OGLUM09G12570 (Oryza glumaepatula)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 OGLUM09G12570 T221459_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HAT22
M06926_2.00 		Arabidopsis thaliana
NNYAATCATT
AATGATTRNN		 Dap-seq
OMalley et al.(2016)
HAT22_col_a 		0.862 0.860
HAT2
M06929_2.00 		Arabidopsis thaliana
NHAATGATTRN
NYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT2_colamp_a 		0.798 0.877
HAT2
M06930_2.00 		Arabidopsis thaliana
WNYAATCATWD
HWATGATTRNW		 Dap-seq
OMalley et al.(2016)
HAT2_col_v31 		0.798 0.877
HAT1
M02047_2.00 		Arabidopsis thaliana
NMATGATTRN
NYAATCATKN		 PBM
Weirauch et al.(2014)
pTH8107 		0.796 0.825
HAT1
M06922_2.00 		Arabidopsis thaliana
NHAATGATTRNNWDW
WHWNNYAATCATTDN		 Dap-seq
OMalley et al.(2016)
HAT1_col_a 		0.796 0.825
HAT1
M06923_2.00 		Arabidopsis thaliana
NYAATCATTDN
NHAATGATTRN		 Dap-seq
OMalley et al.(2016)
HAT1_colamp_a 		0.796 0.825
ATHB-X
M06902_2.00 		Arabidopsis thaliana
HHAATRATTRN
NYAATYATTDD		 Dap-seq
OMalley et al.(2016)
ATHB18_col_a 		0.773 0.702
ATHB-X
M06903_2.00 		Arabidopsis thaliana
NYAATGATTRV
BYAATCATTRN		 Dap-seq
OMalley et al.(2016)
ATHB18_colamp_a 		0.773 0.702
ATHB-4
M01065_2.00 		Arabidopsis thaliana
NBMTGCATRNN
NNYATGCAKVN		 PBM
Sullivan et al.(2014)
pTH8184 		0.768 0.877
ATHB-4
M02042_2.00 		Arabidopsis thaliana
NNWTNATTRN
NYAATNAWNN		 PBM
Weirauch et al.(2014)
pTH8667 		0.768 0.877
HAT3
M00728_2.00 		Arabidopsis thaliana
DTGATTRV
BYAATCAH		 PBM
Chang et al.(2013)
pTH7400 		0.768 0.877
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OGLUM09G12570.1 Homeodomain 179 235

Links

Other Homeodomain family TFs
Other Oryza glumaepatula TFs

696 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TDEL_0F01950 Torulaspora delbrueckii TDEL_0F01950 N
SAKL0A03740g Lachancea kluyveri SAKL0A03740g N
18919_YMR172W Saccharomyces bayanus 18919_YMR172W N
17051_YMR172W Saccharomyces mikatae 17051_YMR172W N
16644_YMR172W Saccharomyces paradoxus 16644_YMR172W N
Scas_Contig720.42 Saccharomyces castellii Scas_Contig720.42 N
ZYRO0E07502g Zygosaccharomyces rouxii ZYRO0E07502g N
ZBAI_06661 Zygosaccharomyces bailii ZBAI_06661 N
ZBAI_04621 Zygosaccharomyces bailii ZBAI_04621 N
AACERI_AaceriAFL124C Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFL124C N
TBLA_0A06030 Tetrapisispora blattae TBLA_0A06030 N
NDAI_0I00910 Naumovozyma dairenensis NDAI_0I00910 N
Kpol_1002p32 Vanderwaltozyma polyspora Kpol_1002p32 N
KNAG_0F01810 Kazachstania naganishii KNAG_0F01810 N
KAFR_0A07030 Kazachstania africana KAFR_0A07030 N
Ecym_2171 Eremothecium cymbalariae Ecym_2171 N
CAGL0H08866g Candida glabrata CAGL0H08866g N
AGOS_AFL124C Ashbya gossypii AGOS_AFL124C N