Ca_14560 (Cicer arietinum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Ca_14560 T225454_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATHB-9
M06898_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
PHV_col_a 		0.862 0.929
ATHB-9
M02682_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 SELEX
Mathelier et al.(2014)
MA0573.1 		0.862 0.929
ATHB-9
M10623_2.00 		Arabidopsis thaliana
HNHHGTAATGATTRCDYBS
SVRHGYAATCATTACDDND		 Transfac
Matys et al.(2006)
P$ATHB9_01 		0.862 0.929
ATHB-15
M00864_2.00 		Arabidopsis thaliana
AATAATTACT
AGTAATTATT		 PBM
Franco-Zorrilla et al.(2014)
ICU4 		0.857 0.911
ATHB-15
M06899_2.00 		Arabidopsis thaliana
DWWDRTAATGATKAH
DTMATCATTAYHWWH		 Dap-seq
OMalley et al.(2016)
ATHB15_col_a 		0.857 0.911
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_14560 Homeodomain 25 84

Links

Other Homeodomain family TFs
Other Cicer arietinum TFs

335 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSP00000240050-D1 Bos grunniens ENSP00000240050-D1 N
MTERF2 Bos taurus ENSBTAG00000010144 N
MTERF2 Callithrix jacchus ENSCJAG00000015094 N
MTERF2 Cavia porcellus ENSCPOG00000006958 N
Mterf2 Dipodomys ordii ENSDORG00000004167 N
MTERF2 Gorilla gorilla ENSGGOG00000025492 N
MTERF2 Homo sapiens ENSG00000120832 N
ENSSTOG00000010181 Ictidomys tridecemlineatus ENSSTOG00000010181 N
ENSMEUG00000013008 Macropus eugenii ENSMEUG00000013008 N
MTERF2 Monodelphis domestica ENSMODG00000001589 N
Mterf2 Mus musculus ENSMUSG00000049038 N
Myotis_brandtii_Cry1_10020414 Myotis brandtii Myotis_brandtii_Cry1_10020414 N
ENSNLEG00000006719 Nomascus leucogenys ENSNLEG00000006719 N
MTERF2 Ochotona princeps ENSOPRG00000008669 N
MTERF2 Pan troglodytes ENSPTRG00000005395 N
MTERF2 Procavia capensis ENSPCAG00000008234 N
Mterf2 Rattus norvegicus ENSRNOG00000006978 N
ENSTSYG00000010530 Tarsius syrichta ENSTSYG00000010530 N
MTERF2 Tursiops truncatus ENSTTRG00000012809 N
MTERF2 Vicugna pacos ENSVPAG00000008539 N