orange1.1g046372m.g (Citrus sinensis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 orange1.1g046372m.g T229191_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
WUS
M06905_2.00
Arabidopsis thaliana
TRAWTGAWTGA

TCAWTCAWTYA
Dap-seq
OMalley et al.(2016)
WUS1_col_a
0.790 0.842
WUS
M06906_2.00
Arabidopsis thaliana
TGAWTGAWTGW

WCAWTCAWTCA
Dap-seq
OMalley et al.(2016)
WUS1_colamp_a
0.790 0.842
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g046372m Homeodomain 30 92

Links

Other Homeodomain family TFs
Other Citrus sinensis TFs

Invalid Input OrderBy

464 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action