CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ventx1.2.S
(
Xenopus laevis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
XB-GENE-920881
T230722_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ventx1.2.S
M10805_2.00
Xenopus laevis
RSRMAAATWBBVS
SBBBWATTTKYSY
Transfac
Matys et al.(2006)
V$XVENT1_01
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ventx1.1.L
M02234_2.00
Xenopus laevis
NNNNVBNNNN
NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH6162
0.832
0.947
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK
MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.790
0.526
Evx2
M00393_2.00
Mus musculus
NNTAAYNN
NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.785
0.544
Evx1
M00395_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.785
0.544
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN
NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.785
0.544
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN
NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.785
0.544
EVX1
M04985_2.00
Homo sapiens
VTAATKAB
VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.785
0.544
EVX2
M05295_2.00
Homo sapiens
NTAATKAN
NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.785
0.544
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN
NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.785
0.544
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN
NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.785
0.544
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN
NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.785
0.544
EVX2
M10736_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.785
0.544
EVX1
M04986_2.00
Homo sapiens
NTMATKAN
NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.785
0.544
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB
VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.785
0.544
EVX2
M05296_2.00
Homo sapiens
NTAATKAN
NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.785
0.544
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.785
0.544
pb
M03872_2.00
Drosophila melanogaster
NTRAYKRY
RYMRTYAN
SELEX
Nitta et al.(2015)
pb_1
0.756
0.579
pb
M06545_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0238.1
0.756
0.579
pb
M06366_2.00
Drosophila melanogaster
BYTAATKA
TMATTARV
B1H
Zhu et al.(2011)
Pb_Cell_FBgn0051481
0.756
0.579
pb
M06367_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Pb_SOLEXA_FBgn0051481
0.756
0.579
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN
NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.748
0.544
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV
BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.748
0.544
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN
NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.748
0.544
Meox2
M03271_2.00
Mus musculus
NTAATKAN
NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.748
0.544
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB
VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.748
0.544
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV
BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.748
0.544
Meox2
M10771_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.748
0.544
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.748
0.544
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN
NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.748
0.544
Mnx1
M00388_2.00
Mus musculus
NTAATBDNNN
NNNHVATTAN
PBM
Berger et al.(2008)
Hlxb9_3422
0.748
0.614
MNX1
M03143_2.00
Homo sapiens
NHTAATTRNH
DNYAATTADN
SELEX
Jolma et al.(2013)
MNX1_1
0.748
0.614
MNX1
M05126_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX
0.748
0.614
MNX1
M05127_2.00
Homo sapiens
HTAAYGHB
VDCRTTAD
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1
0.748
0.614
MNX1
M05128_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2
0.748
0.614
eve
M00556_2.00
Drosophila melanogaster
NNTAATTARN
NYTAATTANN
PBM
Busser et al.(2012a)
Eve
0.745
0.544
eve
M02115_2.00
Drosophila melanogaster
NTAATNDNN
NNHNATTAN
PBM
Weirauch et al.(2014)
pTH6436
0.745
0.544
eve
M03794_2.00
Drosophila melanogaster
VYTAATKASN
NSTMATTARB
SELEX
Nitta et al.(2015)
eve_1
0.745
0.544
eve
M06486_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0221.1
0.745
0.544
eve
M06240_2.00
Drosophila melanogaster
DYTAATKA
TMATTARH
B1H
Zhu et al.(2011)
Eve_Cell_FBgn0000606
0.745
0.544
eve
M06241_2.00
Drosophila melanogaster
HKBTAAYNDTKY
RMAHNRTTAVMD
B1H
Zhu et al.(2011)
eve_FlyReg_FBgn0000606
0.745
0.544
eve
M06242_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Eve_SOLEXA_FBgn0000606
0.745
0.544
eve
M09678_2.00
Drosophila melanogaster
NKHTAATKD
HMATTADMN
Misc
Kulakovskiy et al.(2009)
eve
0.745
0.544
eve
M10786_2.00
Drosophila melanogaster
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$EVE_Q6
0.745
0.544
HOXA2
M02083_2.00
Homo sapiens
NNNDHHNNN
NNNDDHNNN
PBM
Weirauch et al.(2014)
pTH5887
0.744
0.561
Hoxa2
M00403_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa2_3079
0.744
0.561
HOXA2
M03097_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXA2_1
0.744
0.561
HOXB2
M03213_2.00
Homo sapiens
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
HOXB2_1
0.744
0.561
Hoxa2
M03251_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxa2_1
0.744
0.561
HOXA2
M04962_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_HT-SELEX
0.744
0.561
HOXA2
M04965_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_HT-SELEX
0.744
0.561
HOXB2
M05292_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXB2_eDBD_HT-SELEX
0.744
0.561
Hoxa2
M09566_2.00
Mus musculus
DTGATKGATKDB
VHMATCMATCAH
Misc
Heinz et al.(2010)
mES-Hoxa2_Donaldson_et_al.
0.744
0.561
HOXA2
M04963_2.00
Homo sapiens
NTAATTAN
NTAATTAN
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_1
0.744
0.561
HOXA2
M04964_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_eDBD_Methyl-HT-SELEX_2
0.744
0.561
HOXA2
M04966_2.00
Homo sapiens
NTAATKAB
VTMATTAN
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_1
0.744
0.561
HOXA2
M04967_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXA2_FL_Methyl-HT-SELEX_2
0.744
0.561
HOXB2
M05293_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_1
0.744
0.561
HOXB2
M05294_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
HOXB2_eDBD_Methyl-HT-SELEX_2
0.744
0.561
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN
NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.741
0.509
exex
M03871_2.00
Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN
SELEX
Nitta et al.(2015)
exex_1
0.736
0.596
exex
M06544_2.00
Drosophila melanogaster
BTAATTA
TAATTAV
B1H
Mathelier et al.(2014)
MA0224.1
0.736
0.596
exex
M06364_2.00
Drosophila melanogaster
TAATTAV
BTAATTA
B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156
0.736
0.596
exex
M06365_2.00
Drosophila melanogaster
TAATBR
YVATTA
B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156
0.736
0.596
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN
NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.732
0.526
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN
NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.732
0.526
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA
TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.732
0.526
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA
TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.732
0.526
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY
RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.732
0.526
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR
YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.732
0.526
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB
VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.732
0.526
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN
NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.732
0.526
VENTX
M02091_2.00
Homo sapiens
TTAATTAB
VTAATTAA
PBM
Weirauch et al.(2014)
pTH5490
0.723
0.596
VENTX
M00305_2.00
Homo sapiens
DTAATTRR
YYAATTAH
PBM
Barrera et al.(2016)
VENTX_REF
0.723
0.596
VENTX
M03169_2.00
Homo sapiens
YTAATBGNT
ANCVATTAR
SELEX
Jolma et al.(2013)
VENTX_1
0.723
0.596
VENTX
M03170_2.00
Homo sapiens
VSYTAATSGRWAAMCGATTAG
CTAATCGKTTWYCSATTARSB
SELEX
Jolma et al.(2013)
VENTX_2
0.723
0.596
VENTX
M05188_2.00
Homo sapiens
CGHTAATBG
CVATTADCG
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_1
0.723
0.596
VENTX
M05189_2.00
Homo sapiens
VNTAATBRNN
NNYVATTANB
SELEX
Yin et al.(2017)
VENTX_FL_HT-SELEX_2
0.723
0.596
VENTX
M00303_2.00
Homo sapiens
NVTAATTANNN
NNNTAATTABN
PBM
Barrera et al.(2016)
VENTX_E101K
0.723
0.596
VENTX
M05190_2.00
Homo sapiens
VHTAATKRNN
NNYMATTADB
SELEX
Yin et al.(2017)
VENTX_FL_Methyl-HT-SELEX
0.723
0.596
VENTX
M00304_2.00
Homo sapiens
NATAYATAB
VTATRTATN
PBM
Barrera et al.(2016)
VENTX_R143C
0.723
0.579
ventx3.2
M02232_2.00
Xenopus tropicalis
ATTAATTA
TAATTAAT
PBM
Weirauch et al.(2014)
pTH6291
0.709
0.544
Barx1
M00413_2.00
Mus musculus
NNTAAYBDNN
NNHVRTTANN
PBM
Berger et al.(2008)
Barx1_2877
0.705
0.596
barx1
M02107_2.00
Tetraodon nigroviridis
NTAAYNNNN
NNNNRTTAN
PBM
Weirauch et al.(2014)
pTH6449
0.705
0.596
BARX1
M03144_2.00
Homo sapiens
TAATBGNWWWTTAATBR
YVATTAAWWWNCVATTA
SELEX
Jolma et al.(2013)
BARX1_1
0.705
0.596
BARX1
M03145_2.00
Homo sapiens
NTAATBRN
NYVATTAN
SELEX
Jolma et al.(2013)
BARX1_2
0.705
0.596
Barx1
M09181_2.00
Mus musculus
NNWAAKKGYTWH
DWARCMMTTWNN
Misc
Kulakovskiy et al.(2013)
BARX1_MOUSE.H11MO.0.C
0.705
0.596
Barx2
M00457_2.00
Mus musculus
NTAABNDNN
NNHNVTTAN
PBM
Berger et al.(2008)
Barx2_3447
0.705
0.579
BARX2
M04915_2.00
Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_HT-SELEX
0.705
0.579
BARX2
M04916_2.00
Homo sapiens
NTAAYKRTTWWN
NWWAAYMRTTAN
SELEX
Yin et al.(2017)
BARX2_FL_Methyl-HT-SELEX
0.705
0.579
Meox1
M00384_2.00
Mus musculus
NTRATKRNN
NNYMATYAN
PBM
Berger et al.(2008)
Meox1_2310
0.704
0.544
MEOX1
M03077_2.00
Homo sapiens
NNTAATTASN
NSTAATTANN
SELEX
Jolma et al.(2013)
MEOX1_1
0.704
0.544
MEOX1
M04901_2.00
Homo sapiens
NTDAYGHB
VDCRTHAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1
0.704
0.544
MEOX1
M04902_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2
0.704
0.544
MEOX1
M04903_2.00
Homo sapiens
NTAAYGWB
VWCRTTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1
0.704
0.544
MEOX1
M04904_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2
0.704
0.544
btn
M03832_2.00
Drosophila melanogaster
NNTAATKANB
VNTMATTANN
SELEX
Nitta et al.(2015)
btn_1
0.704
0.509
btn
M03833_2.00
Drosophila melanogaster
VNTAATKABN
NVTMATTANB
SELEX
Nitta et al.(2015)
btn_2
0.704
0.509
btn
M06515_2.00
Drosophila melanogaster
DTAATKA
TMATTAH
B1H
Mathelier et al.(2014)
MA0215.1
0.704
0.509
btn
M06307_2.00
Drosophila melanogaster
NDTAATKA
TMATTAHN
B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949
0.704
0.509
btn
M06308_2.00
Drosophila melanogaster
HTAATKA
TMATTAD
B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949
0.704
0.509
HOXC4
M00330_2.00
Homo sapiens
YTAATTRB
VYAATTAR
PBM
Barrera et al.(2016)
HOXC4_REF
0.699
0.544
Hoxc4
M00530_2.00
Mus musculus
NWAATNDNN
NNHNATTWN
PBM
Berger et al.(2008)
Hoxc4_3491
0.699
0.544
HOXC4
M05385_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_HT-SELEX
0.699
0.544
HOXC4
M00328_2.00
Homo sapiens
YTAATTAB
VTAATTAR
PBM
Barrera et al.(2016)
HOXC4_N178S
0.699
0.544
HOXC4
M05386_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_1
0.699
0.544
HOXC4
M05387_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXC4_FL_Methyl-HT-SELEX_2
0.699
0.544
Bsx
M00516_2.00
Mus musculus
NTAAYBDNN
NNHVRTTAN
PBM
Berger et al.(2008)
Bsx_3483
0.697
0.632
bsh
M02113_2.00
Drosophila melanogaster
NNTAAYBDNN
NNHVRTTANN
PBM
Weirauch et al.(2014)
pTH6569
0.697
0.632
BSX
M03235_2.00
Homo sapiens
NTAATBRN
NYVATTAN
SELEX
Jolma et al.(2013)
BSX_1
0.697
0.632
bsh
M03786_2.00
Drosophila melanogaster
TAATYTAATTA
TAATTARATTA
SELEX
Nitta et al.(2015)
bsh_1
0.697
0.632
bsh
M03787_2.00
Drosophila melanogaster
TAATTRVWTAATKR
YMATTAWBYAATTA
SELEX
Nitta et al.(2015)
bsh_2
0.697
0.632
bsh
M03788_2.00
Drosophila melanogaster
NTAATBRN
NYVATTAN
SELEX
Nitta et al.(2015)
bsh_3
0.697
0.632
BSX
M05377_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_1
0.697
0.632
BSX
M05378_2.00
Homo sapiens
BTAATBRV
BYVATTAV
SELEX
Yin et al.(2017)
BSX_eDBD_HT-SELEX_2
0.697
0.632
bsh
M06483_2.00
Drosophila melanogaster
YTAATBR
YVATTAR
B1H
Mathelier et al.(2014)
MA0214.1
0.697
0.632
bsh
M06231_2.00
Drosophila melanogaster
HYTAATBRV
BYVATTARD
B1H
Zhu et al.(2011)
Bsh_Cell_FBgn0000529
0.697
0.632
bsh
M06232_2.00
Drosophila melanogaster
NTAATKR
YMATTAN
B1H
Zhu et al.(2011)
Bsh_SOLEXA_FBgn0000529
0.697
0.632
BSX
M05379_2.00
Homo sapiens
NTAAYGHB
VDCRTTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_1
0.697
0.632
BSX
M05380_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
BSX_eDBD_Methyl-HT-SELEX_2
0.697
0.632
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN
NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.697
0.491
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS
STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.697
0.491
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV
BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.697
0.491
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.697
0.491
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA
TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.697
0.491
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN
NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.697
0.491
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.697
0.491
lin-39
M08211_2.00
Caenorhabditis elegans
GATTGATG
CATCAATC
ChIP-seq
Contrino et al.(2012)
Mw154
0.694
0.509
lin-39
M09582_2.00
Caenorhabditis elegans
DTGATWRATK
MATYWATCAH
Misc
Heinz et al.(2010)
cElegans.L3-LIN39_modEncode
0.694
0.509
HESX1
M00309_2.00
Homo sapiens
HTAATTRGN
NCYAATTAD
PBM
Barrera et al.(2016)
HESX1_REF
0.692
0.526
HESX1
M00307_2.00
Homo sapiens
TAATTRNN
NNYAATTA
PBM
Barrera et al.(2016)
HESX1_N125S
0.692
0.526
P79681_ACIBE
M02200_2.00
Acipenser baerii
DTAATTRB
VYAATTAH
PBM
Weirauch et al.(2014)
pTH6156
0.692
0.509
HESX1
M00308_2.00
Homo sapiens
NATAHATRN
NYATDTATN
PBM
Barrera et al.(2016)
HESX1_R160C
0.692
0.509
Hoxa4
M00383_2.00
Mus musculus
NTAATBDNN
NNHVATTAN
PBM
Berger et al.(2008)
Hoxa4_3426
0.687
0.544
HOXA4
M05381_2.00
Homo sapiens
NTAATKRY
RYMATTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_HT-SELEX
0.687
0.544
HOXA4
M10755_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA4_Q2
0.687
0.544
HOXA4
M05382_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA4_eDBD_Methyl-HT-SELEX
0.687
0.544
Hoxb4
M00479_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxb4_2627
0.687
0.526
Hoxb3
M00504_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxb3_1720
0.687
0.526
HOXB3
M03126_2.00
Homo sapiens
NBTAATKRNN
NNYMATTAVN
SELEX
Jolma et al.(2013)
HOXB3_1
0.687
0.526
HOXB4
M05343_2.00
Homo sapiens
YTAATKAY
RTMATTAR
SELEX
Yin et al.(2017)
HOXB4_FL_HT-SELEX
0.687
0.526
HOXD4
M05273_2.00
Homo sapiens
NTMATKRV
BYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_HT-SELEX
0.687
0.526
HOXD4
M05276_2.00
Homo sapiens
NTAATKRB
VYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_HT-SELEX
0.687
0.526
HOXB4
M09162_2.00
Homo sapiens
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_HUMAN.H11MO.0.B
0.687
0.526
Hoxb4
M09204_2.00
Mus musculus
YTAATKRS
SYMATTAR
Misc
Kulakovskiy et al.(2013)
HXB4_MOUSE.H11MO.0.A
0.687
0.526
Hoxb4
M09576_2.00
Mus musculus
TGATDRATKRSN
NSYMATYHATCA
Misc
Heinz et al.(2010)
ES-Hoxb4_GSE34014
0.687
0.526
HOXB4
M05344_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_1
0.687
0.526
HOXB4
M05345_2.00
Homo sapiens
HTAAYKAB
VTMRTTAD
SELEX
Yin et al.(2017)
HOXB4_FL_Methyl-HT-SELEX_2
0.687
0.526
HOXD4
M05274_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_1
0.687
0.526
HOXD4
M05275_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_eDBD_Methyl-HT-SELEX_2
0.687
0.526
HOXD4
M05277_2.00
Homo sapiens
NTAATKRN
NYMATTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_1
0.687
0.526
HOXD4
M05278_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXD4_FL_Methyl-HT-SELEX_2
0.687
0.526
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN
NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.687
0.509
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN
NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.687
0.509
Hoxd3
M00531_2.00
Mus musculus
NTAATNDN
NHNATTAN
PBM
Berger et al.(2008)
Hoxd3_1742
0.687
0.509
Hoxa3
M00172_2.00
Mus musculus
NTAATKRNNN
NNNYMATTAN
PBM
Badis et al.(2009)
Hoxa3_2783
0.687
0.509
Hoxa3
M00532_2.00
Mus musculus
NTAATKRNN
NNYMATTAN
PBM
Berger et al.(2008)
Hoxa3_2783
0.687
0.509
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN
NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.687
0.509
Hoxd3
M03287_2.00
Mus musculus
NNTAATKRNN
NNYMATTANN
SELEX
Jolma et al.(2013)
Hoxd3_1
0.687
0.509
HOXA5
M04968_2.00
Homo sapiens
STAATKRS
SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.687
0.509
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB
VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.687
0.509
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV
BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.687
0.509
HOXB5
M05054_2.00
Homo sapiens
STMATKAB
VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.687
0.509
HOXD3
M05101_2.00
Homo sapiens
CTAATTAS
STAATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_HT-SELEX
0.687
0.509
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR
YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.687
0.509
HOXA3
M10651_2.00
Homo sapiens
SVTWNDDKB
VMHHNWABS
Transfac
Matys et al.(2006)
V$HOXA3_01
0.687
0.509
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK
MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.687
0.509
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV
BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.687
0.509
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.687
0.509
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.687
0.509
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.687
0.509
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN
NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.687
0.509
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY
RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.687
0.509
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB
VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.687
0.509
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY
RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.687
0.509
HOXD3
M05102_2.00
Homo sapiens
YTAAYGAY
RTCRTTAR
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_1
0.687
0.509
HOXD3
M05103_2.00
Homo sapiens
CTAATKAC
GTMATTAG
SELEX
Yin et al.(2017)
HOXD3_FL_Methyl-HT-SELEX_2
0.687
0.509
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN
NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.687
0.474
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB
VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.687
0.474
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN
NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.687
0.474
PDX1
M03156_2.00
Homo sapiens
BTAATKRN
NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.687
0.474
PDX1
M05161_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.687
0.474
PDX1
M09147_2.00
Homo sapiens
TGATWGATK
MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.687
0.474
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB
VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.687
0.474
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR
YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.687
0.474
PDX1
M10699_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.687
0.474
PDX1
M10700_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.687
0.474
PDX1
M10701_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.687
0.474
PDX1
M10702_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.687
0.474
PDX1
M10703_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.687
0.474
PDX1
M10704_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.687
0.474
PDX1
M10705_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.687
0.474
PDX1
M10706_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.687
0.474
PDX1
M10707_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.687
0.474
PDX1
M10708_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.687
0.474
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.687
0.474
PDX1
M05163_2.00
Homo sapiens
YTAATKRB
VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.687
0.474
zen
M03805_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
zen_1
0.682
0.509
zen
M06500_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0256.1
0.682
0.509
zen
M06276_2.00
Drosophila melanogaster
NBYTAATKA
TMATTARBN
B1H
Zhu et al.(2011)
Zen_Cell_FBgn0004053
0.682
0.509
zen
M06277_2.00
Drosophila melanogaster
AANWTWAWTG
CAWTWAWNTT
B1H
Zhu et al.(2011)
zen_FlyReg_FBgn0004053
0.682
0.509
zen
M06278_2.00
Drosophila melanogaster
NYTAATKA
TMATTARN
B1H
Zhu et al.(2011)
Zen_SOLEXA_FBgn0004053
0.682
0.509
Q9BJW6_9CNID
M02215_2.00
Sarsia sp. Long Island Sound
NBTAATTAVN
NBTAATTAVN
PBM
Weirauch et al.(2014)
pTH6287
0.682
0.509
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV
BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.680
0.526
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR
YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.680
0.526
lms
M06536_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.680
0.526
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR
YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.680
0.526
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN
NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.680
0.526
lms
M06349_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.680
0.526
ceh-62
M02187_2.00
Caenorhabditis elegans
NNYAATTRNN
NNYAATTRNN
PBM
Weirauch et al.(2014)
pTH5492
0.677
0.544
Q0N4M8_NEMVE
M02166_2.00
Nematostella vectensis
HTAATKAC
GTMATTAD
PBM
Weirauch et al.(2014)
pTH6215
0.676
0.474
Hoxc5
M00422_2.00
Mus musculus
NWRATND
HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.674
0.474
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB
VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.674
0.474
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.674
0.474
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA
TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.674
0.474
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.674
0.474
unpg
M03836_2.00
Drosophila melanogaster
SSTAATYRVN
NBYRATTASS
SELEX
Nitta et al.(2015)
unpg_1
0.672
0.596
unpg
M06517_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Mathelier et al.(2014)
MA0251.1
0.672
0.596
unpg
M06311_2.00
Drosophila melanogaster
NBTAATTR
YAATTAVN
B1H
Zhu et al.(2011)
Unpg_Cell_FBgn0015561
0.672
0.596
unpg
M06312_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
Unpg_SOLEXA_FBgn0015561
0.672
0.596
HESX1
M00306_2.00
Homo sapiens
WRATDRNN
NNYHATYW
PBM
Barrera et al.(2016)
HESX1_E149K
0.672
0.509
HOXC4
M00329_2.00
Homo sapiens
NTAATKRNN
NNYMATTAN
PBM
Barrera et al.(2016)
HOXC4_R158L
0.667
0.526
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN
NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.663
0.561
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN
NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.663
0.561
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG
CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.663
0.561
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV
BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.663
0.561
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN
NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.663
0.561
Gbx2
M00462_2.00
Mus musculus
NNDAHNN
NNDTHNN
PBM
Berger et al.(2008)
Gbx2_3110
0.660
0.561
Gbx1
M00525_2.00
Mus musculus
NNTAATNR
YNATTANN
PBM
Berger et al.(2008)
Gbx1_2883
0.660
0.561
GBX1
M03193_2.00
Homo sapiens
NBTAATTRSB
VSYAATTAVN
SELEX
Jolma et al.(2013)
GBX1_1
0.660
0.561
GBX2
M03201_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_1
0.660
0.561
GBX2
M03202_2.00
Homo sapiens
TAATTRVBCAATWA
TWATTGVBYAATTA
SELEX
Jolma et al.(2013)
GBX2_2
0.660
0.561
GBX2
M03203_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
GBX2_3
0.660
0.561
Gbx1
M03286_2.00
Mus musculus
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx1_1
0.660
0.561
Gbx2
M03268_2.00
Mus musculus
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
Gbx2_1
0.660
0.561
GBX2
M05265_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_HT-SELEX
0.660
0.561
GBX2
M05268_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_HT-SELEX
0.660
0.561
GBX2
M05266_2.00
Homo sapiens
HTAAYGAB
VTCRTTAD
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_1
0.660
0.561
GBX2
M05267_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
GBX2_eDBD_Methyl-HT-SELEX_2
0.660
0.561
GBX2
M05269_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_1
0.660
0.561
GBX2
M05270_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
GBX2_FL_Methyl-HT-SELEX_2
0.660
0.561
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN
NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.659
0.579
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN
NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.659
0.579
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN
NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.659
0.579
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB
VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.659
0.579
slou
M06494_2.00
Drosophila melanogaster
YTAATKR
YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.659
0.579
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR
YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.659
0.579
slou
M06263_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.659
0.579
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN
NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.653
0.614
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN
NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.653
0.614
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR
YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.653
0.614
EMX1
M05145_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.653
0.614
EMX1
M05147_2.00
Homo sapiens
BTAATTAV
BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.653
0.614
EMX1
M05146_2.00
Homo sapiens
BTAATTRN
NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.653
0.614
EMX1
M05148_2.00
Homo sapiens
BTAATTAN
NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.653
0.614
Emx2
M00495_2.00
Mus musculus
NTAATDDNN
NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.653
0.596
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN
NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.653
0.596
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR
YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.653
0.596
EMX2
M05281_2.00
Homo sapiens
YTAATKAB
VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.653
0.596
EMX2
M05282_2.00
Homo sapiens
YTAATKAN
NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.653
0.596
lbl
M00561_2.00
Drosophila melanogaster
NTAAYDRGN
NCYHRTTAN
PBM
Busser et al.(2012a)
Lbl
0.653
0.579
lbl
M03815_2.00
Drosophila melanogaster
NTAAYKRG
CYMRTTAN
SELEX
Nitta et al.(2015)
lbl_1
0.653
0.579
lbl
M03816_2.00
Drosophila melanogaster
NTAAYRAGN
NCTYRTTAN
SELEX
Nitta et al.(2015)
lbl_2
0.653
0.579
lbl
M06508_2.00
Drosophila melanogaster
TAATKR
YMATTA
B1H
Mathelier et al.(2014)
MA0232.1
0.653
0.579
lbl
M06295_2.00
Drosophila melanogaster
VHTAATKR
YMATTADB
B1H
Zhu et al.(2011)
Lbl_Cell_FBgn0008651
0.653
0.579
lbl
M06296_2.00
Drosophila melanogaster
NHTAAYBA
TVRTTADN
B1H
Zhu et al.(2011)
Lbl_SOLEXA_FBgn0008651
0.653
0.579
LBX1
M02090_2.00
Homo sapiens
NTAAYTRG
CYARTTAN
PBM
Weirauch et al.(2014)
pTH6404
0.653
0.544
ro
M06495_2.00
Drosophila melanogaster
YTAATTA
TAATTAR
B1H
Mathelier et al.(2014)
MA0241.1
0.651
0.474
ro
M06264_2.00
Drosophila melanogaster
NYTAATTA
TAATTARN
B1H
Zhu et al.(2011)
Ro_Cell_FBgn0003267
0.651
0.474
ro
M06265_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
Ro_SOLEXA_FBgn0003267
0.651
0.474
Hoxa1
M00450_2.00
Mus musculus
NHRATKRNN
NNYMATYDN
PBM
Berger et al.(2008)
Hoxa1_3425
0.651
0.509
HOXA1
M03096_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
HOXA1_1
0.651
0.509
HOXA1
M04959_2.00
Homo sapiens
NTMATKAN
NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_HT-SELEX
0.651
0.509
HOXA1
M09133_2.00
Homo sapiens
NKGATGGATG
CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_HUMAN.H11MO.0.C
0.651
0.509
Hoxa1
M09196_2.00
Mus musculus
NKGATGGATG
CATCCATCMN
Misc
Kulakovskiy et al.(2013)
HXA1_MOUSE.H11MO.0.C
0.651
0.509
HOXA1
M04960_2.00
Homo sapiens
NTMATKAN
NTMATKAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_1
0.651
0.509
HOXA1
M04961_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
HOXA1_FL_Methyl-HT-SELEX_2
0.651
0.509
SNAPOd2T00006620001
M02231_2.00
Oikopleura dioica
NTAATTRN
NYAATTAN
PBM
Weirauch et al.(2014)
pTH5666
0.649
0.474
lbe
M03822_2.00
Drosophila melanogaster
TAACRABV
BVTYGTTA
SELEX
Nitta et al.(2015)
lbe_1
0.648
0.561
lbe
M03823_2.00
Drosophila melanogaster
BTVAKBRV
BYVMTBAV
SELEX
Nitta et al.(2015)
lbe_2
0.648
0.561
lbe
M03824_2.00
Drosophila melanogaster
NTAATTRN
NYAATTAN
SELEX
Nitta et al.(2015)
lbe_3
0.648
0.561
lbe
M03825_2.00
Drosophila melanogaster
TAAYRAKN
NMTYRTTA
SELEX
Nitta et al.(2015)
lbe_4
0.648
0.561
lbe
M06510_2.00
Drosophila melanogaster
TAAYNA
TNRTTA
B1H
Mathelier et al.(2014)
MA0231.1
0.648
0.561
lbe
M06299_2.00
Drosophila melanogaster
NHTAAYNA
TNRTTADN
B1H
Zhu et al.(2011)
Lbe_Cell_FBgn0011278
0.648
0.561
lbe
M06300_2.00
Drosophila melanogaster
YTAAYBA
TVRTTAR
B1H
Zhu et al.(2011)
Lbe_SOLEXA_FBgn0011278
0.648
0.561
NEMVEDRAFT_v1g8907
M02154_2.00
Nematostella vectensis
NTAATDRNNN
NNNYHATTAN
PBM
Weirauch et al.(2014)
pTH6483
0.646
0.561
Nanog
M02098_2.00
Mus musculus
NHDAYNDNN
NNHNRTHDN
PBM
Weirauch et al.(2014)
pTH5685
0.646
0.474
Nanog
M09176_2.00
Mus musculus
HTYWRMAWNWSAAWRVV
BBYWTTSWNWTKYWRAD
Misc
Kulakovskiy et al.(2013)
NANOG_MOUSE.H11MO.0.A
0.646
0.474
Nanog
M09565_2.00
Mus musculus
BYTRATKGSY
RSCMATYARV
Misc
Heinz et al.(2010)
mES-Nanog_GSE11724
0.646
0.474
HOXB1
M05057_2.00
Homo sapiens
NTAATTAS
STAATTAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_HT-SELEX
0.645
0.491
HOXB1
M05058_2.00
Homo sapiens
GTAATBAN
NTVATTAC
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_1
0.645
0.491
HOXB1
M05059_2.00
Homo sapiens
NTRAYGMB
VKCRTYAN
SELEX
Yin et al.(2017)
HOXB1_eDBD_Methyl-HT-SELEX_2
0.645
0.491
lab
M03797_2.00
Drosophila melanogaster
NTAATTAS
STAATTAN
SELEX
Nitta et al.(2015)
lab_1
0.644
0.509
lab
M06493_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Mathelier et al.(2014)
MA0230.1
0.644
0.509
lab
M06260_2.00
Drosophila melanogaster
TTAATKA
TMATTAA
B1H
Zhu et al.(2011)
Lab_Cell_FBgn0002522
0.644
0.509
lab
M06261_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Lab_SOLEXA_FBgn0002522
0.644
0.509
NANOG
M05015_2.00
Homo sapiens
NYRABBVB
VBVVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_HT-SELEX
0.641
0.456
NANOG
M09139_2.00
Homo sapiens
NTYWRCATNWSAAWRVN
NBYWTTSWNATGYWRAN
Misc
Kulakovskiy et al.(2013)
NANOG_HUMAN.H11MO.0.A
0.641
0.456
NANOG
M10664_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_01
0.641
0.456
NANOG
M10665_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_02
0.641
0.456
NANOG
M10666_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_05
0.641
0.456
NANOG
M10667_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_07
0.641
0.456
NANOG
M10668_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q3
0.641
0.456
NANOG
M10669_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NANOG_Q6
0.641
0.456
NANOG
M05016_2.00
Homo sapiens
NHAAYGH
DCRTTDN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_1
0.641
0.456
NANOG
M05017_2.00
Homo sapiens
NYRABKRN
NYMVTYRN
SELEX
Yin et al.(2017)
NANOG_eDBD_Methyl-HT-SELEX_2
0.641
0.456
ENSCING00000016045
M02078_2.00
Ciona intestinalis
NNYTAATTRGN
NCYAATTARNN
PBM
Weirauch et al.(2014)
pTH6551
0.639
0.439
O76842_CUPSA
M02199_2.00
Cupiennius salei
TTAATTAB
VTAATTAA
PBM
Weirauch et al.(2014)
pTH6251
0.639
0.509
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB
VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.637
0.596
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN
NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.637
0.596
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN
NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.637
0.596
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN
NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.637
0.596
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV
BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.637
0.596
ems
M06484_2.00
Drosophila melanogaster
HTAATKR
YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.637
0.596
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR
YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.637
0.596
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM
KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.637
0.596
ems
M06235_2.00
Drosophila melanogaster
YTAATKA
TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.637
0.596
ems
M09676_2.00
Drosophila melanogaster
WTWATGA
TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.637
0.596
E5
M03814_2.00
Drosophila melanogaster
STAATKNN
NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.637
0.579
E5
M06507_2.00
Drosophila melanogaster
BTAATKA
TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.637
0.579
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA
TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.637
0.579
E5
M06294_2.00
Drosophila melanogaster
NTAATDR
YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.637
0.579
ESX1
M00292_2.00
Homo sapiens
NNTAATNDN
NHNATTANN
PBM
Barrera et al.(2016)
ESX1_REF
0.631
0.491
ESX1
M03137_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_1
0.631
0.491
ESX1
M03138_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
ESX1_2
0.631
0.491
ESX1
M05087_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_HT-SELEX
0.631
0.491
ESX1
M05089_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_HT-SELEX
0.631
0.491
ESX1
M05088_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_eDBD_Methyl-HT-SELEX
0.631
0.491
ESX1
M05090_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
ESX1_FL_Methyl-HT-SELEX
0.631
0.491
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN
NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.627
0.544
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH
DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.627
0.544
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN
NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.627
0.544
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG
CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.627
0.544
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN
NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.627
0.544
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN
NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.627
0.544
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN
NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.627
0.544
Dr
M00555_2.00
Drosophila melanogaster
TAATTRNN
NNYAATTA
PBM
Busser et al.(2012a)
Msh
0.625
0.526
Dr
M06482_2.00
Drosophila melanogaster
TAATTGS
SCAATTA
B1H
Mathelier et al.(2014)
MA0188.1
0.625
0.526
Dr
M06229_2.00
Drosophila melanogaster
TAATTGSHB
VDSCAATTA
B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492
0.625
0.526
Dr
M06230_2.00
Drosophila melanogaster
TAATTR
YAATTA
B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492
0.625
0.526
MSX2
M00290_2.00
Homo sapiens
WDATNDNN
NNHNATHW
PBM
Barrera et al.(2016)
MSX2_REF
0.625
0.509
Msx2
M00414_2.00
Mus musculus
HRATKRNN
NNYMATYD
PBM
Berger et al.(2008)
Msx2_3449
0.625
0.509
Msx3
M00429_2.00
Mus musculus
TAATKDNN
NNHMATTA
PBM
Berger et al.(2008)
Msx3_3206
0.625
0.509
Msx1
M00501_2.00
Mus musculus
NHDATND
HNATHDN
PBM
Berger et al.(2008)
Msx1_3031
0.625
0.509
MSX1
M03184_2.00
Homo sapiens
TAATTRBHHNHTAATTRN
NYAATTADNDDVYAATTA
SELEX
Jolma et al.(2013)
MSX1_1
0.625
0.509
MSX1
M03185_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_2
0.625
0.509
MSX1
M03186_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_3
0.625
0.509
MSX2
M03127_2.00
Homo sapiens
TAATTRBHWKWTAATTGV
BCAATTAWMWDVYAATTA
SELEX
Jolma et al.(2013)
MSX2_1
0.625
0.509
MSX2
M03128_2.00
Homo sapiens
NTAATTGB
VCAATTAN
SELEX
Jolma et al.(2013)
MSX2_2
0.625
0.509
Msx3
M03255_2.00
Mus musculus
TAATTGSHHNNTAATTRN
NYAATTANNDDSCAATTA
SELEX
Jolma et al.(2013)
Msx3_1
0.625
0.509
Msx3
M03256_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Msx3_2
0.625
0.509
MSX1
M05221_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX
0.625
0.509
MSX1
M05224_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX
0.625
0.509
MSX2
M05060_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX
0.625
0.509
MSX1
M10715_2.00
Homo sapiens
HNBTWWNTG
CANWWAVND
Transfac
Matys et al.(2006)
V$MSX1_01
0.625
0.509
MSX1
M10716_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5_01
0.625
0.509
MSX1
M10717_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5
0.625
0.509
MSX2
M10677_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q3
0.625
0.509
MSX2
M10678_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q6
0.625
0.509
MSX2
M00288_2.00
Homo sapiens
NTAATNDN
NHNATTAN
PBM
Barrera et al.(2016)
MSX2_P148H
0.625
0.509
MSX1
M05222_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1
0.625
0.509
MSX1
M05223_2.00
Homo sapiens
NTWAYGMB
VKCRTWAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2
0.625
0.509
MSX1
M05225_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1
0.625
0.509
MSX1
M05226_2.00
Homo sapiens
NTWAYGWB
VWCRTWAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2
0.625
0.509
MSX2
M05061_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1
0.625
0.509
MSX2
M05062_2.00
Homo sapiens
NTAAYGAB
VTCRTTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2
0.625
0.509
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN
NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.624
0.561
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN
NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.624
0.561
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS
SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.624
0.561
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.624
0.561
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN
NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.624
0.561
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN
NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.624
0.561
NEMVEDRAFT_v1g164989
M02148_2.00
Nematostella vectensis
YTAATTAG
CTAATTAR
PBM
Weirauch et al.(2014)
pTH5994
0.624
0.474
CG9876
M03865_2.00
Drosophila melanogaster
SVTVATBRSN
NSYVATBABS
SELEX
Nitta et al.(2015)
CG9876_1
0.622
0.474
CG9876
M03866_2.00
Drosophila melanogaster
NTAATTRV
BYAATTAN
SELEX
Nitta et al.(2015)
CG9876_2
0.622
0.474
CG9876
M03867_2.00
Drosophila melanogaster
TAATYTAATTA
TAATTARATTA
SELEX
Nitta et al.(2015)
CG9876_3
0.622
0.474
CG9876
M03868_2.00
Drosophila melanogaster
TAATTRVNTAATTR
YAATTANBYAATTA
SELEX
Nitta et al.(2015)
CG9876_4
0.622
0.474
CG9876
M06537_2.00
Drosophila melanogaster
BTAATTR
YAATTAV
B1H
Mathelier et al.(2014)
MA0184.1
0.622
0.474
CG9876
M06350_2.00
Drosophila melanogaster
DBTAATTR
YAATTAVH
B1H
Zhu et al.(2011)
CG9876_Cell_FBgn0034821
0.622
0.474
CG9876
M06351_2.00
Drosophila melanogaster
HTAATTR
YAATTAD
B1H
Zhu et al.(2011)
CG9876_SOLEXA_FBgn0034821
0.622
0.474
Prrx2
M00486_2.00
Mus musculus
WRATNNN
NNNATYW
PBM
Berger et al.(2008)
Prrx2_3072
0.622
0.456
PRRX2
M03200_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX2_1
0.622
0.456
Prrx2
M03277_2.00
Mus musculus
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
Prrx2_1
0.622
0.456
PRRX2
M05262_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_HT-SELEX
0.622
0.456
PRRX2
M05258_2.00
Homo sapiens
NTNAYGHN
NDCRTNAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_1
0.622
0.456
PRRX2
M05259_2.00
Homo sapiens
NTAATTRV
BYAATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_HT-SELEX_2
0.622
0.456
PRRX2
M09156_2.00
Homo sapiens
HTAATTR
YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_HUMAN.H11MO.0.C
0.622
0.456
Prrx2
M09207_2.00
Mus musculus
HTAATTR
YAATTAD
Misc
Kulakovskiy et al.(2013)
PRRX2_MOUSE.H11MO.0.C
0.622
0.456
PRRX2
M10735_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRRX2_05
0.622
0.456
PRRX2
M10776_2.00
Sus scrofa
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PRX2_Q2
0.622
0.456
Prrx2
M10767_2.00
Mus musculus
HNVHTAATTRRNHNDW
WHNDNYYAATTADBND
Transfac
Matys et al.(2006)
V$S8_01
0.622
0.456
PRRX2
M05260_2.00
Homo sapiens
NTAAYGHN
NDCRTTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_1
0.622
0.456
PRRX2
M05261_2.00
Homo sapiens
NTAATYRN
NYRATTAN
SELEX
Yin et al.(2017)
PRRX2_eDBD_Methyl-HT-SELEX_2
0.622
0.456
PRRX2
M05263_2.00
Homo sapiens
NTAATTRR
YYAATTAN
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_1
0.622
0.456
PRRX2
M05264_2.00
Homo sapiens
HTAAYGHN
NDCRTTAD
SELEX
Yin et al.(2017)
PRRX2_FL_Methyl-HT-SELEX_2
0.622
0.456
Prrx1
M00431_2.00
Mus musculus
TAATTRNN
NNYAATTA
PBM
Berger et al.(2008)
Prrx1_3442
0.622
0.439
PRRX1
M03120_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_1
0.622
0.439
PRRX1
M03121_2.00
Homo sapiens
NTAATTRN
NYAATTAN
SELEX
Jolma et al.(2013)
PRRX1_2
0.622
0.439
PRRX1
M03122_2.00
Homo sapiens
TAATTVRRTTA
TAAYYBAATTA
SELEX
Jolma et al.(2013)
PRRX1_3
0.622
0.439
Prrx1
M10770_2.00
Rattus norvegicus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_01
0.622
0.439
PRRX1
M10675_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PMX1_Q6
0.622
0.439
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.622
0.509
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.622
0.509
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.622
0.509
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.622
0.509
inv
M06491_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Mathelier et al.(2014)
MA0229.1
0.621
0.474
inv
M06255_2.00
Drosophila melanogaster
DYTAATTR
YAATTARH
B1H
Zhu et al.(2011)
Inv_Cell_FBgn0001269
0.621
0.474
inv
M06256_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_2_FBgn0001269
0.621
0.474
inv
M06257_2.00
Drosophila melanogaster
NHTAATTRV
BYAATTADN
B1H
Zhu et al.(2011)
inv_SOLEXA_5_FBgn0001269
0.621
0.474
Hoxd1
M00492_2.00
Mus musculus
NRATNDNN
NNHNATYN
PBM
Berger et al.(2008)
Hoxd1_3448
0.618
0.456
Hoxd1
M10768_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD1_03
0.618
0.456
MIXL1
M03231_2.00
Homo sapiens
NNTAATTRNN
NNYAATTANN
SELEX
Jolma et al.(2013)
MIXL1_1
0.617
0.421
MIXL1
M05359_2.00
Homo sapiens
TAATBNVATTA
TAATBNVATTA
SELEX
Yin et al.(2017)
MIXL1_FL_HT-SELEX
0.617
0.421
MIXL1
M10747_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIXL1_02
0.617
0.421
MIXL1
M05360_2.00
Homo sapiens
TAATYNRATTA
TAATYNRATTA
SELEX
Yin et al.(2017)
MIXL1_FL_Methyl-HT-SELEX_1
0.617
0.421
MIXL1
M05361_2.00
Homo sapiens
TAATYDCRTTA
TAAYGHRATTA