CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa017711mg
(
Prunus persica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
PRUPE_ppa017711mg
T222711_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN
NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.727
0.684
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN
NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.727
0.684
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD
HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.727
0.667
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD
HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.727
0.667
ATHB-51
M00867_2.00
Arabidopsis thaliana
ATWATKNN
NNMATWAT
PBM
Franco-Zorrilla et al.(2014)
ATHB51
0.626
0.526
ATHB-51
M06927_2.00
Arabidopsis thaliana
DNCAATAATTGAD
HTCAATTATTGNH
Dap-seq
OMalley et al.(2016)
LMI1_col_a
0.626
0.526
ATHB-51
M06928_2.00
Arabidopsis thaliana
NDNCAATAATTGA
TCAATTATTGNHN
Dap-seq
OMalley et al.(2016)
LMI1_colamp_a
0.626
0.526
ATHB-22
M02041_2.00
Arabidopsis thaliana
NNATAATWWWNNN
NNNWWWATTATNN
PBM
Weirauch et al.(2014)
pTH5883
0.623
0.526
ATHB-12
M00865_2.00
Arabidopsis thaliana
NNNNNNNN
NNNNNNNN
PBM
Franco-Zorrilla et al.(2014)
ATHB12
0.604
0.561
ATHB-12
M02045_2.00
Arabidopsis thaliana
BHWWWWWWDV
BHWWWWWWDV
PBM
Weirauch et al.(2014)
pTH7207
0.604
0.561
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ13703
Homeodomain
14
70
QHNKKRLTQEQVNLLERSFTSNNKLEPERKLLLAKQLGIPPRQVAIWYQNKRARWKT
Links
Other
Homeodomain
family TFs
Other
Prunus persica
TFs
182 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00027p00144540
Amborella trichopoda
AMTR_s00027p00144540
I
0.688
Aquca_009_01021
Aquilegia coerulea
Aquca_009_01021
I
0.635
ATHB22
Arabidopsis lyrata
Al_scaffold_0004_2163
I
0.616
ATHB51
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6000249
I
0.626
ATHB-3
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6001192
I
0.727
ATHB-12
Arabidopsis lyrata
fgenesh2_kg.5__2686__AT3G61890.1
I
0.604
ATHB52
Arabidopsis lyrata
fgenesh2_kg.8__1293__AT5G53980.1
I
0.693
ATHB20
Arabidopsis lyrata
scaffold_300109.1
I
0.727
ATHB-22
Arabidopsis thaliana
AT2G36610
D
0.623
ATHB-20
Arabidopsis thaliana
AT3G01220
D
0.727
ATHB-12
Arabidopsis thaliana
AT3G61890
D
0.604
ATHB-51
Arabidopsis thaliana
AT5G03790
D
0.626
HAT7
Arabidopsis thaliana
AT5G15150
I
0.727
ATHB-52
Arabidopsis thaliana
AT5G53980
I
0.693
Bostr.13158s0194
Boechera stricta
Bostr.13158s0194
I
0.604
Bostr.1460s0094
Boechera stricta
Bostr.1460s0094
I
0.727
Bostr.2128s0071
Boechera stricta
Bostr.2128s0071
I
0.626
Bostr.23794s0432
Boechera stricta
Bostr.23794s0432
I
0.654
Bostr.26833s0878
Boechera stricta
Bostr.26833s0878
I
0.693
Bostr.2902s0249
Boechera stricta
Bostr.2902s0249
I
0.727
BRADI4G35910
Brachypodium distachyon
BRADI4G35910
I
0.673
Bo12274s010
Brassica oleracea
Bo12274s010
I
0.691
Bo1g158730
Brassica oleracea
Bo1g158730
I
0.727
Bo2g005230
Brassica oleracea
Bo2g005230
I
0.626
Bo2g012410
Brassica oleracea
Bo2g012410
I
0.727
Bo2g042250
Brassica oleracea
Bo2g042250
I
0.686
Bo3g002560
Brassica oleracea
Bo3g002560
I
0.626
Bo3g010120
Brassica oleracea
Bo3g010120
I
0.727
Bo4g034490
Brassica oleracea
Bo4g034490
I
0.623
Bo8g097390
Brassica oleracea
Bo8g097390
I
0.604
Bo9g165360
Brassica oleracea
Bo9g165360
I
0.727
Bo9g181720
Brassica oleracea
Bo9g181720
I
0.626
Bra005259
Brassica rapa
Bra005259
I
0.623
Bra006285
Brassica rapa
Bra006285
I
0.727
Bra007637
Brassica rapa
Bra007637
I
0.604
Bra008717
Brassica rapa
Bra008717
I
0.727
Bra009510
Brassica rapa
Bra009510
I
0.626
Bra018155
Brassica rapa
Bra018155
I
0.615
Bra022687
Brassica rapa
Bra022687
I
0.686
Bra023506
Brassica rapa
Bra023506
I
0.727
Bra028820
Brassica rapa
Bra028820
I
0.626
Bra039135
Brassica rapa
Bra039135
I
0.727
PK15535.1
Cannabis sativa
PK15535.1
I
0.667
PK20392.1
Cannabis sativa
PK20392.1
D
0.727
Cagra.0154s0025
Capsella grandiflora
Cagra.0154s0025
I
0.626
Cagra.0228s0052
Capsella grandiflora
Cagra.0228s0052
I
0.654
Cagra.0463s0004
Capsella grandiflora
Cagra.0463s0004
I
0.626
Cagra.0483s0055
Capsella grandiflora
Cagra.0483s0055
I
0.604
Cagra.1036s0042
Capsella grandiflora
Cagra.1036s0042
I
0.727
Cagra.1390s0021
Capsella grandiflora
Cagra.1390s0021
I
0.727
Cagra.4622s0007
Capsella grandiflora
Cagra.4622s0007
I
0.693
Carubv10001498m.g
Capsella rubella
Carubv10001498m.g
I
0.727
Carubv10002440m.g
Capsella rubella
Carubv10002440m.g
I
0.626
Carubv10003464m.g
Capsella rubella
Carubv10003464m.g
I
0.626
Carubv10014214m.g
Capsella rubella
Carubv10014214m.g
I
0.727
Carubv10017952m.g
Capsella rubella
Carubv10017952m.g
I
0.604
Carubv10024148m.g
Capsella rubella
Carubv10024148m.g
I
0.654
Carubv10027280m.g
Capsella rubella
Carubv10027280m.g
I
0.693
evm.TU.supercontig_14.18
Carica papaya
evm.TU.supercontig_14.18
I
0.727
evm.TU.supercontig_5.106
Carica papaya
evm.TU.supercontig_5.106
I
0.667
evm.TU.supercontig_80.1
Carica papaya
evm.TU.supercontig_80.1
I
0.799
Ca_10527
Cicer arietinum
Ca_10527
I
0.727
Ca_20151
Cicer arietinum
Ca_20151
I
0.613
Ca_25882
Cicer arietinum
Ca_25882
I
0.604
Cla010510
Citrullus lanatus
Cla010510
I
0.727
Cla018017
Citrullus lanatus
Cla018017
I
0.635
Cla018641
Citrullus lanatus
Cla018641
I
0.661
Ciclev10009522m.g
Citrus clementina
Ciclev10009522m.g
I
0.715
Ciclev10012352m.g
Citrus clementina
Ciclev10012352m.g
I
0.727
Ciclev10012525m.g
Citrus clementina
Ciclev10012525m.g
I
0.669
orange1.1g035661m.g
Citrus sinensis
orange1.1g035661m.g
I
0.715
orange1.1g040769m.g
Citrus sinensis
orange1.1g040769m.g
I
0.669
orange1.1g041877m.g
Citrus sinensis
orange1.1g041877m.g
I
0.727
Cucsa.125070
Cucumis sativus
Cucsa.125070
I
0.661
Cucsa.158420
Cucumis sativus
Cucsa.158420
I
0.727
Cucsa.378700
Cucumis sativus
Cucsa.378700
I
0.635
Eucgr.A01421
Eucalyptus grandis
Eucgr.A01421
I
0.646
Eucgr.A01575
Eucalyptus grandis
Eucgr.A01575
I
0.629
Eucgr.I01934
Eucalyptus grandis
Eucgr.I01934
I
0.727
Eucgr.I02255
Eucalyptus grandis
Eucgr.I02255
I
0.727
Thhalv10014157m.g
Eutrema salsugineum
Thhalv10014157m.g
I
0.727
Thhalv10014547m.g
Eutrema salsugineum
Thhalv10014547m.g
I
0.626
Thhalv10014905m.g
Eutrema salsugineum
Thhalv10014905m.g
I
0.681
Thhalv10015784m.g
Eutrema salsugineum
Thhalv10015784m.g
I
0.626
Thhalv10017567m.g
Eutrema salsugineum
Thhalv10017567m.g
I
0.643
Thhalv10021334m.g
Eutrema salsugineum
Thhalv10021334m.g
I
0.727
gene18656-v1.0-hybrid
Fragaria vesca
gene18656-v1.0-hybrid
I
0.671
gene24976-v1.0-hybrid
Fragaria vesca
gene24976-v1.0-hybrid
I
0.812
gene28322-v1.0-hybrid
Fragaria vesca
gene28322-v1.0-hybrid
I
0.727
gene30097-v1.0-hybrid
Fragaria vesca
gene30097-v1.0-hybrid
I
0.667
GLYMA06G35050
Glycine max
GLYMA06G35050
I
0.771
GLYMA09G37410
Glycine max
GLYMA09G37410
I
0.727
GLYMA10G07440
Glycine max
GLYMA10G07440
I
0.667
GLYMA12G18720
Glycine max
GLYMA12G18720
I
0.686
GLYMA13G05270
Glycine max
GLYMA13G05270
I
0.697
GLYMA13G21330
Glycine max
GLYMA13G21330
I
0.667
GLYMA18G49290
Glycine max
GLYMA18G49290
I
0.727
GLYMA19G02490
Glycine max
GLYMA19G02490
I
0.727
Gorai.001G256300
Gossypium raimondii
Gorai.001G256300
I
0.705
Gorai.002G067100
Gossypium raimondii
Gorai.002G067100
I
0.771
Gorai.002G244000
Gossypium raimondii
Gorai.002G244000
I
0.640
Gorai.002G244200
Gossypium raimondii
Gorai.002G244200
I
0.667
Gorai.006G022100
Gossypium raimondii
Gorai.006G022100
I
0.727
Gorai.009G409600
Gossypium raimondii
Gorai.009G409600
I
0.635
Gorai.012G055400
Gossypium raimondii
Gorai.012G055400
I
0.655
Lus10003492.g
Linum usitatissimum
Lus10003492.g
I
0.763
Lus10008641.g
Linum usitatissimum
Lus10008641.g
I
0.635
Lus10013103.g
Linum usitatissimum
Lus10013103.g
I
0.763
Lus10035583.g
Linum usitatissimum
Lus10035583.g
I
0.635
chr2.LjT39I02.10.nc
Lotus japonicus
chr2.LjT39I02.10.nc
I
0.727
LjSGA_022706.2
Lotus japonicus
LjSGA_022706.2
I
0.689
MDP0000119544
Malus domestica
MDP0000119544
I
0.667
MDP0000124827
Malus domestica
MDP0000124827
I
0.727
MDP0000134241
Malus domestica
MDP0000134241
I
0.667
MDP0000146339
Malus domestica
MDP0000146339
I
0.858
MDP0000311522
Malus domestica
MDP0000311522
I
0.638
MDP0000737128
Malus domestica
MDP0000737128
I
0.727
MDP0000738604
Malus domestica
MDP0000738604
I
0.667
MDP0000909160
Malus domestica
MDP0000909160
I
0.823
cassava13234.valid.m1
Manihot esculenta
cassava13234.valid.m1
I
0.727
cassava14646.m1
Manihot esculenta
cassava14646.m1
I
0.635
cassava34082.m1
Manihot esculenta
cassava34082.m1
I
0.635
cassava39955.m1
Manihot esculenta
cassava39955.m1
I
0.727
cassava46810.m1
Manihot esculenta
cassava46810.m1
I
0.606
MTR_1g061660
Medicago truncatula
MTR_1g061660
I
0.707
MTR_5g038280
Medicago truncatula
MTR_5g038280
I
0.604
MTR_6g011610
Medicago truncatula
MTR_6g011610
I
0.727
mgf013301m
Mimulus guttatus
mgf013301m
I
0.740
mgf019824m
Mimulus guttatus
mgf019824m
I
0.635
mgf022748m
Mimulus guttatus
mgf022748m
I
0.637
mgf025174m
Mimulus guttatus
mgf025174m
I
0.685
GSMUA_Achr10G18860_001
Musa acuminata
GSMUA_Achr10G18860_001
I
0.727
GSMUA_Achr4G00550_001
Musa acuminata
GSMUA_Achr4G00550_001
I
0.727
GSMUA_Achr6G10660_001
Musa acuminata
GSMUA_Achr6G10660_001
I
0.720
GSMUA_Achr6G36450_001
Musa acuminata
GSMUA_Achr6G36450_001
I
0.700
Pavir.Ba01249
Panicum virgatum
Pavir.Ba01249
I
0.673
Pavir.Bb02633
Panicum virgatum
Pavir.Bb02633
I
0.673
Pavir.Hb01447
Panicum virgatum
Pavir.Hb01447
I
0.623
POPTR_0001s40540
Populus trichocarpa
POPTR_0001s40540
I
0.768
POPTR_0006s11890
Populus trichocarpa
POPTR_0006s11890
I
0.667
POPTR_0011s11510
Populus trichocarpa
POPTR_0011s11510
I
0.768
POPTR_0017s04820
Populus trichocarpa
POPTR_0017s04820
I
0.657
POPTR_0017s11800
Populus trichocarpa
POPTR_0017s11800
I
0.727
Pm011328
Prunus mume
Pm011328
I
0.867
Pm015861
Prunus mume
Pm015861
I
0.727
Pm018314
Prunus mume
Pm018314
I
0.671
Pm026270
Prunus mume
Pm026270
I
0.667
PRUPE_ppa010647mg
Prunus persica
PRUPE_ppa010647mg
I
0.671
PRUPE_ppa015952mg
Prunus persica
PRUPE_ppa015952mg
I
0.667
PRUPE_ppa020465mg
Prunus persica
PRUPE_ppa020465mg
I
0.727
29815.m000499
Ricinus communis
29815.m000499
I
0.667
29822.m003500
Ricinus communis
29822.m003500
I
0.727
29983.m003123
Ricinus communis
29983.m003123
I
0.656
SapurV1A.0207s0080
Salix purpurea
SapurV1A.0207s0080
I
0.768
SapurV1A.0226s0110
Salix purpurea
SapurV1A.0226s0110
I
0.672
SapurV1A.1260s0050
Salix purpurea
SapurV1A.1260s0050
I
0.727
SapurV1A.2065s0030
Salix purpurea
SapurV1A.2065s0030
I
0.727
SapurV1A.2554s0010
Salix purpurea
SapurV1A.2554s0010
I
0.656
SapurV1A.3101s0010
Salix purpurea
SapurV1A.3101s0010
I
0.656
Si030983m.g
Setaria italica
Si030983m.g
I
0.673
Solyc02g077590.1
Solanum lycopersicum
Solyc02g077590.1
I
0.683
Solyc03g082550.2
Solanum lycopersicum
Solyc03g082550.2
I
0.633
Solyc06g053220.2
Solanum lycopersicum
Solyc06g053220.2
I
0.637
Solyc07g062790.1
Solanum lycopersicum
Solyc07g062790.1
I
0.719
Solyc09g008810.2
Solanum lycopersicum
Solyc09g008810.2
I
0.637
PGSC0003DMG400002692
Solanum tuberosum
PGSC0003DMG400002692
I
0.637
PGSC0003DMG400005472
Solanum tuberosum
PGSC0003DMG400005472
I
0.631
PGSC0003DMG400018509
Solanum tuberosum
PGSC0003DMG400018509
I
0.633
PGSC0003DMG400021278
Solanum tuberosum
PGSC0003DMG400021278
I
0.729
PGSC0003DMG400031777
Solanum tuberosum
PGSC0003DMG400031777
I
0.728
PGSC0003DMG402012439
Solanum tuberosum
PGSC0003DMG402012439
I
0.720
Sb02g030660
Sorghum bicolor
Sb02g030660
I
0.673
TCM_018470
Theobroma cacao
TCM_018470
I
0.727
TCM_022391
Theobroma cacao
TCM_022391
I
0.667
TCM_031644
Theobroma cacao
TCM_031644
I
0.804
VIT_08s0007g04200
Vitis vinifera
VIT_08s0007g04200
I
0.691
VIT_10s0003g00380
Vitis vinifera
VIT_10s0003g00380
I
0.740
VIT_16s0098g01170
Vitis vinifera
VIT_16s0098g01170
I
0.713
VIT_18s0001g06430
Vitis vinifera
VIT_18s0001g06430
I
0.722
VIT_19s0014g02110
Vitis vinifera
VIT_19s0014g02110
I
0.782
GRMZM2G034113
Zea mays
GRMZM2G034113
I
0.673
GRMZM2G041462
Zea mays
GRMZM2G041462
I
0.673