OGLUM01G35890 (Oryza glumaepatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OGLUM01G35890 T221391_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.772 0.684
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.772 0.684
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.772 0.684
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.746 0.596
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.746 0.596
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.746 0.596
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.746 0.596
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.744 0.649
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.744 0.649
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.744 0.649
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.740 0.614
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.740 0.614
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.732 0.579
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.710 0.561
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.710 0.561
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM01G35890.1 Homeodomain 96 152

Links

Other Homeodomain family TFs
Other Oryza glumaepatula TFs

604 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI49658 Acyrthosiphon pisum ACYPI49658 N
AAEL009489 Aedes aegypti AAEL009489 N
AALB006756 Anopheles albimanus AALB006756 N
AATE020341 Anopheles atroparvus AATE020341 N
AGAP012976 Anopheles gambiae AGAP012976 N
AMEM015894 Anopheles merus AMEM015894 N
ASTEI10581 Anopheles stephensi ASTEI10581 N
GB41160 Apis mellifera GB41160 N
BGIBMGA000838 Bombyx mori BGIBMGA000838 N
Cflo_10754--XP_625198.2_APIME Camponotus floridanus Cflo_10754--XP_625198.2_APIME N
CpipJ_CPIJ007160 Culex pipiens CpipJ_CPIJ007160 N
CPIJ007160 Culex quinquefasciatus CPIJ007160 N
KGM_16747 Danaus plexippus KGM_16747 N
DAPPUDRAFT_9207 Daphnia pulex DAPPUDRAFT_9207 N
YQE_02546 Dendroctonus ponderosae YQE_02546 N
GF22092 Drosophila ananassae FBgn0099091 N
GG18672 Drosophila erecta FBgn0110882 N
GH17913 Drosophila grimshawi FBgn0125381 N
fd3F Drosophila melanogaster FBgn0264954 N
GI16052 Drosophila mojavensis FBgn0138801 N
GL26743 Drosophila persimilis FBgn0164324 N
GA23037 Drosophila pseudoobscura FBgn0244439 N
GM12307 Drosophila sechellia FBgn0167244 N
GM16234 Drosophila sechellia FBgn0171150 N
GD16653 Drosophila simulans FBgn0188244 N
GJ15628 Drosophila virilis FBgn0202818 N
GK25470 Drosophila willistoni FBgn0227429 N
HHAL005849-PA Halyomorpha halys HHAL005849-PA N
Hsal_01267--XP_625198.2_APIME Harpegnathos saltator Hsal_01267--XP_625198.2_APIME N
LDEC013315 Leptinotarsa decemlineata LDEC013315 N
MDOA010937 Musca domestica MDOA010937 N
NV15557 Nasonia vitripennis NV15557 N
PHUM122520 Pediculus humanus PHUM122520 N
SINV20829 Solenopsis invicta SINV20829 N
TC001232 Tribolium castaneum TC001232 N
L798_02825 Zootermopsis nevadensis L798_02825 N
L798_00307 Zootermopsis nevadensis L798_00307 N