cassava16038.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava16038.m1 T227040_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATH1
M10627_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ATH1_01 		0.846 0.902
Q5EVH4_OIKDI
M02227_2.00 		Oikopleura dioica
NTGACAKN
NMTGTCAN		 PBM
Weirauch et al.(2014)
pTH6041 		0.604 0.510
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava16038.m1 Homeodomain 484 537

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

952 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004412 Ailuropoda melanoleuca ENSAMEG00000004412 N
MYCL Bos taurus ENSBTAG00000006338 N
ENSBTAP00000050548-D1 Bos grunniens ENSBTAP00000050548-D1 N
MYCL Canis familiaris ENSCAFG00000003022 N
ENSCJAG00000002700 Callithrix jacchus ENSCJAG00000002700 N
ENSCPOG00000012827 Cavia porcellus ENSCPOG00000012827 N
ENSCSAG00000001138 Chlorocebus sabaeus ENSCSAG00000001138 N
MYCL Dasypus novemcinctus ENSDNOG00000001996 N
MYCL Equus caballus ENSECAG00000008765 N
MYCL Erinaceus europaeus ENSEEUG00000004078 N
MYCL Felis catus ENSFCAG00000022640 N
MYCL Homo sapiens ENSG00000116990 N
MYCL Gorilla gorilla ENSGGOG00000001693 N
ENSLAFG00000001935 Loxodonta africana ENSLAFG00000001935 N
ENSMEUG00000000536 Macropus eugenii ENSMEUG00000000536 N
ENSMICG00000016303 Microcebus murinus ENSMICG00000016303 N
MYCL Myotis lucifugus ENSMLUG00000000337 N
MYCL Macaca mulatta ENSMMUG00000016223 N
ENSMMUP00000021322 Macaca fascicularis ENSMMUP00000021322 N
MYCL Monodelphis domestica ENSMODG00000017647 N
ENSMPUG00000014286 Mustela putorius furo ENSMPUG00000014286 N
Mycl Mus musculus ENSMUSG00000028654 N
ENSNLEG00000012063 Nomascus leucogenys ENSNLEG00000012063 N
ENSOARG00000020147 Ovis aries ENSOARG00000020147 N
MYCL Oryctolagus cuniculus ENSOCUG00000025113 N
MYCL Otolemur garnettii ENSOGAG00000015380 N
MYCL Ochotona princeps ENSOPRG00000003229 N
ENSPANG00000010238 Papio anubis ENSPANG00000010238 N
ENSPPYG00000001498 Pongo abelii ENSPPYG00000001498 N
MYCL Pan troglodytes ENSPTRG00000000580 N
MYCL Pteropus vampyrus ENSPVAG00000003347 N
Mycl Rattus norvegicus ENSRNOG00000014259 N
ENSSHAG00000018449 Sarcophilus harrisii ENSSHAG00000018449 N
ENSSSCG00000003668 Sus scrofa ENSSSCG00000003668 N
ENSSTOG00000005037 Ictidomys tridecemlineatus ENSSTOG00000005037 N
ENSTSYG00000009275 Tarsius syrichta ENSTSYG00000009275 N
MYCL Tursiops truncatus ENSTTRG00000005113 N
Myotis_brandtii_MYCL1_10028964 Myotis brandtii Myotis_brandtii_MYCL1_10028964 N
mycl Xenopus tropicalis XB-GENE-6453835 N