CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLTH0H05236g
(
Lachancea thermotolerans
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
KLTH0H05236g
T219897_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CUP9
M00059_2.00
Saccharomyces cerevisiae
TGACABHW
WDVTGTCA
PBM
Badis et al.(2008)
CUP9_4508
0.640
0.782
CUP9
M01553_2.00
Saccharomyces cerevisiae
NWGACAYWWH
DWWRTGTCWN
PBM
Zhu et al.(2009)
Cup9
0.640
0.782
CUP9
M07488_2.00
Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0288.1
0.640
0.782
CUP9
M08576_2.00
Saccharomyces cerevisiae
TGACAYAWW
WWTRTGTCA
Misc
DeBoer et al.(2011)
YPL177C_480
0.640
0.782
CAGL0H02959g
M02060_2.00
Candida glabrata
NDTDACRBNN
NNVYGTHAHN
PBM
Weirauch et al.(2014)
pTH6455
0.640
0.745
TOS8
M02192_2.00
Saccharomyces cerevisiae
NNNTKACGTMW
WKACGTMANNN
PBM
Weirauch et al.(2014)
pTH5696
0.622
0.709
TOS8
M00057_2.00
Saccharomyces cerevisiae
NNNCRYGNNN
NNNCRYGNNN
PBM
Badis et al.(2008)
TOS8_2100
0.622
0.709
TOS8
M07486_2.00
Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0408.1
0.622
0.709
TOS8
M08574_2.00
Saccharomyces cerevisiae
NWTGACAB
VTGTCAWN
Misc
DeBoer et al.(2011)
YGL096W_494
0.622
0.709
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAR30245
Homeodomain
103
160
PPRRNNLPKETVEILNAWLASHLNNPYPSPQEKRELLVQTGLSKVQLSNWFINVRRRK
Links
Other
Homeodomain
family TFs
Other
Lachancea thermotolerans
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KLTH0H05236g
Kluyveromyces thermotolerans
KLTH0H05236g
I
0.867
Kwal_11092
Kluyveromyces waltii
Kwal_11092
I
0.682
CLUG_02322
Candida lusitaniae
CLUG_02322
N
0.671
CANTEDRAFT_114099
Candida tenuis
CANTEDRAFT_114099
N
0.671
CLUG_02322
Clavispora lusitaniae
CLUG_02322
N
0.671
DEHA2D03454g
Debaryomyces hansenii
DEHA2D03454g
N
0.671
GNLVRS01_PISO0I03704g
Millerozyma farinosa
GNLVRS01_PISO0I03704g
N
0.667
GNLVRS01_PISO0J05487g
Millerozyma farinosa
GNLVRS01_PISO0J05487g
N
0.667
CPAG_03922
Candida parapsilosis
CPAG_03922
N
0.659
CaO19.13867
Candida albicans
CaO19.13867
N
0.659
CaO19.6514
Candida albicans
CaO19.6514
N
0.659
CD36_71860
Candida dubliniensis
CD36_71860
N
0.659
CORT_0H01330
Candida orthopsilosis
CORT_0H01330
N
0.659
CTRG_05054
Candida tropicalis
CTRG_05054
N
0.659
G210_2394
Candida maltosa
G210_2394
N
0.659
LELG_05517
Lodderomyces elongisporus
LELG_05517
N
0.659
SPAPADRAFT_63770
Spathaspora passalidarum
SPAPADRAFT_63770
N
0.659
PICST_32431
Scheffersomyces stipitis
PICST_32431
N
0.655
fgenesh1_pg.C_chr_5.1000595
Pichia stipitis
fgenesh1_pg.C_chr_5.1000595
N
0.655
TDEL_0F01810
Torulaspora delbrueckii
TDEL_0F01810
I
0.646
ZBAI_04266
Zygosaccharomyces bailii
ZBAI_04266
I
0.646
ZBAI_07775
Zygosaccharomyces bailii
ZBAI_07775
I
0.646
ZYRO0G22044g
Zygosaccharomyces rouxii
ZYRO0G22044g
I
0.646
KNAG_0F02210
Kazachstania naganishii
KNAG_0F02210
I
0.645
KAFR_0A04370
Kazachstania africana
KAFR_0A04370
I
0.644
AACERI_AaceriAFL049C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL049C
I
0.641
AGOS_AFL049C
Ashbya gossypii
AGOS_AFL049C
I
0.641
CAGL0H02959g
Candida glabrata
CAGL0H02959g
D
0.640
SU7_3505
Saccharomyces arboricola
SU7_3505
I
0.640
CUP9
Saccharomyces cerevisiae
YPL177C
D
0.640
21608_YPL177C
Saccharomyces mikatae
21608_YPL177C
I
0.640
22207_YPL177C
Saccharomyces paradoxus
22207_YPL177C
I
0.640
24630_YPL177C
Saccharomyces bayanus
24630_YPL177C
I
0.640
Ecym_2247
Eremothecium cymbalariae
Ecym_2247
I
0.637
Kpol_1036p56
Vanderwaltozyma polyspora
Kpol_1036p56
I
0.637
TBLA_0C03740
Tetrapisispora blattae
TBLA_0C03740
I
0.637
TPHA_0B02580
Tetrapisispora phaffii
TPHA_0B02580
I
0.630
8079_YGL096W
Saccharomyces bayanus
8079_YGL096W
I
0.630
KNAG_0M00500
Kazachstania naganishii
KNAG_0M00500
I
0.628
NCAS_0H01130
Naumovozyma castellii
NCAS_0H01130
I
0.624
Scas_Contig597.15
Saccharomyces castellii
Scas_Contig597.15
I
0.624
NDAI_0I01320
Naumovozyma dairenensis
NDAI_0I01320
I
0.623
TOS8
Saccharomyces cerevisiae
YGL096W
D
0.622
7936_YGL096W
Saccharomyces mikatae
7936_YGL096W
I
0.622
8695_YGL096W
Saccharomyces paradoxus
8695_YGL096W
I
0.622
fgenesh1_pg.scaffold_2000153
Monosiga brevicollis
fgenesh1_pg.scaffold_2000153
N
0.620
SKUD_191904
Saccharomyces kudriavzevii
SKUD_191904
I
0.617
SAKL0A05610g
Lachancea kluyveri
SAKL0A05610g
I
0.617