mterf2 Mus musculus ENSMUSG00000049038 N
Myotis_brandtii_Cry1_10020414 Myotis brandtii Myotis_brandtii_Cry1_10020414 N
ENSNLEG00000006719 Nomascus leucogenys ENSNLEG00000006719 N
MTERF2 Ochotona princeps ENSOPRG00000008669 N
MTERF2 Pan troglodytes ENSPTRG00000005395 N
ENSPPYG00000004910 Pongo abelii ENSPPYG00000004910 N
MTERF2 Procavia capensis ENSPCAG00000008234 N
Mterf2 Rattus norvegicus ENSRNOG00000006978 N
ENSTSYG00000010530 Tarsius syrichta ENSTSYG00000010530 N
MTERF2 Tursiops truncatus ENSTTRG00000012809 N
MTERF2 Vicugna pacos ENSVPAG00000008539 N