Pavir.Ea02883 (Panicum virgatum)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 Pavir.Ea02883 T229244_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ea02883.1.p Homeodomain 763 814

Links

Other Homeodomain family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_30301 Aegilops tauschii F775_30301 N 0.633
Traes_3DL_DD2F7201D Triticum aestivum Traes_3DL_DD2F7201D N 0.633
BGIOSGA022583 Oryza indica BGIOSGA022583 N 0.631
OBART06G08210 Oryza barthii OBART06G08210 N 0.631
OGLUM06G08790 Oryza glumaepatula OGLUM06G08790 N 0.631
OLONG_012955 Oryza longistaminata OLONG_012955 N 0.631
OMERI06G09800 Oryza meridionalis OMERI06G09800 N 0.631
ONIVA06G09490 Oryza nivara ONIVA06G09490 N 0.631
OPUNC06G07980 Oryza punctata OPUNC06G07980 N 0.631
ORGLA06G0078200 Oryza glaberrima ORGLA06G0078200 N 0.631
ORUFI06G08550 Oryza rufipogon ORUFI06G08550 N 0.631
HAZ1 Oryza sativa OS06G0229300 N 0.631
TRIUR3_12195 Triticum urartu TRIUR3_12195 N 0.621
LPERR01G26350 Leersia perrieri LPERR01G26350 N 0.615
OB01G10540 Oryza brachyantha OB01G10540 N 0.615
BRADI2G49760 Brachypodium distachyon BRADI2G49760 N 0.602
LPERR02G12330 Leersia perrieri LPERR02G12330 N 0.599