cassava36876.valid.m1 (Manihot esculenta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 cassava36876.valid.m1 T227116_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ANL2
M02046_2.00 		Arabidopsis thaliana
NCATTWATKNN
NNMATWAATGN		 PBM
Weirauch et al.(2014)
pTH8244 		0.867 0.965
ANL2
M06919_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_col_a 		0.867 0.965
ANL2
M06920_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
ANL2_colamp_a 		0.867 0.965
HDG1
M06917_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_col100_a 		0.839 0.825
HDG1
M06918_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG1_colamp_a 		0.839 0.825
PK24181.1
M01252_2.00 		Cannabis sativa
NNNNNNNHDH
DHDNNNNNNN		 PBM
Lambert et al.(2019)
pTH11300 		0.806 0.772
HDG11
M02039_2.00 		Arabidopsis thaliana
DCATTWAWKD
HMWTWAATGH		 PBM
Weirauch et al.(2014)
pTH7664 		0.790 0.754
HDG11
M06904_2.00 		Arabidopsis thaliana
DCATTWAWTRH
DYAWTWAATGH		 Dap-seq
OMalley et al.(2016)
EDT1_col 		0.790 0.754
ATML1
M02048_2.00 		Arabidopsis thaliana
NNHNRHYRNN
NNYRDYNDNN		 PBM
Weirauch et al.(2014)
pTH8203 		0.786 0.772
PDF2
M06921_2.00 		Arabidopsis thaliana
WNVGAATATTCYHTN
NADRGAATATTCBNW		 Dap-seq
OMalley et al.(2016)
PDF2_col 		0.786 0.772
ATML1
M10626_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ML1_01 		0.786 0.772
PDF2
M10625_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PDF2_01 		0.786 0.772
HDG7
M06931_2.00 		Arabidopsis thaliana
DCATTAAWTRH
DYAWTTAATGH		 Dap-seq
OMalley et al.(2016)
HDG7_col_a 		0.786 0.772
HDG7
M10629_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG7_01 		0.786 0.772
HDG9
M10628_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$HDG9_01 		0.769 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava36876.valid.m1 Homeodomain 116 172

Links

Other Homeodomain family TFs
Other Manihot esculenta TFs

617 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_01197 Capronia coronata A1O1_01197 I
A1O3_08778 Capronia epimyces A1O3_08778 I
A1O5_06047 Cladophialophora psammophila A1O5_06047 I
A1O7_01726 Cladophialophora yegresii A1O7_01726 I
A1O9_00742 Exophiala aquamarina A1O9_00742 I
AB07914.1 Alternaria brassicicola AB07914.1 I
ACRE_011600 Acremonium chrysogenum ACRE_011600 I
ACYPI006576 Acyrthosiphon pisum ACYPI006576 I
AOL_s00076g81 Arthrobotrys oligospora AOL_s00076g81 I
AUEXF2481DRAFT_32739 Aureobasidium subglaciale AUEXF2481DRAFT_32739 I
BATDEDRAFT_89692 Batrachochytrium dendrobatidis BATDEDRAFT_89692 I
BBA_01214 Beauveria bassiana BBA_01214 I
Bcin01g08840 Botrytis cinerea Bcin01g08840 I
BGHDH14_bgh04339 Blumeria graminis BGHDH14_bgh04339 I
BN946_scf184999.g62 Trametes cinnabarina BN946_scf184999.g62 I
Ca_10804 Cicer arietinum Ca_10804 I
Ca_12487 Cicer arietinum Ca_12487 I
CC1G_11882 Coprinopsis cinerea CC1G_11882 I
CCM_01555 Cordyceps militaris CCM_01555 I
CERSUDRAFT_85760 Ceriporiopsis subvermispora CERSUDRAFT_85760 I
CFIO01_13531 Colletotrichum fioriniae CFIO01_13531 I
CGGC5_9539 Colletotrichum gloeosporioides CGGC5_9539 I
CH063_04081 Colletotrichum higginsianum CH063_04081 I
chr2.CM0225.40.nc Lotus japonicus chr2.CM0225.40.nc I
Cla017295 Citrullus lanatus Cla017295 I
CLEC003860 Cimex lectularius CLEC003860 I
CMQ_8074 Grosmannia clavigera CMQ_8074 I
CNF04730 Cryptococcus neoformans CNF04730 I
COCC4DRAFT_135921 Bipolaris maydis COCC4DRAFT_135921 I
COCCADRAFT_24603 Bipolaris zeicola COCCADRAFT_24603 I
COCMIDRAFT_97534 Bipolaris oryzae COCMIDRAFT_97534 I
COCSADRAFT_180514 Bipolaris sorokiniana COCSADRAFT_180514 I
COCSADRAFT_226282 Bipolaris sorokiniana COCSADRAFT_226282 I
COCVIDRAFT_115390 Bipolaris victoriae COCVIDRAFT_115390 I
COCVIDRAFT_17843 Bipolaris victoriae COCVIDRAFT_17843 I
CPUR_04901 Claviceps purpurea CPUR_04901 I
CSUB01_00364 Colletotrichum sublineola CSUB01_00364 I
CTHT_0053790 Chaetomium thermophilum CTHT_0053790 I
Cucsa.339070 Cucumis sativus Cucsa.339070 I
DACRYDRAFT_23197 Dacryopinax sp DACRYDRAFT_23197 I
DICSQDRAFT_109066 Dichomitus squalens DICSQDRAFT_109066 I
DRE_06603 Drechslerella stenobrocha DRE_06603 I
EPUS_09213 Endocarpon pusillum EPUS_09213 I
estExt_fgenesh1_pg.C_2230007 Physcomitrella patens estExt_fgenesh1_pg.C_2230007 I
estExt_fgenesh3_kg.C_40082 Neurospora discreta estExt_fgenesh3_kg.C_40082 I
EV44_g2383 Erysiphe necator EV44_g2383 I
F503_04824 Ophiostoma piceae uamh F503_04824 I
FFUJ_02729 Fusarium fujikuroi FFUJ_02729 I
fgenesh1_pg.C_scaffold_9000255 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_9000255 I
fgenesh1_pm.C_scaffold_14000132 Cochliobolus heterostrophus C5 fgenesh1_pm.C_scaffold_14000132 I
FGRRES_07116 Fusarium graminearum FGRRES_07116 I
FIBRA_06299 Fibroporia radiculosa FIBRA_06299 I
FOMPIDRAFT_1026139 Fomitopsis pinicola FOMPIDRAFT_1026139 I
FOXG_01686 Fusarium oxysporum FOXG_01686 I
FPSE_02664 Fusarium pseudograminearum FPSE_02664 I
G647_10093 Cladophialophora carrionii G647_10093 I
GGTG_01518 Gaeumannomyces graminis GGTG_01518 I
GLRG_01394 Colletotrichum graminicola GLRG_01394 I
GLYMA01G33240 Glycine max GLYMA01G33240 I
GMDG_05273 Pseudogymnoascus destructans GMDG_05273 I
Gorai.006G024900 Gossypium raimondii Gorai.006G024900 I
GSTUM_00011974001 Tuber melanosporum GSTUM_00011974001 I
gw1.30.62.1 Fragilariopsis cylindrus gw1.30.62.1 N
gw1.4.435.1 Cryphonectria parasitica gw1.4.435.1 I
gw1.6.1665.1 Ostreococcus RCC809 gw1.6.1665.1 I
Hba_18326 Heterorhabditis bacteriophora Hba_18326 I
HMPREF1120_00213 Exophiala dermatitidis HMPREF1120_00213 I
HNAJ_0000793101 Hymenolepis nana HNAJ_0000793101 I
L804_02852 Cryptococcus gattii L804_02852 I
LEMA_P064360.1 Leptosphaeria maculans LEMA_P064360.1 I
LjSGA_094514.1 Lotus japonicus LjSGA_094514.1 I
M437DRAFT_15090 Aureobasidium melanogenum M437DRAFT_15090 I
M438DRAFT_338286 Aureobasidium pullulans M438DRAFT_338286 I
M7I_1578 Glarea lozoyensis M7I_1578 I
MAJ_04030 Metarhizium majus MAJ_04030 I
MANI_030028 Metarhizium anisopliae MANI_030028 I
MAPG_06737 Magnaporthe poae MAPG_06737 I
MBM_02410 Marssonina brunnea MBM_02410 I
MBR_01483 Metarhizium brunneum MBR_01483 I
MELLADRAFT_31192 Melampsora laricipopulina MELLADRAFT_31192 I
MELLADRAFT_85039 Melampsora laricipopulina MELLADRAFT_85039 I
mgf001267m Mimulus guttatus mgf001267m I
mgf024995m Mimulus guttatus mgf024995m I
MGG_01641 Magnaporthe oryzae MGG_01641 I
MGU_02157 Metarhizium guizhouense MGU_02157 I
Moror_35 Moniliophthora roreri Moror_35 I
MPER_13045 Moniliophthora perniciosa MPER_13045 I
MPH_08050 Macrophomina phaseolina MPH_08050 I
MTR_5g082570 Medicago truncatula MTR_5g082570 I
MYCTH_2294934 Myceliophthora thermophila MYCTH_2294934 I
NCU02819 Neurospora crassa NCU02819 D
NEUTE1DRAFT_106544 Neurospora tetrasperma NEUTE1DRAFT_106544 I
OCS_01486 Ophiocordyceps sinensis OCS_01486 I
OIDMADRAFT_143526 Oidiodendron maius OIDMADRAFT_143526 I
OSTLU_31946 Ostreococcus lucimarinus OSTLU_31946 I
PGTG_04701 Puccinia graminis PGTG_04701 I
PGTG_10028 Puccinia graminis PGTG_10028 I
PGTG_12120 Puccinia graminis PGTG_12120 I
PHACADRAFT_164552 Phanerochaete carnosa PHACADRAFT_164552 I
Phatr3_EG02634 Phaeodactylum tricornutum Phatr3_EG02634 N
Phatr3_J45662 Phaeodactylum tricornutum Phatr3_J45662 I
PK18077.1 Cannabis sativa PK18077.1 I
PLICRDRAFT_46399 Plicaturopsis crispa PLICRDRAFT_46399 I
PODANS_1_7390 Podospora anserina PODANS_1_7390 I
POPTR_0004s12290 Populus trichocarpa POPTR_0004s12290 I
POPTR_0017s11460 Populus trichocarpa POPTR_0017s11460 I
PTRG_02818 Pyrenophora triticirepentis PTRG_02818 I
PTTG_09594 Puccinia triticina PTTG_09594 I
PTT_17082 Pyrenophora teres PTT_17082 I
PV04_00198 Capronia semiimmersa PV04_00198 I
PV05_09944 Exophiala xenobiotica PV05_09944 I
PV06_04154 Exophiala oligosperma PV06_04154 I
PV07_09313 Cladophialophora immunda PV07_09313 I
PV08_04655 Exophiala spinifera PV08_04655 I
PV09_06887 Verruconis gallopava PV09_06887 I
PV10_01993 Exophiala mesophila PV10_01993 I
PV11_09703 Exophiala sideris PV11_09703 I
RO3G_07543 Rhizopus oryzae RO3G_07543 I
RO3G_09728 Rhizopus oryzae RO3G_09728 I
RPRC006380 Rhodnius prolixus RPRC006380 I
S40288_09735 Stachybotrys chartarum S40288_09735 I
SAPIO_CDS3355 Scedosporium apiospermum SAPIO_CDS3355 I
SapurV1A.0447s0140 Salix purpurea SapurV1A.0447s0140 I
SBOR_0403 Sclerotinia borealis SBOR_0403 I
SELMODRAFT_159743 Selaginella moellendorffii SELMODRAFT_159743 I
SELMODRAFT_166865 Selaginella moellendorffii SELMODRAFT_166865 I
SETTUDRAFT_157792 Setosphaeria turcica SETTUDRAFT_157792 I
SMAC_00615 Sordaria macrospora SMAC_00615 I
SNOG_03674 Stagonospora nodorum SNOG_03674 I
SNOG_03674 Phaeosphaeria nodorum SNOG_03674 I
SPBR_04745 Sporothrix brasiliensis SPBR_04745 I
SS1G_04584 Sclerotinia sclerotiorum SS1G_04584 I
THITE_2121767 Thielavia terrestris THITE_2121767 I
TRIATDRAFT_321166 Trichoderma atroviride TRIATDRAFT_321166 I
TRIVIDRAFT_228694 Trichoderma virens TRIVIDRAFT_228694 I
TVAG_125540 Trichomonas vaginalis TVAG_125540 I
V499_08602 Pseudogymnoascus pannorum V499_08602 I
VDAG_04140 Verticillium dahliae VDAG_04140 I
VDAG_09161 Verticillium dahliae VDAG_09161 I
VDBG_04589 Verticillium albo atrum VDBG_04589 I
VDBG_04589 Verticillium alfalfae VDBG_04589 I
VHEMI10573 Torrubiella hemipterigena VHEMI10573 I
W97_04202 Coniosporium apollinis W97_04202 I
X797_001988 Metarhizium robertsii X797_001988 I
Z517_02317 Fonsecaea pedrosoi Z517_02317 I
Z518_04911 Rhinocladiella mackenziei Z518_04911 I
Z519_04692 Cladophialophora bantiana Z519_04692 I