CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Bostr.12302s0137
(
Boechera stricta
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
Bostr.12302s0137
T228083_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA
TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.761
0.714
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW
WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.761
0.714
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.12302s0137.1.p
Homeodomain
87
147
GTRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITSQLGKYGKIEGKNVFYWFQNHKARERQ
Links
Other
Homeodomain
family TFs
Other
Boechera stricta
TFs
442 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy