Traes_4AL_99A941299 (Triticum aestivum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Traes_4AL_99A941299 T224194_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
estExt_gwp_gw1.C_70211
M02220_2.00
Physcomitrella patens
HMATNANDNN

NNHNTNATKD
PBM
Weirauch et al.(2014)
pTH8489
0.813 0.768
ATHB-13
M06900_2.00
Arabidopsis thaliana
HYAATAATTDD

HHAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB13_col_a
0.790 0.696
ATHB-13
M06901_2.00
Arabidopsis thaliana
NYAATAATTRW

WYAATTATTRN
Dap-seq
OMalley et al.(2016)
ATHB13_colamp_a
0.790 0.696
HAT5
M06914_2.00
Arabidopsis thaliana
NHAATAATTDW

WHAATTATTDN
Dap-seq
OMalley et al.(2016)
HAT5_col_a
0.781 0.750
HAT5
M06915_2.00
Arabidopsis thaliana
WNYAATAATTRWDN

NHWYAATTATTRNW
Dap-seq
OMalley et al.(2016)
HAT5_colamp_a
0.781 0.750
HAT5
M02683_2.00
Arabidopsis thaliana
SCAATAATTNNV

BNNAATTATTGS
SELEX
Mathelier et al.(2014)
MA0008.2
0.781 0.750
HAT5
M10624_2.00
Arabidopsis thaliana
YSCAATAATTNNVN

NBNNAATTATTGSR
Transfac
Matys et al.(2006)
P$ATHB1_01
0.781 0.750
ATHB-6
M02040_2.00
Arabidopsis thaliana
HATNATTDN

NHAATNATD
PBM
Weirauch et al.(2014)
pTH7670
0.776 0.714
ATHB-16
M02050_2.00
Arabidopsis thaliana
YAATMATT

AATKATTR
PBM
Weirauch et al.(2014)
pTH7270
0.776 0.714
ATHB-6
M06909_2.00
Arabidopsis thaliana
NNNHATKATTR

YAATMATDNNN
Dap-seq
OMalley et al.(2016)
ATHB6_col_a
0.776 0.714
ATHB-6
M06910_2.00
Arabidopsis thaliana
NCAATAATTRN

NYAATTATTGN
Dap-seq
OMalley et al.(2016)
ATHB6_colamp_a
0.776 0.714
ATHB-5
M06932_2.00
Arabidopsis thaliana
NYAATMATTND

HNAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_col_a
0.758 0.732
ATHB-5
M06933_2.00
Arabidopsis thaliana
NYAATMATTN

NAATKATTRN
Dap-seq
OMalley et al.(2016)
ATHB5_colamp_a
0.758 0.732
ATHB-5
M02684_2.00
Arabidopsis thaliana
CAATVATTGVVSV

BSBBCAATBATTG
SELEX
Mathelier et al.(2014)
MA0110.2
0.758 0.732
ATHB-5
M10630_2.00
Arabidopsis thaliana
CAATVATTG

CAATBATTG
Transfac
Matys et al.(2006)
P$ATHB5_01
0.758 0.732
ATHB-53
M06934_2.00
Arabidopsis thaliana
HMAATAATTRD

HYAATTATTKD
Dap-seq
OMalley et al.(2016)
ATHB53_col_a
0.754 0.625
ATHB-53
M06935_2.00
Arabidopsis thaliana
NNWHCAATWATTDDN

NHHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB53_colamp_a
0.754 0.625
ATHB-21
M06907_2.00
Arabidopsis thaliana
NNWHCAATWATTDN

NHAATWATTGDWNN
Dap-seq
OMalley et al.(2016)
ATHB21_col_a
0.751 0.696
ATHB-21
M06908_2.00
Arabidopsis thaliana
WWDDNNNHAATWATTGDTNN

NNAHCAATWATTDNNNHHWW
Dap-seq
OMalley et al.(2016)
ATHB21_colamp_a
0.751 0.696
HB-5
M06924_2.00
Arabidopsis thaliana
NNAHCAATWATTKDNNNHWWH

DWWDNNNHMAATWATTGDTNN
Dap-seq
OMalley et al.(2016)
ATHB40_col_a
0.749 0.643
HB-5
M06925_2.00
Arabidopsis thaliana
HHAATWATTGDWNN

NNWHCAATWATTDD
Dap-seq
OMalley et al.(2016)
ATHB40_colamp_a
0.749 0.643
PK20392.1
M01250_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11331
0.655 0.714
PK20392.1
M01251_2.00
Cannabis sativa
NHAATMATDN

NHATKATTDN
PBM
Lambert et al.(2019)
pTH11332
0.655 0.714
ATHB-20
M06912_2.00
Arabidopsis thaliana
HYAATAATTRD

HYAATTATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_col_a
0.635 0.696
ATHB-20
M06913_2.00
Arabidopsis thaliana
HYAATMATTRD

HYAATKATTRD
Dap-seq
OMalley et al.(2016)
ATHB20_colamp_a
0.635 0.696
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Traes_4AL_99A941299.1 Homeodomain 61 116

Links

Other Homeodomain family TFs
Other Triticum aestivum TFs

796 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_115352 Agaricus bisporus AGABI2DRAFT_115352 N
CC1G_05197 Coprinopsis cinerea CC1G_05197 N
CERSUDRAFT_113870 Ceriporiopsis subvermispora CERSUDRAFT_113870 N
CY34DRAFT_86381 Suillus luteus CY34DRAFT_86381 N
estExt_fgenesh2_pm.C_20470 Heterobasidion annosum estExt_fgenesh2_pm.C_20470 N
estExt_fgeneshPB_pg.C_20275 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_20275 N
estExt_fgeneshPB_pg.C_90126 Phycomyces blakesleeanus estExt_fgeneshPB_pg.C_90126 N
fgenesh1_pg.C_scaffold_1000689 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_1000689 N
FIBRA_05018 Fibroporia radiculosa FIBRA_05018 N
FOMPIDRAFT_125143 Fomitopsis pinicola FOMPIDRAFT_125143 N
GALMADRAFT_221259 Galerina marginata GALMADRAFT_221259 N
GLOTRDRAFT_120223 Gloeophyllum trabeum GLOTRDRAFT_120223 N
GYMLUDRAFT_40883 Gymnopus luxurians GYMLUDRAFT_40883 N
HETIRDRAFT_457419 Heterobasidion irregulare HETIRDRAFT_457419 N
JAAARDRAFT_124082 Jaapia argillacea JAAARDRAFT_124082 N
K443DRAFT_163922 Laccaria amethystina K443DRAFT_163922 N
LACBIDRAFT_325071 Laccaria bicolor LACBIDRAFT_325071 N
M378DRAFT_7389 Amanita muscaria M378DRAFT_7389 N
M404DRAFT_122646 Pisolithus tinctorius M404DRAFT_122646 N
M407DRAFT_110022 Tulasnella calospora M407DRAFT_110022 N
M408DRAFT_271581 Serendipita vermifera M408DRAFT_271581 N
M413DRAFT_40683 Hebeloma cylindrosporum M413DRAFT_40683 N
Moror_6620 Moniliophthora roreri Moror_6620 N
PAXRUDRAFT_821418 Paxillus rubicundulus PAXRUDRAFT_821418 N
PHLGIDRAFT_37209 Phlebiopsis gigantea PHLGIDRAFT_37209 N
PIIN_06315 Piriformospora indica PIIN_06315 N
PILCRDRAFT_289090 Piloderma croceum PILCRDRAFT_289090 N
PISMIDRAFT_677699 Pisolithus microcarpus PISMIDRAFT_677699 N
PLEOSDRAFT_172367 Pleurotus ostreatus PLEOSDRAFT_172367 N
SCLCIDRAFT_127645 Scleroderma citrinum SCLCIDRAFT_127645 N
SERLA73DRAFT_94127 Serpula lacrymans SERLA73DRAFT_94127 N