CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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LDEC006593
(
Leptinotarsa decemlineata
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
LDEC006593
T230006_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Pbx1
M09213_2.00
Mus musculus
TGABTGRCRGV
BCYGYCAVTCA
Misc
Kulakovskiy et al.(2013)
PBX1_MOUSE.H11MO.0.A
0.723
0.872
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
LDEC006593-PA
Homeodomain
106
155
RRKRRNFSKQASEILNEYFYSHLSNPYPSEEAKEELARKCGITVSQVKLF
Links
Other
Homeodomain
family TFs
Other
Leptinotarsa decemlineata
TFs
29 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSGMOG00000006428
Gadus morhua
ENSGMOG00000006428
I
0.755
PBX3
Tupaia belangeri
ENSTBEG00000016855
I
0.755
MESCA000707
Megaselia scalaris
MESCA000707
I
0.748
MDOA002143
Musca domestica
MDOA002143
I
0.748
PPAI000859
Phlebotomus papatasi
PPAI000859
I
0.748
CABZ01017151.1
Danio rerio
ENSDARG00000104156
I
0.723
PBX1
Homo sapiens
ENSG00000185630
D
0.723
ENSLACG00000016442
Latimeria chalumnae
ENSLACG00000016442
I
0.723
ENSLOCG00000006841
Lepisosteus oculatus
ENSLOCG00000006841
I
0.723
ENSMEUG00000006330
Macropus eugenii
ENSMEUG00000006330
I
0.723
Pbx1
Mus musculus
ENSMUSG00000052534
D
0.723
PBX1
Oryzias latipes
ENSORLG00000016702
I
0.723
ENSACAG00000003721
Anolis carolinensis
ENSACAG00000003721
I
0.722
ENSSTOG00000013679
Ictidomys tridecemlineatus
ENSSTOG00000013679
I
0.722
Ogr15448
Ophisaurus gracilis
Ogr15448
I
0.722
A_00975
Schistosoma haematobium
A_00975
I
0.719
D915_05491
Fasciola hepatica
D915_05491
I
0.719
ENSMEUG00000002971
Macropus eugenii
ENSMEUG00000002971
I
0.717
Brh_R010078
Buceros rhinoceros
Brh_R010078
I
0.717
PBX4
Oryctolagus cuniculus
ENSOCUG00000029208
I
0.716
SVUK_0000462001
Strongylus vulgaris
SVUK_0000462001
I
0.710
AEPI008243
Anopheles epiroticus
AEPI008243
I
0.676
ANCDUO_01775
Ancylostoma duodenale
ANCDUO_01775
I
0.652
TELCIR_02026
Teladorsagia circumcincta
TELCIR_02026
I
0.647
ACOC_0000393801
Angiostrongylus costaricensis
ACOC_0000393801
I
0.635
MhA1_Contig138.frz3.gene24
Meloidogyne hapla
MhA1_Contig138.frz3.gene24
I
0.609
CBG26065
Caenorhabditis briggsae
CBG26065
I
0.601
HmN_000400100
Hymenolepis microstoma
HmN_000400100
I
0.600
SVUK_0001050601
Strongylus vulgaris
SVUK_0001050601
I
0.600