CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ppa-cog-1
(
Pristionchus pacificus
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PPA04716
T222608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PPA04716
Homeodomain
91
137
KQSRPTFTGHQIFMLEKKFEQTKYLAGSDRAQLANELNMSESQVKVF
Links
Other
Homeodomain
family TFs
Other
Pristionchus pacificus
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5188
Brugia malayi
Bm5188
N
0.850
ASIM_0001695301
Anisakis simplex
ASIM_0001695301
N
0.819
EVEC_0000660801
Enterobius vermicularis
EVEC_0000660801
N
0.819
TCNE_0001839401
Toxocara canis
TCNE_0001839401
N
0.819
ANCDUO_24100
Ancylostoma duodenale
ANCDUO_24100
N
0.817
OFLC_0001516501
Onchocerca flexuosa
OFLC_0001516501
N
0.803
WUBG_08661
Wuchereria bancrofti
WUBG_08661
N
0.800
DICVIV_02945
Dictyocaulus viviparus
DICVIV_02945
N
0.800
D917_05078
Trichinella nativa
D917_05078
N
0.788
D917_08408
Trichinella nativa
D917_08408
N
0.788
ENSAPLG00000005538
Anas platyrhynchos
ENSAPLG00000005538
I
0.773
ENSSHAG00000002937
Sarcophilus harrisii
ENSSHAG00000002937
I
0.773
Gfo_R008628
Geospiza fortis
Gfo_R008628
I
0.773
nLs.2.1.2.g06018
Litomosoides sigmodontis
nLs.2.1.2.g06018
N
0.766
AAEL004033
Aedes aegypti
AAEL004033
N
0.765
ENSECAG00000018325
Equus caballus
ENSECAG00000018325
I
0.765
ENSOANG00000006212
Ornithorhynchus anatinus
ENSOANG00000006212
I
0.765
ENSPFOG00000002761
Poecilia formosa
ENSPFOG00000002761
I
0.765
NKX6-1
Sus scrofa
ENSSSCG00000009232
I
0.765
SINV25324
Solenopsis invicta
SINV25324
I
0.765
Ocbimv22025901m.g
Octopus bimaculoides
Ocbimv22025901m.g
N
0.765
CLEC002616
Cimex lectularius
CLEC002616
N
0.765
Sjc_0111830
Schistosoma japonicum
Sjc_0111830
N
0.765
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0
N
0.761
ENSMEUG00000009353
Macropus eugenii
ENSMEUG00000009353
I
0.755
NKX6-2
Procavia capensis
ENSPCAG00000000708
N
0.755
AMIN002697
Anopheles minimus
AMIN002697
N
0.750
CpipJ_CPIJ001377
Culex pipiens
CpipJ_CPIJ001377
N
0.747
ACEP17328
Atta cephalotes
ACEP17328
N
0.747
BGIBMGA010051
Bombyx mori
BGIBMGA010051
N
0.747
CapteG6193
Capitella teleta
CapteG6193
N
0.747
CPIJ001377
Culex quinquefasciatus
CPIJ001377
N
0.747
NKX6-1
Choloepus hoffmanni
ENSCHOG00000005454
I
0.747
ENSMICG00000006922
Microcebus murinus
ENSMICG00000006922
I
0.747
KGM_13904
Danaus plexippus
KGM_13904
N
0.747
MCINX004710
Melitaea cinxia
MCINX004710
N
0.747
PHUM359870
Pediculus humanus
PHUM359870
N
0.747
YQE_09155
Dendroctonus ponderosae
YQE_09155
N
0.747
Hsal_06171--XP_001121097.1_APIME
Harpegnathos saltator
Hsal_06171--XP_001121097.1_APIME
N
0.747
Myotis_brandtii_NKX6_10030510
Myotis brandtii
Myotis_brandtii_NKX6_10030510
N
0.747
HHAL007703-PA
Halyomorpha halys
HHAL007703-PA
N
0.747
LCUP008694
Lucilia cuprina
LCUP008694
N
0.747
LDEC017209
Leptinotarsa decemlineata
LDEC017209
N
0.747
AALB008452
Anopheles albimanus
AALB008452
N
0.747
AATE008437
Anopheles atroparvus
AATE008437
N
0.747
ACUA026159
Anopheles culicifacies
ACUA026159
N
0.747
ADIR006386
Anopheles dirus
ADIR006386
N
0.747
AEPI002734
Anopheles epiroticus
AEPI002734
N
0.747
AFAF005788
Anopheles farauti
AFAF005788
N
0.747
AMAM013696
Anopheles maculatus
AMAM013696
N
0.747
AMEC022035
Anopheles melas
AMEC022035
N
0.747
AMEM013182
Anopheles merus
AMEM013182
N
0.747
AQUA009532
Anopheles quadriannulatus
AQUA009532
N
0.747
ASIS022603
Anopheles sinensis
ASIS022603
N
0.747
PPAI007703
Phlebotomus papatasi
PPAI007703
N
0.747
A_02867
Schistosoma haematobium
A_02867
N
0.747
ECPE_0000358001
Echinostoma caproni
ECPE_0000358001
N
0.747
SCUD_0002097601
Schistosoma curassoni
SCUD_0002097601
N
0.747
SROB_0001257001
Schistosoma rodhaini
SROB_0001257001
N
0.747
TRE_0000644601
Trichobilharzia regenti
TRE_0000644601
N
0.747
PXEA_0000446101
Protopolystoma xenopodis
PXEA_0000446101
N
0.746
nRc.2.0.1.g06912
Romanomermis culicivorax
nRc.2.0.1.g06912
N
0.735
ISCW014430
Ixodes scapularis
ISCW014430
N
0.712
scaffold37-EXSNAP2012.8
Pristionchus exspectatus
scaffold37-EXSNAP2012.8
N
0.701
Afo_R002915
Aptenodytes forsteri
Afo_R002915
N
0.688