CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_80.16
(
Carica papaya
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
evm.TU.supercontig_80.16
T228570_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_80.16
Homeodomain
18
55
LVGLAERFSESADRKGKIAVQFKQVWNWFQNRRYAIRA
Links
Other
Homeodomain
family TFs
Other
Carica papaya
TFs
78 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
estExt_gwp_gw1.C_550163
Physcomitrella patens
estExt_gwp_gw1.C_550163
D
SELMODRAFT_69413
Selaginella moellendorffii
SELMODRAFT_69413
I
gw1.15.199.1
Physcomitrella patens
gw1.15.199.1
I
gw1.276.83.1
Physcomitrella patens
gw1.276.83.1
I
SELMODRAFT_73147
Selaginella moellendorffii
SELMODRAFT_73147
N
SELMODRAFT_73148
Selaginella moellendorffii
SELMODRAFT_73148
N