SELMODRAFT_450553 (Selaginella moellendorffii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 SELMODRAFT_450553 T223113_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HDG11
M02039_2.00
Arabidopsis thaliana
DCATTWAWKD

HMWTWAATGH
PBM
Weirauch et al.(2014)
pTH7664
0.853 0.807
HDG11
M06904_2.00
Arabidopsis thaliana
DCATTWAWTRH

DYAWTWAATGH
Dap-seq
OMalley et al.(2016)
EDT1_col
0.853 0.807
PK24181.1
M01252_2.00
Cannabis sativa
NNNNNNNHDH

DHDNNNNNNN
PBM
Lambert et al.(2019)
pTH11300
0.837 0.807
ATML1
M02048_2.00
Arabidopsis thaliana
NNHNRHYRNN

NNYRDYNDNN
PBM
Weirauch et al.(2014)
pTH8203
0.834 0.825
ATML1
M10626_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ML1_01
0.834 0.825
PDF2
M06921_2.00
Arabidopsis thaliana
WNVGAATATTCYHTN

NADRGAATATTCBNW
Dap-seq
OMalley et al.(2016)
PDF2_col
0.822 0.807
PDF2
M10625_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$PDF2_01
0.822 0.807
HDG1
M06917_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_col100_a
0.800 0.754
HDG1
M06918_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG1_colamp_a
0.800 0.754
HDG9
M10628_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG9_01
0.791 0.632
ANL2
M02046_2.00
Arabidopsis thaliana
NCATTWATKNN

NNMATWAATGN
PBM
Weirauch et al.(2014)
pTH8244
0.784 0.789
ANL2
M06919_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
ANL2_col_a
0.784 0.789
ANL2
M06920_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
ANL2_colamp_a
0.784 0.789
HDG7
M06931_2.00
Arabidopsis thaliana
DCATTAAWTRH

DYAWTTAATGH
Dap-seq
OMalley et al.(2016)
HDG7_col_a
0.738 0.667
HDG7
M10629_2.00
Arabidopsis thaliana Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$HDG7_01
0.738 0.667
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ10492 Homeodomain 136 192

Links

Other Homeodomain family TFs
Other Selaginella moellendorffii TFs

618 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ALNC14_077410 Albugo laibachii ALNC14_077410 N
F443_15086 Phytophthora parasitica F443_15086 N
fgenesh_scip_prom.28083.6775 Phytophthora lateralis fgenesh_scip_prom.28083.6775 N
maker-par_contig_36-snap-gene-0.22 Pythium arrhenomanes maker-par_contig_36-snap-gene-0.22 N
Physo135098 Phytophthora sojae Physo135098 N
PYU1_G009725 Pythium ultimum PYU1_G009725 N
snap_masked-pag1_scaffold_1279-abinit-gene-0.4 Pythium aphanidermatum snap_masked-pag1_scaffold_1279-abinit-gene-0.4 N
snap_masked-pve_contig_1278-abinit-gene-0.3 Pythium vexans snap_masked-pve_contig_1278-abinit-gene-0.3 N