CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SapurV1A.0118s0340
(
Salix purpurea
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
SapurV1A.0118s0340
T229424_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SapurV1A.0118s0340.1.p
Homeodomain
18
74
KPRKKRLDRDQHRLLETSFNANQKLKAEDKIKLARQLGLPPRQVEIWYQNRRAKNKN
Links
Other
Homeodomain
family TFs
Other
Salix purpurea
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
POPTR_0007s01370
Populus trichocarpa
POPTR_0007s01370
I
0.738
POPTR_0017s04820
Populus trichocarpa
POPTR_0017s04820
I
0.694
SapurV1A.2554s0010
Salix purpurea
SapurV1A.2554s0010
I
0.694
SapurV1A.3101s0010
Salix purpurea
SapurV1A.3101s0010
I
0.690
29983.m003123
Ricinus communis
29983.m003123
I
0.664
PGSC0003DMG402012439
Solanum tuberosum
PGSC0003DMG402012439
I
0.619
Solyc07g062790.1
Solanum lycopersicum
Solyc07g062790.1
I
0.616
VIT_10s0003g00380
Vitis vinifera
VIT_10s0003g00380
I
0.609
PGSC0003DMG400031777
Solanum tuberosum
PGSC0003DMG400031777
I
0.607
Solyc02g077590.1
Solanum lycopersicum
Solyc02g077590.1
I
0.607
TCM_031644
Theobroma cacao
TCM_031644
I
0.603
Gorai.002G067100
Gossypium raimondii
Gorai.002G067100
I
0.603
Lus10003492.g
Linum usitatissimum
Lus10003492.g
I
0.600
Lus10013103.g
Linum usitatissimum
Lus10013103.g
I
0.600