CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_pg.scaffold_72000050
(
Branchiostoma floridae
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
fgenesh2_pg.scaffold_72000050
T227550_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_pg.scaffold_72000050
Homeodomain
85
132
RRFMVKWPSAATVILERFFQMDKNPTENQREEIARVCNDELQKAALSI
Links
Other
Homeodomain
family TFs
Other
Branchiostoma floridae
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.543.8.1
Branchiostoma floridae
e_gw.543.8.1
N
0.773
e_gw.85.119.1
Branchiostoma floridae
e_gw.85.119.1
N
0.680
e_gw.543.9.1
Branchiostoma floridae
e_gw.543.9.1
N
0.678
JAAARDRAFT_44906
Jaapia argillacea
JAAARDRAFT_44906
N
0.630
YQE_11906
Dendroctonus ponderosae
YQE_11906
N
0.626
D918_02763
Trichuris suis
D918_02763
N
0.606