PGSC0003DMG400007775 (Solanum tuberosum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 PGSC0003DMG400007775 T222161_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400020083 Homeodomain 81 122

Links

Other Homeodomain family TFs
Other Solanum tuberosum TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_6DL_D722B6E13 Triticum aestivum Traes_6DL_D722B6E13 N 0.686
cassava13400.valid.m1 Manihot esculenta cassava13400.valid.m1 N 0.686
BRADI3G23370 Brachypodium distachyon BRADI3G23370 N 0.685
GRMZM2G004334 Zea mays GRMZM2G004334 N 0.684
OLONG_008306 Oryza longistaminata OLONG_008306 N 0.684
OLONG_012459 Oryza longistaminata OLONG_012459 N 0.684
POPTR_0012s03550 Populus trichocarpa POPTR_0012s03550 N 0.684
mgf006959m Mimulus guttatus mgf006959m N 0.684
LjT36I04.40.nd Lotus japonicus LjT36I04.40.nd N 0.684
PDK_20s1410161g001 Phoenix dactylifera PDK_20s1410161g001 N 0.684
Bo1g131210 Brassica oleracea Bo1g131210 N 0.681
ANCCAN_11756 Ancylostoma caninum ANCCAN_11756 N 0.676
GRMZM2G123140 Zea mays GRMZM2G123140 I 0.674
Traes_1DL_9FB53E48A Triticum aestivum Traes_1DL_9FB53E48A N 0.674
MDP0000690933 Malus domestica MDP0000690933 N 0.674
Carubv10007218m.g Capsella rubella Carubv10007218m.g N 0.673
PGSC0003DMG400013263 Solanum tuberosum PGSC0003DMG400013263 N 0.669
PGSC0003DMG400019030 Solanum tuberosum PGSC0003DMG400019030 N 0.666
HMX2 Felis catus ENSFCAG00000023440 N 0.664
GSMUA_Achr3G23090_001 Musa acuminata GSMUA_Achr3G23090_001 N 0.664
gene23926-v1.0-hybrid Fragaria vesca gene23926-v1.0-hybrid N 0.664
Pavir.Fa02028 Panicum virgatum Pavir.Fa02028 N 0.664
PDK_20s1347391g002 Phoenix dactylifera PDK_20s1347391g002 N 0.664
WUBG_03180 Wuchereria bancrofti WUBG_03180 N 0.656
GH13586 Drosophila grimshawi FBgn0121062 N 0.656
F775_10961 Aegilops tauschii F775_10961 N 0.654
TCM_016582 Theobroma cacao TCM_016582 I 0.654
Traes_6BL_4301B7F15 Triticum aestivum Traes_6BL_4301B7F15 N 0.654
Ca_08015 Cicer arietinum Ca_08015 N 0.654
Gorai.003G184900 Gossypium raimondii Gorai.003G184900 I 0.654
OLONG_017944 Oryza longistaminata OLONG_017944 N 0.652
OS01G0788800 Oryza sativa OS01G0788800 N 0.652
OMERI08G08060 Oryza meridionalis OMERI08G08060 N 0.649
Traes_3AL_F42853DA5 Triticum aestivum Traes_3AL_F42853DA5 N 0.643
F775_01938 Aegilops tauschii F775_01938 N 0.633
EMX1 Oryctolagus cuniculus ENSOCUG00000008208 N 0.628
BRADI2G50510 Brachypodium distachyon BRADI2G50510 N 0.622
PLEOSDRAFT_1026389 Pleurotus ostreatus PLEOSDRAFT_1026389 N 0.622
gene25833-v1.0-hybrid Fragaria vesca gene25833-v1.0-hybrid N 0.622
Myotis_brandtii_DLX3_10017059 Myotis brandtii Myotis_brandtii_DLX3_10017059 N 0.617
Tal_R011355 Tyto alba Tal_R011355 N 0.617
GLYMA08G09430 Glycine max GLYMA08G09430 N 0.616
TRIUR3_32002 Triticum urartu TRIUR3_32002 N 0.614
TRIUR3_33331 Triticum urartu TRIUR3_33331 N 0.610
ANCCAN_27026 Ancylostoma caninum ANCCAN_27026 N 0.608
ANCCEY_10891 Ancylostoma ceylanicum ANCCEY_10891 N 0.608
PHUM118950 Pediculus humanus PHUM118950 N 0.607
TRE_0000162501 Trichobilharzia regenti TRE_0000162501 N 0.603
ENSTGUG00000011379 Taeniopygia guttata ENSTGUG00000011379 I 0.602
Aan_R001812 Calypte anna Aan_R001812 N 0.602
Aan_R007134 Calypte anna Aan_R007134 I 0.602
Afo_R002867 Aptenodytes forsteri Afo_R002867 I 0.602
Afo_R002868 Aptenodytes forsteri Afo_R002868 I 0.602
ENSTSYG00000005123 Tarsius syrichta ENSTSYG00000005123 N 0.600
Hba_10731 Heterorhabditis bacteriophora Hba_10731 N 0.600
SBAD_0000495201 Soboliphyme baturini SBAD_0000495201 N 0.600