Ca_01974 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_01974 T225399_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WUS
M06905_2.00 		Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA		 Dap-seq
OMalley et al.(2016)
WUS1_col_a 		0.832 0.860
WUS
M06906_2.00 		Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA		 Dap-seq
OMalley et al.(2016)
WUS1_colamp_a 		0.832 0.860
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_01974 Homeodomain 27 89

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

464 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G41470 Brachypodium distachyon BRADI3G41470 N
BRADI4G34800 Brachypodium distachyon BRADI4G34800 N
Ca_22941 Cicer arietinum Ca_22941 N
Cla019597 Citrullus lanatus Cla019597 N
Cucsa.157080 Cucumis sativus Cucsa.157080 N
Eucgr.K02205 Eucalyptus grandis Eucgr.K02205 N
Eucgr.H00826 Eucalyptus grandis Eucgr.H00826 N
Eucgr.G01047 Eucalyptus grandis Eucgr.G01047 N
gene01364-v1.0-hybrid Fragaria vesca gene01364-v1.0-hybrid N
MLOC_55957 Hordeum vulgare MLOC_55957 N
LPERR08G18520 Leersia perrieri LPERR08G18520 N
LPERR09G12100 Leersia perrieri LPERR09G12100 N
Lus10032004.g Linum usitatissimum Lus10032004.g N
mgf006124m Mimulus guttatus mgf006124m N
OBART08G21800 Oryza barthii OBART08G21800 N
OBART09G15890 Oryza barthii OBART09G15890 N
OB09G22520 Oryza brachyantha OB09G22520 N
ORGLA09G0123200 Oryza glaberrima ORGLA09G0123200 N
ORGLA08G0227400 Oryza glaberrima ORGLA08G0227400 N
OGLUM09G16460 Oryza glumaepatula OGLUM09G16460 N
OGLUM08G23090 Oryza glumaepatula OGLUM08G23090 N
BGIOSGA031062 Oryza indica BGIOSGA031062 N
OLONG_020119 Oryza longistaminata OLONG_020119 N
OMERI06G13840 Oryza meridionalis OMERI06G13840 N
OMERI09G11810 Oryza meridionalis OMERI09G11810 N
ONIVA09G17010 Oryza nivara ONIVA09G17010 N
ONIVA08G24840 Oryza nivara ONIVA08G24840 N
OPUNC09G14320 Oryza punctata OPUNC09G14320 N
OPUNC08G19870 Oryza punctata OPUNC08G19870 N
ORUFI08G24230 Oryza rufipogon ORUFI08G24230 N
ORUFI09G17170 Oryza rufipogon ORUFI09G17170 N
OS08G0535800 Oryza sativa OS08G0535800 N
OS09G0509100 Oryza sativa OS09G0509100 N
Pavir.J23083 Panicum virgatum Pavir.J23083 N
Pavir.J11699 Panicum virgatum Pavir.J11699 N
Pavir.J04931 Panicum virgatum Pavir.J04931 N
Pavir.Fb00689 Panicum virgatum Pavir.Fb00689 N
SELMODRAFT_69130 Selaginella moellendorffii SELMODRAFT_69130 N
SELMODRAFT_69131 Selaginella moellendorffii SELMODRAFT_69131 N
Si030942m.g Setaria italica Si030942m.g N
Si014408m.g Setaria italica Si014408m.g N
Sb02g029460 Sorghum bicolor Sb02g029460 N
Traes_5DL_36AE1EF2B Triticum aestivum Traes_5DL_36AE1EF2B N
Traes_5BL_456C3408A Triticum aestivum Traes_5BL_456C3408A N
TRIUR3_25303 Triticum urartu TRIUR3_25303 N
GRMZM2G179049 Zea mays GRMZM2G179049 N
GRMZM2G100583 Zea mays GRMZM2G100583 N
GRMZM2G054277 Zea mays GRMZM2G054277 N
GRMZM2G054252 Zea mays GRMZM2G054252 N